BLASTX nr result

ID: Coptis23_contig00006855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006855
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...   119   2e-25
gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like s...   111   5e-23
ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinas...   111   5e-23
sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like...   111   5e-23
ref|NP_001117479.1| Leucine-rich repeat transmembrane protein ki...   111   5e-23

>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/82 (69%), Positives = 67/82 (81%)
 Frame = -1

Query: 248 TSTNNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDI 69
           TSTN+S  N+Y TAR+AP SLKYYG CLR+GSYNVKLHFAEI +  DQ  ++LG RIFDI
Sbjct: 464 TSTNSSIPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLGERIFDI 523

Query: 68  YIQGERIWKDFNIAEEAGGVGK 3
            IQG+ + KDFNI E+AGGVGK
Sbjct: 524 SIQGKLVQKDFNIMEKAGGVGK 545


>gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like serine/threonine kinase from
           Arabidopsis thaliana gb|AF024648 and contains multiple
           leucine rich PF|00560 repeats and protein kinase
           PF|00069 domain. ESTs gb|T04455, gb|N38129 come from
           this gene [Arabidopsis thaliana]
          Length = 942

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -1

Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60
           N S    Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ  N+LGRRIFDIY+Q
Sbjct: 375 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 434

Query: 59  GERIWKDFNIAEEAGGVGK 3
           G  + +DFNIAE AGGVGK
Sbjct: 435 GNLLERDFNIAERAGGVGK 453


>ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis
           thaliana] gi|332194818|gb|AEE32939.1| Leucine-rich
           repeat transmembrane protein kinase [Arabidopsis
           thaliana]
          Length = 1030

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -1

Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60
           N S    Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ  N+LGRRIFDIY+Q
Sbjct: 463 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 522

Query: 59  GERIWKDFNIAEEAGGVGK 3
           G  + +DFNIAE AGGVGK
Sbjct: 523 GNLLERDFNIAERAGGVGK 541


>sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein
           kinase At1g53430; Flags: Precursor
           gi|224589438|gb|ACN59253.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
          Length = 1038

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -1

Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60
           N S    Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ  N+LGRRIFDIY+Q
Sbjct: 471 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 530

Query: 59  GERIWKDFNIAEEAGGVGK 3
           G  + +DFNIAE AGGVGK
Sbjct: 531 GNLLERDFNIAERAGGVGK 549


>ref|NP_001117479.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis
           thaliana] gi|332194819|gb|AEE32940.1| Leucine-rich
           repeat transmembrane protein kinase [Arabidopsis
           thaliana]
          Length = 997

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -1

Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60
           N S    Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ  N+LGRRIFDIY+Q
Sbjct: 430 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 489

Query: 59  GERIWKDFNIAEEAGGVGK 3
           G  + +DFNIAE AGGVGK
Sbjct: 490 GNLLERDFNIAERAGGVGK 508


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