BLASTX nr result
ID: Coptis23_contig00006855
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00006855 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine... 119 2e-25 gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like s... 111 5e-23 ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinas... 111 5e-23 sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like... 111 5e-23 ref|NP_001117479.1| Leucine-rich repeat transmembrane protein ki... 111 5e-23 >ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440-like [Cucumis sativus] gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440-like [Cucumis sativus] Length = 1012 Score = 119 bits (299), Expect = 2e-25 Identities = 57/82 (69%), Positives = 67/82 (81%) Frame = -1 Query: 248 TSTNNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDI 69 TSTN+S N+Y TAR+AP SLKYYG CLR+GSYNVKLHFAEI + DQ ++LG RIFDI Sbjct: 464 TSTNSSIPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLGERIFDI 523 Query: 68 YIQGERIWKDFNIAEEAGGVGK 3 IQG+ + KDFNI E+AGGVGK Sbjct: 524 SIQGKLVQKDFNIMEKAGGVGK 545 >gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like serine/threonine kinase from Arabidopsis thaliana gb|AF024648 and contains multiple leucine rich PF|00560 repeats and protein kinase PF|00069 domain. ESTs gb|T04455, gb|N38129 come from this gene [Arabidopsis thaliana] Length = 942 Score = 111 bits (278), Expect = 5e-23 Identities = 52/79 (65%), Positives = 62/79 (78%) Frame = -1 Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60 N S Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ N+LGRRIFDIY+Q Sbjct: 375 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 434 Query: 59 GERIWKDFNIAEEAGGVGK 3 G + +DFNIAE AGGVGK Sbjct: 435 GNLLERDFNIAERAGGVGK 453 >ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194818|gb|AEE32939.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] Length = 1030 Score = 111 bits (278), Expect = 5e-23 Identities = 52/79 (65%), Positives = 62/79 (78%) Frame = -1 Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60 N S Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ N+LGRRIFDIY+Q Sbjct: 463 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 522 Query: 59 GERIWKDFNIAEEAGGVGK 3 G + +DFNIAE AGGVGK Sbjct: 523 GNLLERDFNIAERAGGVGK 541 >sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53430; Flags: Precursor gi|224589438|gb|ACN59253.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] Length = 1038 Score = 111 bits (278), Expect = 5e-23 Identities = 52/79 (65%), Positives = 62/79 (78%) Frame = -1 Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60 N S Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ N+LGRRIFDIY+Q Sbjct: 471 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 530 Query: 59 GERIWKDFNIAEEAGGVGK 3 G + +DFNIAE AGGVGK Sbjct: 531 GNLLERDFNIAERAGGVGK 549 >ref|NP_001117479.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194819|gb|AEE32940.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] Length = 997 Score = 111 bits (278), Expect = 5e-23 Identities = 52/79 (65%), Positives = 62/79 (78%) Frame = -1 Query: 239 NNSAENLYSTARIAPFSLKYYGRCLRQGSYNVKLHFAEIRFARDQRNNTLGRRIFDIYIQ 60 N S Y TAR++P SLKYYG CLR+GSY ++LHFAEI F+ DQ N+LGRRIFDIY+Q Sbjct: 430 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGRRIFDIYVQ 489 Query: 59 GERIWKDFNIAEEAGGVGK 3 G + +DFNIAE AGGVGK Sbjct: 490 GNLLERDFNIAERAGGVGK 508