BLASTX nr result

ID: Coptis23_contig00006849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006849
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90281.1| nucleotide-binding site leucine-rich repeat prote...   122   2e-26
ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichoca...   121   7e-26
ref|XP_002532127.1| leucine-rich repeat containing protein, puta...   120   1e-25
ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichoca...   117   8e-25
ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trich...   117   8e-25

>gb|AFC90281.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 296

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/82 (68%), Positives = 70/82 (85%)
 Frame = -1

Query: 247 KTTLAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNACDLEELDPLQCRL 68
           KTTLA+LVYN+ RVK HF++R+WVCVS+DFDIKRLT A++ SI G  C++  LDPLQ RL
Sbjct: 5   KTTLAKLVYNDMRVKGHFDLRLWVCVSDDFDIKRLTGAIVESIEGGPCNITNLDPLQRRL 64

Query: 67  QKQLAGKRYLLVLDDVWNENQE 2
           Q++L+G+RYLLVLDDVWNE  E
Sbjct: 65  QEKLSGRRYLLVLDDVWNEYHE 86


>ref|XP_002302930.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844656|gb|EEE82203.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1088

 Score =  121 bits (303), Expect = 7e-26
 Identities = 52/79 (65%), Positives = 71/79 (89%)
 Frame = -1

Query: 247 KTTLAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNACDLEELDPLQCRL 68
           KTTL+Q+VYNE+RVK+ F +RIWVCVS DFD++RLT+A+I SI G +CD++ELDPLQ RL
Sbjct: 200 KTTLSQMVYNEERVKQQFSLRIWVCVSTDFDVRRLTRAIIESIDGTSCDVQELDPLQQRL 259

Query: 67  QKQLAGKRYLLVLDDVWNE 11
           Q++L GK++LLVLDD+W++
Sbjct: 260 QQKLTGKKFLLVLDDMWDD 278


>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223528186|gb|EEF30247.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1142

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/95 (61%), Positives = 73/95 (76%)
 Frame = -1

Query: 286 VSTCPXXXXXXXGKTTLAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNA 107
           VS  P       GKTTLAQLVYN++RVK HF++RIWVCVS +FD++RL K +I S SGNA
Sbjct: 166 VSVYPIIGMGGLGKTTLAQLVYNDERVKRHFDLRIWVCVSGEFDVRRLVKTIIESASGNA 225

Query: 106 CDLEELDPLQCRLQKQLAGKRYLLVLDDVWNENQE 2
           C   +LDPLQ +LQ+ L+GKRYL+VLD VWN +Q+
Sbjct: 226 CPCLDLDPLQRQLQEILSGKRYLIVLDHVWNGDQD 260


>ref|XP_002302929.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844655|gb|EEE82202.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1063

 Score =  117 bits (294), Expect = 8e-25
 Identities = 54/79 (68%), Positives = 69/79 (87%)
 Frame = -1

Query: 247 KTTLAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNACDLEELDPLQCRL 68
           KTTLAQLVYNE+ V++ F +RIWVCVS DFD+KRLT+A+I SI G +CDL+ELDPLQ  L
Sbjct: 166 KTTLAQLVYNEEIVRQQFSLRIWVCVSTDFDVKRLTRAIIESIDGASCDLQELDPLQRCL 225

Query: 67  QKQLAGKRYLLVLDDVWNE 11
           Q++L GK++LLVLDDVW++
Sbjct: 226 QQKLNGKKFLLVLDDVWDD 244


>ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844637|gb|EEE82184.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1053

 Score =  117 bits (294), Expect = 8e-25
 Identities = 53/79 (67%), Positives = 68/79 (86%)
 Frame = -1

Query: 247 KTTLAQLVYNEDRVKEHFEVRIWVCVSEDFDIKRLTKAVIASISGNACDLEELDPLQCRL 68
           KTTLAQ+ YNE+RVK+ F +RIWVCVS DFD+ R+TKA+I SI G +CDL+ LDPLQ RL
Sbjct: 201 KTTLAQMAYNEERVKQQFGLRIWVCVSTDFDVGRITKAIIESIDGASCDLQGLDPLQRRL 260

Query: 67  QKQLAGKRYLLVLDDVWNE 11
           Q++L GK++LLVLDDVW++
Sbjct: 261 QQKLTGKKFLLVLDDVWDD 279


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