BLASTX nr result

ID: Coptis23_contig00006832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006832
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB65156.1| basic cellulase [Citrus sinensis]                      185   4e-45
ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]          179   2e-43
ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinif...   178   5e-43
ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabido...   177   1e-42

>gb|AAB65156.1| basic cellulase [Citrus sinensis]
          Length = 488

 Score =  185 bits (469), Expect = 4e-45
 Identities = 84/104 (80%), Positives = 95/104 (91%)
 Frame = +2

Query: 116 GHPNYEDALSKAILFFQGQRSGNLPPDQELTWRSNSGISDGLAAHVDLRGGYYDAGDNVK 295
           G+PNY +AL+K++LFFQGQRSG LP DQ++TWRSNSG+SDGL AHVDL GGYYDAGDNVK
Sbjct: 24  GNPNYREALAKSLLFFQGQRSGRLPKDQQITWRSNSGLSDGLFAHVDLTGGYYDAGDNVK 83

Query: 296 FNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKC 427
           FNFPMAFTTTMLSWSTLEYG +MG +L +AR AIRWATDYLLKC
Sbjct: 84  FNFPMAFTTTMLSWSTLEYGKKMGPELQNARAAIRWATDYLLKC 127


>ref|XP_002329161.1| predicted protein [Populus trichocarpa] gi|222870942|gb|EEF08073.1|
           predicted protein [Populus trichocarpa]
           gi|347466581|gb|AEO97203.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466635|gb|AEO97230.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|429326594|gb|AFZ78637.1| korrigan [Populus tomentosa]
          Length = 481

 Score =  181 bits (460), Expect = 4e-44
 Identities = 84/106 (79%), Positives = 94/106 (88%)
 Frame = +2

Query: 110 IDGHPNYEDALSKAILFFQGQRSGNLPPDQELTWRSNSGISDGLAAHVDLRGGYYDAGDN 289
           +  +PNY+DAL+K+ILFFQGQRSG LP  Q+L WRS+SG+SDGL AHVDL GGYYDAGDN
Sbjct: 21  VHANPNYKDALAKSILFFQGQRSGRLPRSQQLAWRSDSGLSDGLFAHVDLTGGYYDAGDN 80

Query: 290 VKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKC 427
           VKFNFPMAFTTTMLSWSTLEYG RMG +L +AR AIRWATDYLLKC
Sbjct: 81  VKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKC 126


>gb|AAT75042.1| Cel9B [Populus tremula x Populus tremuloides]
          Length = 486

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/106 (78%), Positives = 92/106 (86%)
 Frame = +2

Query: 110 IDGHPNYEDALSKAILFFQGQRSGNLPPDQELTWRSNSGISDGLAAHVDLRGGYYDAGDN 289
           +   PNY +AL+K+ILFFQGQRSG LP  Q+L WRS+SG+SDGL AHVDL GGYYDAGDN
Sbjct: 21  VQAKPNYNEALAKSILFFQGQRSGRLPGSQQLAWRSDSGLSDGLFAHVDLTGGYYDAGDN 80

Query: 290 VKFNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKC 427
           VKFNFPMAFTTTMLSWSTLEYG RMG +L +AR AIRWATDYLLKC
Sbjct: 81  VKFNFPMAFTTTMLSWSTLEYGKRMGPELPNARAAIRWATDYLLKC 126


>ref|XP_002269875.2| PREDICTED: endoglucanase 9-like [Vitis vinifera]
           gi|297734804|emb|CBI17038.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/104 (77%), Positives = 91/104 (87%)
 Frame = +2

Query: 116 GHPNYEDALSKAILFFQGQRSGNLPPDQELTWRSNSGISDGLAAHVDLRGGYYDAGDNVK 295
           GHPNY+DAL+K+ILFFQGQRSG LP  Q+++WRSNSG+SDG  A VDL GGYYDAGDNVK
Sbjct: 30  GHPNYKDALAKSILFFQGQRSGRLPTGQQMSWRSNSGLSDGSLARVDLTGGYYDAGDNVK 89

Query: 296 FNFPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKC 427
           FNFPMAF TTMLSW TLEYG RMG QL ++R AIRWATDYL+KC
Sbjct: 90  FNFPMAFATTMLSWGTLEYGKRMGPQLQNSRAAIRWATDYLIKC 133


>ref|XP_002890540.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336382|gb|EFH66799.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/102 (79%), Positives = 94/102 (92%)
 Frame = +2

Query: 122 PNYEDALSKAILFFQGQRSGNLPPDQELTWRSNSGISDGLAAHVDLRGGYYDAGDNVKFN 301
           PNY +ALSK++LFFQGQRSG LP DQ+L+WRS+SG+SDG +AHVDL GGYYDAGDNVKFN
Sbjct: 24  PNYREALSKSLLFFQGQRSGRLPGDQKLSWRSSSGLSDGSSAHVDLTGGYYDAGDNVKFN 83

Query: 302 FPMAFTTTMLSWSTLEYGGRMGSQLGSARGAIRWATDYLLKC 427
           FPMAFTTTMLSWS+LEYG +MGS+L ++R AIRWATDYLLKC
Sbjct: 84  FPMAFTTTMLSWSSLEYGKKMGSELQNSRVAIRWATDYLLKC 125


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