BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006817
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    80   9e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    79   1e-12
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    74   6e-11
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    71   4e-10
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    70   7e-10

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
 Frame = -3

Query: 1008 TDDSWNALGIELEHHYNGLLYYKGEYYALRFXXXXXXXXXXXGAPLPTASLVASSNKFVF 829
            +DDSW  L  + + +   +++++G +YA+              +P    S++    +F  
Sbjct: 195  SDDSWTFLE-DAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSP--RVSIIEMPQQF-- 249

Query: 828  SRDSFYLVATSSDLLKVTRIYDD-----------FHATQHFLVQKLDFAGTKWLEVESLS 682
              D  YLV +  +LL VTR  D             + T  F V +LD    +W  V SL 
Sbjct: 250  GGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLG 309

Query: 681  NCALFVGVNDSFSVVASDFPGCKENCIYF--------FTG----EDKGVFNLQDGTIQTI 538
            + ALF+G N S S+ + DFPGCK NCIY+        + G    +D G+FNL+DG+I+ +
Sbjct: 310  DRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL 369


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 23/180 (12%)
 Frame = -3

Query: 1008 TDDSWNALGIELEHHYNGLLYYKGEYYALRFXXXXXXXXXXXGAPLPTASLVASSNKFVF 829
            +DDSW  L  + + +   +++++G +YA+              +P    S++    +F  
Sbjct: 195  SDDSWTFLE-DAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSP--RVSIIEMPQQF-- 249

Query: 828  SRDSFYLVATSSDLLKVTRIYDD-----------FHATQHFLVQKLDFAGTKWLEVESLS 682
              D  YLV +  +LL VTR  D             + T  F V +LD    +W  V SL 
Sbjct: 250  GGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLG 309

Query: 681  NCALFVGVNDSFSVVASDFPGCKENCIYF--------FTG----EDKGVFNLQDGTIQTI 538
            + ALF+G N S S+ + DFPGCK NCIY+        + G    +D G+FNL+DG+I+ +
Sbjct: 310  DRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPL 369


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 54/153 (35%), Positives = 74/153 (48%), Gaps = 17/153 (11%)
 Frame = -3

Query: 954 LLYYKGEYYALRFXXXXXXXXXXXGAPLPTASLVASSNKFVFSRDSFYLVATSSDLLKVT 775
           L+++ GE+YA+                 P  SL+A S   VF  D   LV ++ +LL V 
Sbjct: 202 LIFFNGEFYAI---DNTGRTVVVAIGSPPVLSLIADS---VFGGDKKSLVESNGELLMVD 255

Query: 774 R-----IYDDFHATQHFLVQKLDFAGTKWLEVESLSNCALFVGVNDSFSVVASDFPGCKE 610
                 I+        F V KLD  G  W+EVESL N  LF+G   +FS VAS+F GC+ 
Sbjct: 256 TYFGQGIHRRMKRAVRFKVFKLDQIGHMWVEVESLGNRILFLGEKSTFSAVASEFCGCEG 315

Query: 609 NCIY----FFTGEDKG--------VFNLQDGTI 547
           NCIY    FF    +G        +FNL++G +
Sbjct: 316 NCIYYTNTFFCPNGQGDNAYTAIDIFNLENGNM 348


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
 Frame = -3

Query: 1029 LFFTRPGTDDSWNALGIELEHH--YNGLLYYKGEYYALRFXXXXXXXXXXXGAPLPTASL 856
            L F R G D SW  L  E E    +  ++ Y G ++A+             G   P  S+
Sbjct: 181  LAFCRNGYD-SWIFLNGEEEEMNCWEDVVNYNGLFFAVSKGGTIAVCDAGEGCFPPRVSI 239

Query: 855  VASSNKFVFSRDSFYLVATSSDLLKVTRIYD-DF-----------HATQHFLVQKLDFAG 712
            + ++  F F+ D  Y V ++ D+L + R+ D DF           + T  F V K+++  
Sbjct: 240  IQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGL 299

Query: 711  TKWLEVESLSNCALFVGVNDSFSVVASDFPGCKENCIYFFTG------------EDKGVF 568
              W  VE+L    LFVG N S S  ASDF GC  +CIYF                D GVF
Sbjct: 300  LTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGKHDLGVF 359

Query: 567  NLQDGTIQTI 538
             L+D +I+ +
Sbjct: 360  RLRDKSIEPL 369


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
 Frame = -3

Query: 954 LLYYKGEYYALRFXXXXXXXXXXXGAPLPTASLVASSNKFVFSRDSFYLVATSSDLLKVT 775
           L+++ GE+YA+                 P  SL+A S   V   +   LV ++ +LL V 
Sbjct: 201 LIFFNGEFYAV---DNTGRTVVVAIGSPPVLSLIADS---VIGGNKKSLVESNGELLMVN 254

Query: 774 RIYDD-----FHATQHFLVQKLDFAGTKWLEVESLSNCALFVGVNDSFSVVASDFPGCKE 610
             +D       +    F V KL+  G  W+EVE+L +  LF+G   +FS VAS+F GC+ 
Sbjct: 255 TYFDQGIHGIMNRAVRFKVFKLNQIGHMWVEVENLGDRILFLGEKSTFSAVASEFCGCEG 314

Query: 609 NCIY----FFTGEDK--------GVFNLQDGTI 547
           NCIY    FF   D+        G+FNL++G +
Sbjct: 315 NCIYYTNSFFFPNDQEDDAYTGIGIFNLENGNL 347