BLASTX nr result

ID: Coptis23_contig00006811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006811
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548513.1| PREDICTED: mitochondrial substrate carrier f...   169   3e-40
ref|XP_003528803.1| PREDICTED: mitochondrial substrate carrier f...   169   3e-40
ref|XP_002302618.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier f...   168   4e-40
emb|CAN60283.1| hypothetical protein VITISV_011983 [Vitis vinifera]   168   4e-40

>ref|XP_003548513.1| PREDICTED: mitochondrial substrate carrier family protein B-like
           [Glycine max]
          Length = 355

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/109 (78%), Positives = 92/109 (84%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           ++ELSV TRL             AYPLDVIRRRMQMVGWN+A+SVLTGDGR K PLEYTG
Sbjct: 242 NSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNHAASVLTGDGRGKVPLEYTG 301

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVE 1
           MIDAFRKTV+HEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE
Sbjct: 302 MIDAFRKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDVLGVE 350



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/106 (29%), Positives = 49/106 (46%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           D +L+   RL              YP+D++R R+ +                 +P +Y G
Sbjct: 139 DAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRITVQ-------------TEASPYQYRG 185

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDIL 10
           M  A    +R EG  ALYKG +P+ + V+P + + F  YE++KD L
Sbjct: 186 MFHALSTVLREEGARALYKGWLPSVIGVIPYVGLNFAVYESLKDYL 231


>ref|XP_003528803.1| PREDICTED: mitochondrial substrate carrier family protein B-like
           [Glycine max]
          Length = 355

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/109 (78%), Positives = 92/109 (84%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           ++ELSV TRL             AYPLDVIRRRMQMVGWN+A+SVLTGDGR K PLEYTG
Sbjct: 242 NSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNHAASVLTGDGRGKVPLEYTG 301

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVE 1
           M+DAFRKTV+HEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVE
Sbjct: 302 MVDAFRKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVE 350


>ref|XP_002302618.1| predicted protein [Populus trichocarpa] gi|222844344|gb|EEE81891.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  169 bits (427), Expect = 3e-40
 Identities = 86/109 (78%), Positives = 92/109 (84%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           D+EL+V TRL             AYPLDVIRRRMQMVGW  A+S++TGDGRSKAPLEYTG
Sbjct: 241 DSELNVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKGAASIVTGDGRSKAPLEYTG 300

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVE 1
           MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGV+
Sbjct: 301 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVQ 349



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/106 (31%), Positives = 50/106 (47%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           D +L+   RL              YPLD++R R+ +                K+P +Y G
Sbjct: 138 DAQLTPLLRLGAGACAGIIAMSATYPLDMVRGRLTVQ-------------TEKSPHQYRG 184

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDIL 10
           M  A    +R EG  ALYKG +P+ + V+P + + F  YE++KD L
Sbjct: 185 MFHALSTVLRQEGPRALYKGWLPSVIGVIPYVGLNFSVYESLKDWL 230


>ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis
           vinifera] gi|297742308|emb|CBI34457.3| unnamed protein
           product [Vitis vinifera]
          Length = 354

 Score =  168 bits (426), Expect = 4e-40
 Identities = 86/109 (78%), Positives = 91/109 (83%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           D+EL V TRL             AYPLDVIRRRMQMVGW +A+SV+TGDGR KAPLEYTG
Sbjct: 241 DSELGVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVTGDGRGKAPLEYTG 300

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVE 1
           M+DAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVE
Sbjct: 301 MVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVE 349


>emb|CAN60283.1| hypothetical protein VITISV_011983 [Vitis vinifera]
          Length = 340

 Score =  168 bits (426), Expect = 4e-40
 Identities = 86/109 (78%), Positives = 91/109 (83%)
 Frame = -1

Query: 327 DTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYTG 148
           D+EL V TRL             AYPLDVIRRRMQMVGW +A+SV+TGDGR KAPLEYTG
Sbjct: 227 DSELGVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVTGDGRGKAPLEYTG 286

Query: 147 MIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVE 1
           M+DAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVE
Sbjct: 287 MVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVE 335


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