BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006807
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   113   3e-23
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   112   6e-23
ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R...   110   4e-22
ref|NP_001048584.1| Os02g0826100 [Oryza sativa Japonica Group] g...   109   5e-22
ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   109   6e-22

>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  113 bits (283), Expect = 3e-23
 Identities = 53/74 (71%), Positives = 66/74 (89%)
 Frame = +3

Query: 342 DALVNMDCSIKEAAYHA*LGYYNSIKEIGRDKTTLVELASRFCDSIGLHKSPALFRKMAV 521
           +++  +D S+KE AYHA LGYYNSI+EIGRDKTTLVELA++F +SIGLHK P+LFRK A+
Sbjct: 725 ESMSKIDSSVKEGAYHAWLGYYNSIREIGRDKTTLVELANQFSESIGLHKPPSLFRKTAL 784

Query: 522 KMGLRDIPGIRIRK 563
           KMGL+DIPGIRIR+
Sbjct: 785 KMGLKDIPGIRIRR 798


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score =  112 bits (281), Expect = 6e-23
 Identities = 53/73 (72%), Positives = 65/73 (89%)
 Frame = +3

Query: 342 DALVNMDCSIKEAAYHA*LGYYNSIKEIGRDKTTLVELASRFCDSIGLHKSPALFRKMAV 521
           D++  +D S+KEAAYHA LGYYNSI++IGRDKTTLVELA+RFC+SIGL + P LFRK A+
Sbjct: 698 DSMSKIDSSVKEAAYHAWLGYYNSIRKIGRDKTTLVELANRFCESIGLQRPPPLFRKTAL 757

Query: 522 KMGLRDIPGIRIR 560
           KMGL++IPGIRIR
Sbjct: 758 KMGLKNIPGIRIR 770


>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Glycine max]
          Length = 707

 Score =  110 bits (274), Expect = 4e-22
 Identities = 52/74 (70%), Positives = 64/74 (86%)
 Frame = +3

Query: 342 DALVNMDCSIKEAAYHA*LGYYNSIKEIGRDKTTLVELASRFCDSIGLHKSPALFRKMAV 521
           +++  +D  IKEAAYHA LGYYNSI+EIGR+KTT+ ELA+RF +SIGL + PALFRK A+
Sbjct: 634 NSMAKIDNDIKEAAYHAWLGYYNSIREIGREKTTMAELANRFSESIGLQRPPALFRKTAI 693

Query: 522 KMGLRDIPGIRIRK 563
           KMGL+DIPGIRIRK
Sbjct: 694 KMGLKDIPGIRIRK 707


>ref|NP_001048584.1| Os02g0826100 [Oryza sativa Japonica Group]
           gi|75324058|sp|Q6K7R9.1|RH48_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 48
           gi|48716436|dbj|BAD23043.1| putative ATP-dependent RNA
           helicase [Oryza sativa Japonica Group]
           gi|113538115|dbj|BAF10498.1| Os02g0826100 [Oryza sativa
           Japonica Group] gi|218197440|gb|EEC79867.1| hypothetical
           protein OsI_21363 [Oryza sativa Indica Group]
           gi|222623956|gb|EEE58088.1| hypothetical protein
           OsJ_08955 [Oryza sativa Japonica Group]
          Length = 811

 Score =  109 bits (273), Expect = 5e-22
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +3

Query: 357 MDCSIKEAAYHA*LGYYNSIKEIGRDKTTLVELASRFCDSIGLHKSPALFRKMAVKMGLR 536
           +D SIKEAAYHA LGYYNSI ++GRDKT LV+LA+RFC SIGL K PAL+RK A+KMGL+
Sbjct: 743 VDMSIKEAAYHAWLGYYNSIGDVGRDKTMLVDLANRFCKSIGLEKPPALYRKTALKMGLK 802

Query: 537 DIPGIRIRK 563
           D+PGIRIRK
Sbjct: 803 DVPGIRIRK 811


>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score =  109 bits (272), Expect = 6e-22
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = +3

Query: 357 MDCSIKEAAYHA*LGYYNSIKEIGRDKTTLVELASRFCDSIGLHKSPALFRKMAVKMGLR 536
           +D S+KEAAYHA LGYYNSI+E GRDKTTLVELA++FC+SIGL K P LFRK A+KMGL+
Sbjct: 686 IDTSVKEAAYHAWLGYYNSIRETGRDKTTLVELANQFCESIGLQKPPLLFRKTALKMGLK 745

Query: 537 DIPGIRIRK 563
            IPGIRIR+
Sbjct: 746 GIPGIRIRR 754