BLASTX nr result
ID: Coptis23_contig00006799
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00006799
(1648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro... 418 e-114
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2... 345 2e-92
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2... 344 4e-92
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm... 334 4e-89
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro... 318 3e-84
>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
vinifera]
Length = 663
Score = 418 bits (1074), Expect = e-114
Identities = 242/437 (55%), Positives = 284/437 (64%), Gaps = 12/437 (2%)
Frame = -1
Query: 1474 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 1295
TMKDHI ++ S NKKP GRDLK+IAGSFW AASVF
Sbjct: 238 TMKDHIDLD---SQNKKPPGRDLKEIAGSFWSAASVFSKKLQKWRRKQKMKKRDNGGGS- 293
Query: 1294 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 1139
A + V+KP SEIADYG+GRRS D DPRFSLDAGR+SFDDPR S+D PRASW
Sbjct: 294 -ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASW 352
Query: 1138 DGYLTGRTLSRVPPPMVSLGEHVPISVPRFDNLIPVEEPRISVTEEATTTPGGSAQTRDY 959
DGYL GRT R+PP MVS+ E P+ V R DN IPVEEPR S E + PGGSAQTRDY
Sbjct: 353 DGYLIGRTFPRLPP-MVSVVEDAPVPVQRSDNQIPVEEPRNSSVNEDESIPGGSAQTRDY 411
Query: 958 YXXXXXXXXXXXXXXXXSNSIRKKAAAVVAELDEAKLVSNAKVSPPVLDPFLGTKLLVGD 779
Y NSIRK AAAVVA+LDE+K VSNAKVSP +D F G KL+ D
Sbjct: 412 YSDSSSRRRKSLDRS---NSIRKTAAAVVADLDESKSVSNAKVSPATIDYFHGPKLIPAD 468
Query: 778 KDLRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIYRRGG 599
KDLR+ S+S+RDDCSE+FE AFRD ASVTG E KAWNIWG I+RR G
Sbjct: 469 KDLRDSNSNSLRDDCSETFEMAFRDAASVTGNG-ERKGSKKSSRWSKAWNIWGFIHRRSG 527
Query: 598 SKDEDEDRYSR---VERSFSESWPELRREPLNGDAKGA-XXXXXXXXXXXXXXXSYNMSG 431
+KDED+DR+SR VERS SESWPELR E NGD +GA S+ M G
Sbjct: 528 TKDEDDDRFSRVNGVERSLSESWPELRGE-RNGDVRGAFNRKVFRSNSSVSSRNSFTMGG 586
Query: 430 SFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTPMRSGRRNGSGK 251
SF+S+R+++AE+ E++L+RNRS RYS N+IDNGLLRFYLTP+RS RR GSGK
Sbjct: 587 SFSSTRKSSAESNGHGKKRRDEFVLERNRSARYSPNNIDNGLLRFYLTPLRSSRRGGSGK 646
Query: 250 SAPKSSHTLANSALRMY 200
+ P +SH++A S LR+Y
Sbjct: 647 TRPSNSHSIARSVLRLY 663
>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
predicted protein [Populus trichocarpa]
Length = 628
Score = 345 bits (885), Expect = 2e-92
Identities = 215/443 (48%), Positives = 263/443 (59%), Gaps = 18/443 (4%)
Frame = -1
Query: 1474 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 1295
TMKDHI ++ S +KK SGRD K+IAGSFW AASVF
Sbjct: 213 TMKDHIDLD---SQSKKTSGRDFKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRNDGPGS 269
Query: 1294 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 1139
A + V+KP SEIADYG+GRRS D DPRFSLDAGR+SFDDPR S+D PRASW
Sbjct: 270 -ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASW 328
Query: 1138 DGYLTGRTLSRVPPPMVSLGEHVPISVP-RFDNLIPVEE-PRISVT--EEATTTPGGSAQ 971
DGYL GRT R+ P MVS+ E P++V R D IPVEE PRIS+ E PGGSAQ
Sbjct: 329 DGYLIGRTFPRM-PTMVSVVEDAPVNVVLRSDTQIPVEEPPRISMNSINEDEAVPGGSAQ 387
Query: 970 TRDYYXXXXXXXXXXXXXXXXSNSIRKKAAAVVAELDEAKLVSNAKVSPPVLDPFLGTKL 791
TRDYY SNSIRK AAAVVAE+DE K L
Sbjct: 388 TRDYY---SDSSSRRRKSLDRSNSIRKTAAAVVAEIDELK------------------AL 426
Query: 790 LVGDKDLRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIY 611
+V D+D R+ S+S+RDDCSE+F+ FRD AS+ GG E KAWNIWG I+
Sbjct: 427 VVPDRDFRDSNSNSLRDDCSETFDMGFRDNASLVGGNGERKGAKKPRRWSKAWNIWGFIH 486
Query: 610 RRGGSKDEDEDRYSR---VERSFSESWPELRREPLNGDAKGA---XXXXXXXXXXXXXXX 449
RR +K++D+DRYSR VERSFSESWPELR E NGD +G
Sbjct: 487 RRSVNKEDDDDRYSRANGVERSFSESWPELRGE-RNGDVRGGFNPKILRSNSSVSWRNSH 545
Query: 448 SYNMSGSFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTPMRSGR 269
++ GSF+S+R+++ ET E++L+RNRS RYS N+++NGLLRFYLTP+R+ R
Sbjct: 546 NFGGGGSFSSARKSSVETNGNGRKKRDEFVLERNRSARYSPNNMENGLLRFYLTPLRNSR 605
Query: 268 RNGSGKSAPKSSHTLANSALRMY 200
RNG GKS + ++A S LR+Y
Sbjct: 606 RNGWGKSKSSQAQSIARSVLRLY 628
>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
predicted protein [Populus trichocarpa]
Length = 686
Score = 344 bits (882), Expect = 4e-92
Identities = 219/448 (48%), Positives = 264/448 (58%), Gaps = 23/448 (5%)
Frame = -1
Query: 1474 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 1295
TMKDHI ++ S +KK SGRDLK+IAGSFW AASVF
Sbjct: 267 TMKDHIDLD---SQSKKTSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRNGGPGS 323
Query: 1294 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 1139
A + V+KP SEIADYG+GRRS D DPRFSLDAGR+SFDDPR S+D PRASW
Sbjct: 324 -ATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASW 382
Query: 1138 DGYLTGRTLSRVPPPMVSLGEHVPIS----VPRFDNLIPVEE-PRISVT-----EEATTT 989
DGYL GRT R+ P MVS+ E P++ V R D IPVEE PRIS+ +E T
Sbjct: 383 DGYLIGRTFPRM-PTMVSVVEDAPVNVVNVVSRSDTQIPVEEPPRISMNSINEDDEDETV 441
Query: 988 PGGSAQTRDYYXXXXXXXXXXXXXXXXSNSIRKKAAAVVAELDEAKLVSNAKVSPPVLDP 809
PGGS QTRDYY SNSIRK AAAVVAE+DE K
Sbjct: 442 PGGSVQTRDYY---SDSSSRRRKSLDRSNSIRKTAAAVVAEIDELK-------------- 484
Query: 808 FLGTKLLVGDKDLRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWN 629
L+V D+D R+ S+S+RDDCSE+F+ FRD ASV G E KAW+
Sbjct: 485 ----ALVVPDRDFRDSNSNSLRDDCSENFDMGFRDNASVVGNG-ERKGVKKPRRWSKAWS 539
Query: 628 IWGLIYRRGGSKDEDEDRYSR---VERSFSESWPELRREPLNGDAKGAXXXXXXXXXXXX 458
IWG I+RR +KDEDEDRYSR VERSFSESWPELR E NGD +G
Sbjct: 540 IWGFIHRRSVNKDEDEDRYSRANGVERSFSESWPELRGE-RNGDVRGGFNPKMLRSNSSV 598
Query: 457 XXXSYNM--SGSFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTP 284
+ + GSF+S+R+++ ET E++L+RNRS RYS N++DNGLLRFYLTP
Sbjct: 599 SWRNSHNFGGGSFSSARKSSVETNGNGRKKRDEFVLERNRSARYSPNNMDNGLLRFYLTP 658
Query: 283 MRSGRRNGSGKSAPKSSHTLANSALRMY 200
+R+ RRNG GKS + ++A S LR+Y
Sbjct: 659 LRNSRRNGWGKSKSSHAQSIARSVLRLY 686
>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
gi|223525005|gb|EEF27813.1| conserved hypothetical
protein [Ricinus communis]
Length = 676
Score = 334 bits (857), Expect = 4e-89
Identities = 216/448 (48%), Positives = 256/448 (57%), Gaps = 24/448 (5%)
Frame = -1
Query: 1471 MKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXXS 1292
MKDHI ++ S KK SGRD K+IAGSFW AASVF
Sbjct: 244 MKDHIDLD---SQTKKGSGRDFKEIAGSFWSAASVFSKKLQKWRQKQKLNNNNKKRRNGG 300
Query: 1291 -ARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 1139
A + V+KP SEIADYG+GRRS D DPRFSLDAGR+SFDD R S+D PRASW
Sbjct: 301 SATLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDSRYSFDEPRASW 360
Query: 1138 DGYLTGRTLSRVPPPMVSLGEHVPISVP-RFDNLIPVEEPRISVTEEATTTPGGSAQTRD 962
DGYL G P M+S+ E P++V R D IPVEEPR S+ E+ T PGGSAQTRD
Sbjct: 361 DGYLIGTRNFPRMPTMLSVVEDAPVNVVLRSDTQIPVEEPRNSIHED-DTLPGGSAQTRD 419
Query: 961 YYXXXXXXXXXXXXXXXXSNSIRKKAAAVVAELDE----AKLVSNAKVSPPVLDPFL--- 803
YY SNSIRK AAAVVAE+DE A ++SN+KVSP +
Sbjct: 420 YY---SDSSSRRRKSLDRSNSIRKTAAAVVAEIDELKSAASVISNSKVSPATTTSTMTAD 476
Query: 802 ----GTKLLVGDKDLRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKA 635
G KL++ D+D N S+S+RDDCSE+FE FRD A G E KA
Sbjct: 477 YYIHGPKLVLPDRD-SNSNSNSLRDDCSETFEMGFRDNAVENG---ERKGAKKSRRWSKA 532
Query: 634 WNIWGLIYRRGGSKDEDEDRYSR---VERSFSESWPELRREPLNGDAKGAXXXXXXXXXX 464
WNIWG I+RR +KDE+EDRYSR VERSFSESWPELR E N
Sbjct: 533 WNIWGFIHRRSVNKDEEEDRYSRGNGVERSFSESWPELRGERNN----NPKILRSNSSVS 588
Query: 463 XXXXXSYNMSGSFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTP 284
+ GSF S+R++ ET E++L+RNRS RYS N+IDNGLLRFYLTP
Sbjct: 589 WRNSNGFGGGGSFGSARKSNVETNGHGRKKKDEFVLERNRSARYSPNNIDNGLLRFYLTP 648
Query: 283 MRSGRRNGSGKSAPKSSHTLANSALRMY 200
MR RR G GKS + ++A S LR+Y
Sbjct: 649 MRGSRRGGWGKSKSSHAQSIARSVLRLY 676
>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
sativus]
Length = 662
Score = 318 bits (815), Expect = 3e-84
Identities = 204/439 (46%), Positives = 252/439 (57%), Gaps = 14/439 (3%)
Frame = -1
Query: 1474 TMKDHIHIEIDSSNNKKPSGRDLKDIAGSFWVAASVFXXXXXXXXXXXXXXXXXXXXXXX 1295
++KDH+ ++ S KKPSGRD K+IAGSFW AASVF
Sbjct: 253 SIKDHMDLD---SQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQKLKKRRNGDIS- 308
Query: 1294 SARMQVDKPF--------SEIADYGYGRRSIDIDPRFSLDAGRMSFDDPRCSWDAPRASW 1139
A + V+KP SEIADYGYGRRS D DPRFSLDAGRMSFDDPR S+D PRASW
Sbjct: 309 -ATLPVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLDAGRMSFDDPRYSFDEPRASW 367
Query: 1138 DGYLTGRTLSRVPPPMVSLGEHVPISVPRFDNLIPVEEPRISVTEEATTTPGGSAQTRDY 959
DGYL RT +R+ P M+S+ E PI V R D IPVEEP S ++ T PGGS QTRDY
Sbjct: 368 DGYLVSRTFTRM-PTMLSVVEDAPIHVSRTDTQIPVEEPANSCNDD-ETVPGGSEQTRDY 425
Query: 958 YXXXXXXXXXXXXXXXXSNSIRKKAAAVVAELDEAKLVSNAKVSPPVLDPFLGTKLLVGD 779
Y S+S+RK AAAVVA++D+ K SNAKVSP D F G KL+V D
Sbjct: 426 Y---SDSSSRRRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSGPKLVVPD 482
Query: 778 KDL-RNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIYRRG 602
L R+ S+S+RDDCSE+FE FR+ + K WNIW IYRR
Sbjct: 483 NKLQRDSNSNSLRDDCSETFEIPFRNG--------DRKETKKSRRWGKGWNIWAFIYRRT 534
Query: 601 GSKDEDEDRYSR----VERSFSESWPELRREPLNGDAKGAXXXXXXXXXXXXXXXSYNMS 434
G+K EDEDRYS V RS SESWPE R E NG+ +G N S
Sbjct: 535 GNKYEDEDRYSSRTNGVTRSLSESWPEFRGE-RNGEVRGIGGMGFNPKMMRS-----NSS 588
Query: 433 GSFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSND-IDNGLLRFYLTPMRSGRRNGS 257
S+ SS+ N+ + +++L+RN+S R+S N+ +DNGLLRFYL PM+ RR G
Sbjct: 589 VSWRSSQSNSGGS-----KKKEDFVLERNQSARFSPNEVVDNGLLRFYLAPMKGSRRGGI 643
Query: 256 GKSAPKSSHTLANSALRMY 200
K+ P + ++A S LR+Y
Sbjct: 644 MKNRPSPAQSIARSVLRLY 662