BLASTX nr result

ID: Coptis23_contig00006796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006796
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263...    62   3e-09
emb|CBI18542.3| unnamed protein product [Vitis vinifera]               62   3e-09
gb|AAD39604.1|AC007454_3 F23M19.3 [Arabidopsis thaliana]               64   2e-08
ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] ...    64   2e-08
ref|XP_002891095.1| hypothetical protein ARALYDRAFT_473586 [Arab...    64   2e-08

>ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263351 [Vitis vinifera]
          Length = 655

 Score = 61.6 bits (148), Expect(2) = 3e-09
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +3

Query: 285 NNIEDGIPRLPRALSNKSRSMKSRPAAVVKVSEMSVLLGKAGTA 416
           ++I+DGIPRL RALS+KSRS KS+  AV KVSE+S LLG+AGTA
Sbjct: 80  DDIDDGIPRLSRALSHKSRSTKSKQVAVAKVSEVSSLLGRAGTA 123



 Score = 24.3 bits (51), Expect(2) = 3e-09
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
 Frame = +1

Query: 1   DNAPSGTFAQPSDLIDQGSHGVQMKKDGVLVPPQV----------GETMEKHVQESFTFA 150
           DNAP G+F   +  +  GS G+  +  G  +PP++          G    K ++E  +  
Sbjct: 12  DNAPGGSFPLANGHLSHGS-GIVYQSRG--LPPELTRNLTASPIGGGMDNKQLREPLSAP 68

Query: 151 EMNTSVYG 174
           EM    YG
Sbjct: 69  EMERVSYG 76


>emb|CBI18542.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 61.6 bits (148), Expect(2) = 3e-09
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +3

Query: 285 NNIEDGIPRLPRALSNKSRSMKSRPAAVVKVSEMSVLLGKAGTA 416
           ++I+DGIPRL RALS+KSRS KS+  AV KVSE+S LLG+AGTA
Sbjct: 80  DDIDDGIPRLSRALSHKSRSTKSKQVAVAKVSEVSSLLGRAGTA 123



 Score = 24.3 bits (51), Expect(2) = 3e-09
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
 Frame = +1

Query: 1   DNAPSGTFAQPSDLIDQGSHGVQMKKDGVLVPPQV----------GETMEKHVQESFTFA 150
           DNAP G+F   +  +  GS G+  +  G  +PP++          G    K ++E  +  
Sbjct: 12  DNAPGGSFPLANGHLSHGS-GIVYQSRG--LPPELTRNLTASPIGGGMDNKQLREPLSAP 68

Query: 151 EMNTSVYG 174
           EM    YG
Sbjct: 69  EMERVSYG 76


>gb|AAD39604.1|AC007454_3 F23M19.3 [Arabidopsis thaliana]
          Length = 609

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = +3

Query: 288 NIEDGIPRLPRALSNKSRSMKSRPAAVVKVSEMSVLLGKAGT 413
           NIEDGIPRL R LS KSRS KSR AAV KVSE+S LLG+AGT
Sbjct: 77  NIEDGIPRLSRVLSQKSRSTKSRQAAVAKVSEVSSLLGRAGT 118


>ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana]
           gi|37202044|gb|AAQ89637.1| At1g34320 [Arabidopsis
           thaliana] gi|51970944|dbj|BAD44164.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|51971088|dbj|BAD44236.1| hypothetical protein
           [Arabidopsis thaliana] gi|332193576|gb|AEE31697.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 657

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = +3

Query: 288 NIEDGIPRLPRALSNKSRSMKSRPAAVVKVSEMSVLLGKAGT 413
           NIEDGIPRL R LS KSRS KSR AAV KVSE+S LLG+AGT
Sbjct: 77  NIEDGIPRLSRVLSQKSRSTKSRQAAVAKVSEVSSLLGRAGT 118


>ref|XP_002891095.1| hypothetical protein ARALYDRAFT_473586 [Arabidopsis lyrata subsp.
           lyrata] gi|297336937|gb|EFH67354.1| hypothetical protein
           ARALYDRAFT_473586 [Arabidopsis lyrata subsp. lyrata]
          Length = 662

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = +3

Query: 288 NIEDGIPRLPRALSNKSRSMKSRPAAVVKVSEMSVLLGKAGT 413
           NIEDGIPRL R LS KSRS KSR AAV KVSE+S LLG+AGT
Sbjct: 82  NIEDGIPRLSRVLSQKSRSTKSRQAAVAKVSEVSSLLGRAGT 123


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