BLASTX nr result

ID: Coptis23_contig00006793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006793
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280162.1| PREDICTED: methionine gamma-lyase [Vitis vin...   670   0.0  
ref|XP_002518910.1| cystathionine gamma-synthase, putative [Rici...   668   0.0  
ref|XP_002299428.1| predicted protein [Populus trichocarpa] gi|2...   665   0.0  
gb|AGF70153.1| methionine gamma-lyase [Cucumis melo]                  652   0.0  
gb|ADN33936.1| cystathionine gamma-synthase [Cucumis melo subsp....   652   0.0  

>ref|XP_002280162.1| PREDICTED: methionine gamma-lyase [Vitis vinifera]
          Length = 438

 Score =  670 bits (1728), Expect = 0.0
 Identities = 333/392 (84%), Positives = 357/392 (91%)
 Frame = -1

Query: 1369 RHEFGEHGGVNMSIEASATFTVMEPETMRRMFSGELGPDRDFFVYSRHFNPTVLNLSRQM 1190
            RHEFGEHGGVNMSIEASATFTVMEP+TMRRMFSGELGPDRDFF+YSRHFNPTVLNLSRQM
Sbjct: 46   RHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFFIYSRHFNPTVLNLSRQM 105

Query: 1189 AALEGTEAAYCTSSGMSAISAALMQLCSSGDHVVASRTLYGGTHALLTHFLPRVSNITTT 1010
            AALEGTEAAYCTSSGMSAISAAL+QLCSSGDH+VASRTLYGGTHALLTHF PR  NITT+
Sbjct: 106  AALEGTEAAYCTSSGMSAISAALLQLCSSGDHIVASRTLYGGTHALLTHFFPRTCNITTS 165

Query: 1009 FVDIGDHLMVNDAIQVGKTKVLYLESVSNPTLMVANVPELCRIAHDKGVKVIVDNTFVPM 830
            FVDI D  MV+ AI  G+TKVLY E+++NP L VANVPELCR+AHDKG+ V+VDNTF PM
Sbjct: 166  FVDIKDLDMVDGAIIEGRTKVLYFEAIANPVLSVANVPELCRVAHDKGLTVVVDNTFAPM 225

Query: 829  VLSPARLGADVVVHSISKYISGGADIIAGAVCGRASLVNSMMDLHQGALMLLGPTMNPKV 650
            V+SPA+LGADVVVHSISK+ISGGADIIAGAVCG A LVNSMMDLHQGALMLLGPTMNPKV
Sbjct: 226  VMSPAKLGADVVVHSISKFISGGADIIAGAVCGPAKLVNSMMDLHQGALMLLGPTMNPKV 285

Query: 649  AFELSERIPHLSLRMKEHCHRALVYATRMKKLGLKVIYPGLEEHPQHTLLKSLANKDYGF 470
            AFELSERIPHL LRMKEHC RAL YATRMKKLGLKVIYPGLE HP HT+LKS+AN DYGF
Sbjct: 286  AFELSERIPHLGLRMKEHCRRALEYATRMKKLGLKVIYPGLEGHPDHTVLKSIANLDYGF 345

Query: 469  GGILCVDMETEDRANRLMHHLQNYTQFGFMAVSLGYYETLMXXXXXXXXSEMNVEEKELA 290
            GG+LC+DM TE++ANRLM+ LQN TQFGFMAVSLGYYETLM        SEMN EEK LA
Sbjct: 346  GGLLCLDMGTEEKANRLMNLLQNSTQFGFMAVSLGYYETLMSCSGSSTSSEMNAEEKALA 405

Query: 289  GISPGLVRMSIGYSGTLEQRWSQFEKALSRMQ 194
            GISPGLVRMS+GYSGTLEQRWSQFEKALSRMQ
Sbjct: 406  GISPGLVRMSVGYSGTLEQRWSQFEKALSRMQ 437


>ref|XP_002518910.1| cystathionine gamma-synthase, putative [Ricinus communis]
            gi|223541897|gb|EEF43443.1| cystathionine gamma-synthase,
            putative [Ricinus communis]
          Length = 449

 Score =  668 bits (1724), Expect = 0.0
 Identities = 326/393 (82%), Positives = 359/393 (91%)
 Frame = -1

Query: 1369 RHEFGEHGGVNMSIEASATFTVMEPETMRRMFSGELGPDRDFFVYSRHFNPTVLNLSRQM 1190
            RHEFGEHGGVNMSIEASATFTVMEP+TMRRMFSGELGPDRDFF+YSRHFNPTVLNL RQM
Sbjct: 55   RHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFFIYSRHFNPTVLNLGRQM 114

Query: 1189 AALEGTEAAYCTSSGMSAISAALMQLCSSGDHVVASRTLYGGTHALLTHFLPRVSNITTT 1010
            AALEGTEAAYCT+SGMSAIS+  +QLCSSG HVVASRTLYGGTHALL+HFLPR  NITTT
Sbjct: 115  AALEGTEAAYCTASGMSAISSVFLQLCSSGGHVVASRTLYGGTHALLSHFLPRACNITTT 174

Query: 1009 FVDIGDHLMVNDAIQVGKTKVLYLESVSNPTLMVANVPELCRIAHDKGVKVIVDNTFVPM 830
            FV+IGD  MV +AI  GKTKV Y ES++NPTL VAN+PEL RIAHDKGV V+VDNTF PM
Sbjct: 175  FVEIGDIEMVKNAIVEGKTKVFYFESIANPTLTVANIPELSRIAHDKGVTVVVDNTFAPM 234

Query: 829  VLSPARLGADVVVHSISKYISGGADIIAGAVCGRASLVNSMMDLHQGALMLLGPTMNPKV 650
            V+SPARLGADVVVHSI+K+ISGGADIIAGAVCG ASLVNSMMDLHQGA+MLLGPTMN KV
Sbjct: 235  VISPARLGADVVVHSITKFISGGADIIAGAVCGPASLVNSMMDLHQGAIMLLGPTMNAKV 294

Query: 649  AFELSERIPHLSLRMKEHCHRALVYATRMKKLGLKVIYPGLEEHPQHTLLKSLANKDYGF 470
            AF+LS RIPHL LRMKEHCHRA+VYATRMKKLGLKVIYPGLE+HP H LLKS+ANKDYGF
Sbjct: 295  AFDLSGRIPHLGLRMKEHCHRAMVYATRMKKLGLKVIYPGLEDHPHHQLLKSMANKDYGF 354

Query: 469  GGILCVDMETEDRANRLMHHLQNYTQFGFMAVSLGYYETLMXXXXXXXXSEMNVEEKELA 290
            G +LC+DMETE++ANRL++HLQNYTQFGFMAVSLGYYETLM        SE+N EEK+LA
Sbjct: 355  GALLCLDMETEEKANRLLNHLQNYTQFGFMAVSLGYYETLMSVSGSSTSSELNAEEKKLA 414

Query: 289  GISPGLVRMSIGYSGTLEQRWSQFEKALSRMQD 191
            GISPGL+RMS+GY GTLEQ+WSQFEKALSRM++
Sbjct: 415  GISPGLIRMSVGYLGTLEQKWSQFEKALSRMKE 447


>ref|XP_002299428.1| predicted protein [Populus trichocarpa] gi|222846686|gb|EEE84233.1|
            predicted protein [Populus trichocarpa]
          Length = 454

 Score =  665 bits (1717), Expect = 0.0
 Identities = 326/397 (82%), Positives = 360/397 (90%)
 Frame = -1

Query: 1369 RHEFGEHGGVNMSIEASATFTVMEPETMRRMFSGELGPDRDFFVYSRHFNPTVLNLSRQM 1190
            RHEFGEHGGVNMSIEASATFTVMEPETMRRMF+GELGPDRDFF+YSRHFNPTVLNL RQM
Sbjct: 56   RHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLGRQM 115

Query: 1189 AALEGTEAAYCTSSGMSAISAALMQLCSSGDHVVASRTLYGGTHALLTHFLPRVSNITTT 1010
            AALEGTEAAYCT+SGMSAIS+ L+QLCSSG H+VASRTLYGGTHALLTHFLPR  NITTT
Sbjct: 116  AALEGTEAAYCTASGMSAISSVLLQLCSSGGHMVASRTLYGGTHALLTHFLPRACNITTT 175

Query: 1009 FVDIGDHLMVNDAIQVGKTKVLYLESVSNPTLMVANVPELCRIAHDKGVKVIVDNTFVPM 830
            FVDI DH MV +A+  G+TKVLY ES+SNPTL VAN+PEL RIAHDKG  V+VDNTF PM
Sbjct: 176  FVDINDHEMVKNAMVEGQTKVLYFESISNPTLTVANIPELSRIAHDKGATVVVDNTFSPM 235

Query: 829  VLSPARLGADVVVHSISKYISGGADIIAGAVCGRASLVNSMMDLHQGALMLLGPTMNPKV 650
            VLSPARLGADVVVHSISK+ISGGADIIAGAVCG A+LVNSMMDL  GALMLLGPTMN KV
Sbjct: 236  VLSPARLGADVVVHSISKFISGGADIIAGAVCGPANLVNSMMDLQHGALMLLGPTMNAKV 295

Query: 649  AFELSERIPHLSLRMKEHCHRALVYATRMKKLGLKVIYPGLEEHPQHTLLKSLANKDYGF 470
            AFELSERIPHL LRMKEHCHRA+VYAT++KKLGL VIYPGLE+HPQH LLKS+ANK+YGF
Sbjct: 296  AFELSERIPHLGLRMKEHCHRAMVYATKIKKLGLNVIYPGLEDHPQHELLKSMANKEYGF 355

Query: 469  GGILCVDMETEDRANRLMHHLQNYTQFGFMAVSLGYYETLMXXXXXXXXSEMNVEEKELA 290
            GG+LC+DMETE++ANRLM+HLQN TQFGFMAVSLGYYETLM        SE+N EE+ LA
Sbjct: 356  GGLLCIDMETEEKANRLMNHLQNCTQFGFMAVSLGYYETLMSCSGSSTSSELNDEEQALA 415

Query: 289  GISPGLVRMSIGYSGTLEQRWSQFEKALSRMQDTGLF 179
            GISPGLVR+S+G+ GTL Q+WSQFEKA SR+QD+GL+
Sbjct: 416  GISPGLVRISVGFVGTLAQKWSQFEKAFSRLQDSGLY 452


>gb|AGF70153.1| methionine gamma-lyase [Cucumis melo]
          Length = 449

 Score =  652 bits (1681), Expect = 0.0
 Identities = 326/396 (82%), Positives = 352/396 (88%)
 Frame = -1

Query: 1369 RHEFGEHGGVNMSIEASATFTVMEPETMRRMFSGELGPDRDFFVYSRHFNPTVLNLSRQM 1190
            RHEFGEHGGVNMSIEASATFTVMEPETMRRMF+GELGPDRDFF+YSRHFNPTVLNLSRQM
Sbjct: 49   RHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQM 108

Query: 1189 AALEGTEAAYCTSSGMSAISAALMQLCSSGDHVVASRTLYGGTHALLTHFLPRVSNITTT 1010
            AALEGT AAYCTSSGMSAI+A L+QL +SGDHVVASRTLYGGTHAL+ HF PR SNITTT
Sbjct: 109  AALEGTAAAYCTSSGMSAIAAVLLQLLASGDHVVASRTLYGGTHALMAHFFPRTSNITTT 168

Query: 1009 FVDIGDHLMVNDAIQVGKTKVLYLESVSNPTLMVANVPELCRIAHDKGVKVIVDNTFVPM 830
            FVDIGD   V  AI  GKTKVLY ESVSNPTL VAN+PELCRI H+KGV V+VDNTF PM
Sbjct: 169  FVDIGDLKEVEKAIVEGKTKVLYFESVSNPTLAVANIPELCRIGHEKGVTVVVDNTFAPM 228

Query: 829  VLSPARLGADVVVHSISKYISGGADIIAGAVCGRASLVNSMMDLHQGALMLLGPTMNPKV 650
            +LSPARLGADVVVHSISK+ISGGADIIAGAVCG   LVNSMMDL QG+LMLLGPTMN KV
Sbjct: 229  ILSPARLGADVVVHSISKFISGGADIIAGAVCGPTKLVNSMMDLRQGSLMLLGPTMNAKV 288

Query: 649  AFELSERIPHLSLRMKEHCHRALVYATRMKKLGLKVIYPGLEEHPQHTLLKSLANKDYGF 470
            AFELSERIPHLSLRMKEHC RA V+A RMKK GLKVIYPGLE+HPQH L+KSLAN +YGF
Sbjct: 289  AFELSERIPHLSLRMKEHCRRASVFAERMKKAGLKVIYPGLEDHPQHQLMKSLANPEYGF 348

Query: 469  GGILCVDMETEDRANRLMHHLQNYTQFGFMAVSLGYYETLMXXXXXXXXSEMNVEEKELA 290
            GG+LCVDM TE+RAN+LM  LQN TQFGFMAVSLGYYETLM        SEM+ EE+ELA
Sbjct: 349  GGMLCVDMGTEERANKLMSILQNTTQFGFMAVSLGYYETLMSCSGSSTSSEMSGEERELA 408

Query: 289  GISPGLVRMSIGYSGTLEQRWSQFEKALSRMQDTGL 182
            GISPGLVRMSIGY GTLEQ+WSQFEKAL+++QD G+
Sbjct: 409  GISPGLVRMSIGYMGTLEQKWSQFEKALAKVQDIGV 444


>gb|ADN33936.1| cystathionine gamma-synthase [Cucumis melo subsp. melo]
          Length = 417

 Score =  652 bits (1681), Expect = 0.0
 Identities = 326/396 (82%), Positives = 352/396 (88%)
 Frame = -1

Query: 1369 RHEFGEHGGVNMSIEASATFTVMEPETMRRMFSGELGPDRDFFVYSRHFNPTVLNLSRQM 1190
            RHEFGEHGGVNMSIEASATFTVMEPETMRRMF+GELGPDRDFF+YSRHFNPTVLNLSRQM
Sbjct: 17   RHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRQM 76

Query: 1189 AALEGTEAAYCTSSGMSAISAALMQLCSSGDHVVASRTLYGGTHALLTHFLPRVSNITTT 1010
            AALEGT AAYCTSSGMSAI+A L+QL +SGDHVVASRTLYGGTHAL+ HF PR SNITTT
Sbjct: 77   AALEGTAAAYCTSSGMSAIAAVLLQLLASGDHVVASRTLYGGTHALMAHFFPRTSNITTT 136

Query: 1009 FVDIGDHLMVNDAIQVGKTKVLYLESVSNPTLMVANVPELCRIAHDKGVKVIVDNTFVPM 830
            FVDIGD   V  AI  GKTKVLY ESVSNPTL VAN+PELCRI H+KGV V+VDNTF PM
Sbjct: 137  FVDIGDLKEVEKAIVEGKTKVLYFESVSNPTLAVANIPELCRIGHEKGVTVVVDNTFAPM 196

Query: 829  VLSPARLGADVVVHSISKYISGGADIIAGAVCGRASLVNSMMDLHQGALMLLGPTMNPKV 650
            +LSPARLGADVVVHSISK+ISGGADIIAGAVCG   LVNSMMDL QG+LMLLGPTMN KV
Sbjct: 197  ILSPARLGADVVVHSISKFISGGADIIAGAVCGPTKLVNSMMDLRQGSLMLLGPTMNAKV 256

Query: 649  AFELSERIPHLSLRMKEHCHRALVYATRMKKLGLKVIYPGLEEHPQHTLLKSLANKDYGF 470
            AFELSERIPHLSLRMKEHC RA V+A RMKK GLKVIYPGLE+HPQH L+KSLAN +YGF
Sbjct: 257  AFELSERIPHLSLRMKEHCRRASVFAERMKKAGLKVIYPGLEDHPQHQLMKSLANPEYGF 316

Query: 469  GGILCVDMETEDRANRLMHHLQNYTQFGFMAVSLGYYETLMXXXXXXXXSEMNVEEKELA 290
            GG+LCVDM TE+RAN+LM  LQN TQFGFMAVSLGYYETLM        SEM+ EE+ELA
Sbjct: 317  GGMLCVDMGTEERANKLMSILQNTTQFGFMAVSLGYYETLMSCSGSSTSSEMSGEERELA 376

Query: 289  GISPGLVRMSIGYSGTLEQRWSQFEKALSRMQDTGL 182
            GISPGLVRMSIGY GTLEQ+WSQFEKAL+++QD G+
Sbjct: 377  GISPGLVRMSIGYMGTLEQKWSQFEKALAKVQDIGV 412


Top