BLASTX nr result

ID: Coptis23_contig00006785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006785
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510065.1| conserved hypothetical protein [Ricinus comm...   139   3e-31
ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_004141410.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10...   130   8e-29
ref|XP_002302396.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002285423.2| PREDICTED: uncharacterized protein LOC100250...   125   3e-27

>ref|XP_002510065.1| conserved hypothetical protein [Ricinus communis]
           gi|223550766|gb|EEF52252.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/94 (71%), Positives = 80/94 (85%)
 Frame = -2

Query: 282 SKRRKKWILLLAAFGITGYSVYKVYNLPCVVKKRKKLMKLIGTVISLIEVVSDSTETIGI 103
           S RR++WILLLAA G++GY  YKVYNLP +VKKRK+ MKL G +IS+ E+VSDS +TIGI
Sbjct: 13  SPRRRRWILLLAALGVSGYGAYKVYNLPSIVKKRKRYMKLFGALISVAELVSDSADTIGI 72

Query: 102 VSNDLNQFLKSDSDEIPNSLKQISKIARSEEFSE 1
           VS DL QFL SDSD+IPNS KQISKIA+S+EFSE
Sbjct: 73  VSRDLKQFLLSDSDQIPNSFKQISKIAKSDEFSE 106


>ref|XP_002320678.1| predicted protein [Populus trichocarpa] gi|222861451|gb|EEE98993.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/106 (62%), Positives = 88/106 (83%), Gaps = 4/106 (3%)
 Frame = -2

Query: 306 MDLEFI----NYSKRRKKWILLLAAFGITGYSVYKVYNLPCVVKKRKKLMKLIGTVISLI 139
           MDLE +    ++S+R+KK ++LLA FG++GY  Y++YNLP V +KR+  MKL+G +IS+ 
Sbjct: 1   MDLELVKSGVHFSRRKKKLLILLAVFGVSGYGFYRLYNLPAVARKRRGFMKLMGALISIA 60

Query: 138 EVVSDSTETIGIVSNDLNQFLKSDSDEIPNSLKQISKIARSEEFSE 1
           E+VSDSTETI IVS DL +FL+SDSD+IPNSLKQISKIA+S+EFSE
Sbjct: 61  EMVSDSTETISIVSKDLKEFLQSDSDKIPNSLKQISKIAKSDEFSE 106


>ref|XP_004141410.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A10-like [Cucumis sativus]
           gi|449517421|ref|XP_004165744.1| PREDICTED: protein
           PHLOEM PROTEIN 2-LIKE A10-like [Cucumis sativus]
          Length = 422

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/106 (59%), Positives = 84/106 (79%), Gaps = 4/106 (3%)
 Frame = -2

Query: 306 MDLEFIN----YSKRRKKWILLLAAFGITGYSVYKVYNLPCVVKKRKKLMKLIGTVISLI 139
           MD E +     +S+R KKW++LLA  G++GY  YKVY+LP V  KRK+LM+L G +IS+ 
Sbjct: 1   MDFELVRRGLGFSQRNKKWLVLLALTGVSGYGAYKVYHLPSVETKRKRLMRLFGAMISVA 60

Query: 138 EVVSDSTETIGIVSNDLNQFLKSDSDEIPNSLKQISKIARSEEFSE 1
           ++V+DS+E IG++S DL +FLKSDSD+IPNSLKQISKIA+S EFSE
Sbjct: 61  DMVADSSEAIGVISKDLKEFLKSDSDQIPNSLKQISKIAKSGEFSE 106


>ref|XP_002302396.1| predicted protein [Populus trichocarpa] gi|222844122|gb|EEE81669.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/93 (64%), Positives = 80/93 (86%)
 Frame = -2

Query: 279 KRRKKWILLLAAFGITGYSVYKVYNLPCVVKKRKKLMKLIGTVISLIEVVSDSTETIGIV 100
           +R+KK ++ LA  G++GY VYKVYNLP VV+KR++ M+L+G +IS+ E+VSDS ETI IV
Sbjct: 1   RRKKKLLIFLAVSGVSGYGVYKVYNLPAVVRKRRRFMRLMGALISIAEMVSDSAETISIV 60

Query: 99  SNDLNQFLKSDSDEIPNSLKQISKIARSEEFSE 1
           S DL +FL+SD+D+IPNSLKQISKIA+S+EFSE
Sbjct: 61  SKDLKEFLQSDADKIPNSLKQISKIAKSDEFSE 93


>ref|XP_002285423.2| PREDICTED: uncharacterized protein LOC100250545 [Vitis vinifera]
          Length = 842

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/105 (57%), Positives = 84/105 (80%), Gaps = 4/105 (3%)
 Frame = -2

Query: 306 MDLEFI----NYSKRRKKWILLLAAFGITGYSVYKVYNLPCVVKKRKKLMKLIGTVISLI 139
           MDLE +    + ++RRKK ++LLA FG++ +  YKVY+ P VV+KR++L KL+G +IS+ 
Sbjct: 425 MDLELVKKALDLARRRKKLVVLLAVFGVSSFGAYKVYHWPYVVRKRQRLFKLLGALISIA 484

Query: 138 EVVSDSTETIGIVSNDLNQFLKSDSDEIPNSLKQISKIARSEEFS 4
           E+ SDS ET+G+VS DL +FL+SD+D+IPNSLKQISKI +SEEFS
Sbjct: 485 EMASDSAETVGVVSKDLKEFLQSDTDQIPNSLKQISKIVKSEEFS 529


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