BLASTX nr result

ID: Coptis23_contig00006775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006775
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280200.1| PREDICTED: uncharacterized protein LOC100263...   294   2e-77
emb|CAN80846.1| hypothetical protein VITISV_014889 [Vitis vinifera]   294   2e-77
ref|XP_002519554.1| protein binding protein, putative [Ricinus c...   283   3e-74
ref|XP_003554369.1| PREDICTED: uncharacterized protein LOC100803...   276   4e-72
dbj|BAA74802.1| DNA binding zinc finger protein (Pspzf) [Pisum s...   266   4e-69

>ref|XP_002280200.1| PREDICTED: uncharacterized protein LOC100263731 [Vitis vinifera]
            gi|297741578|emb|CBI32710.3| unnamed protein product
            [Vitis vinifera]
          Length = 546

 Score =  294 bits (752), Expect = 2e-77
 Identities = 158/282 (56%), Positives = 196/282 (69%), Gaps = 9/282 (3%)
 Frame = -3

Query: 918  REWNSTTVSPTARGRILSSDRSGSSQWTDQLAVGS----APVQLGGHHHDLVATGSSVPH 751
            REWN   +SP A GR   SD SG S  T+   +GS    APV+ GG++HD + + + +  
Sbjct: 265  REWNHI-LSP-AHGRTPVSDTSGLSHETNHFPLGSCTTNAPVEFGGYNHDFIPSRNPIVP 322

Query: 750  QNLHGPAAHAVRGSRSGYVQRPVPAYRAISNFARGGGYRTSHANGLHLEPYPSRHS---- 583
            Q+LHG +  +VRG R+ Y QR  P  RA S+ +R G   T     L  E Y SRHS    
Sbjct: 323  QSLHGTSNQSVRGVRTSYSQRSTPTSRASSSNSRLGHPTTDEGLQLVAENYSSRHSRPFS 382

Query: 582  TLGWRGNDRIGRSRILYERSRSLSDDVDAHDRMVSEGLMMVDHSALYGARNLLDRHRDMR 403
            T+GWR +DR GRSRI  ER RSLSD+    +R+ SEGLM+VD SALYG+RNL D+HR+MR
Sbjct: 383  TVGWRNSDRNGRSRISNERFRSLSDEAGVRERLASEGLMIVDRSALYGSRNLFDQHREMR 442

Query: 402  LDVDNMSYEELVALGERIGNVSTGLSQSSIAKCLVETHYLSNGK-QEEGNCVICLEDYKN 226
            LDVDNMSYEEL+ALGERIGNV+TGLS+  ++KCL ET Y S+ + QEEG CVICL++YKN
Sbjct: 443  LDVDNMSYEELLALGERIGNVNTGLSEDMMSKCLTETIYCSSDQLQEEGACVICLDEYKN 502

Query: 225  REEVGKLLNCGHDFHVGCIKKWLPMKNSCPICKGVALADDLK 100
             ++VG L  C HD+HV CIKKWL MKNSCPICK  AL D +K
Sbjct: 503  MDDVGTLSACRHDYHVDCIKKWLLMKNSCPICKAPALPDHMK 544


>emb|CAN80846.1| hypothetical protein VITISV_014889 [Vitis vinifera]
          Length = 532

 Score =  294 bits (752), Expect = 2e-77
 Identities = 158/282 (56%), Positives = 196/282 (69%), Gaps = 9/282 (3%)
 Frame = -3

Query: 918  REWNSTTVSPTARGRILSSDRSGSSQWTDQLAVGS----APVQLGGHHHDLVATGSSVPH 751
            REWN   +SP A GR   SD SG S  T+   +GS    APV+ GG++HD + + + +  
Sbjct: 251  REWNHI-LSP-AHGRTPVSDTSGLSHETNHFPLGSCTTNAPVEFGGYNHDFIPSRNPIVP 308

Query: 750  QNLHGPAAHAVRGSRSGYVQRPVPAYRAISNFARGGGYRTSHANGLHLEPYPSRHS---- 583
            Q+LHG +  +VRG R+ Y QR  P  RA S+ +R G   T     L  E Y SRHS    
Sbjct: 309  QSLHGTSNQSVRGVRTSYSQRSTPTSRASSSNSRLGHPTTDEGLQLVAENYSSRHSRPFS 368

Query: 582  TLGWRGNDRIGRSRILYERSRSLSDDVDAHDRMVSEGLMMVDHSALYGARNLLDRHRDMR 403
            T+GWR +DR GRSRI  ER RSLSD+    +R+ SEGLM+VD SALYG+RNL D+HR+MR
Sbjct: 369  TVGWRNSDRNGRSRISNERFRSLSDEAGVRERLASEGLMIVDRSALYGSRNLFDQHREMR 428

Query: 402  LDVDNMSYEELVALGERIGNVSTGLSQSSIAKCLVETHYLSNGK-QEEGNCVICLEDYKN 226
            LDVDNMSYEEL+ALGERIGNV+TGLS+  ++KCL ET Y S+ + QEEG CVICL++YKN
Sbjct: 429  LDVDNMSYEELLALGERIGNVNTGLSEDMMSKCLTETIYCSSDQLQEEGACVICLDEYKN 488

Query: 225  REEVGKLLNCGHDFHVGCIKKWLPMKNSCPICKGVALADDLK 100
             ++VG L  C HD+HV CIKKWL MKNSCPICK  AL D +K
Sbjct: 489  MDDVGTLSACRHDYHVDCIKKWLLMKNSCPICKAPALPDHMK 530


>ref|XP_002519554.1| protein binding protein, putative [Ricinus communis]
            gi|223541417|gb|EEF42968.1| protein binding protein,
            putative [Ricinus communis]
          Length = 547

 Score =  283 bits (725), Expect = 3e-74
 Identities = 151/283 (53%), Positives = 197/283 (69%), Gaps = 10/283 (3%)
 Frame = -3

Query: 915  EWNSTTVSPTARGRILSSDRSG-SSQWTDQLAVGS----APVQLGGHHHDLVATGSSVPH 751
            +W+   + P A GR+L SD SG +S  T+   VGS    A V + G+ HD +++ + V  
Sbjct: 267  DWSHARMPP-ASGRMLVSDASGYNSHDTNHFLVGSSITNAAVDIRGYPHDFISSRNPVVP 325

Query: 750  QNLHGPAAHAVRGSRSGYVQRPVPAYRAISNFARGGGYRTSHANGLHLEPYPSRH----S 583
            Q+ H  +A+++RG RS   QRP PA+RA S+  R G    S+ +G+ L    SR     S
Sbjct: 326  QSFHSSSANSIRGIRSSSSQRPSPAFRASSSTLRLGHVAPSN-DGMQLVAETSRQPRLSS 384

Query: 582  TLGWRGNDRIGRSRILYERSRSLSDDVDAHDRMVSEGLMMVDHSALYGARNLLDRHRDMR 403
            T+ WR +DR GRSR+ Y+R RS+S++   HDR  SEG M+VD S  YG RN++D+HRDMR
Sbjct: 385  TIAWRNSDRNGRSRVSYDRYRSVSNEPGLHDRFASEGYMVVDRSTSYGPRNMVDQHRDMR 444

Query: 402  LDVDNMSYEELVALGERIGNVSTGLSQSSIAKCLVETHYLSNG-KQEEGNCVICLEDYKN 226
            LDVDNMSYEEL+ALGERIG VSTGLS+  I+KCL ET Y S+G  Q+EGNCVICLE+YK+
Sbjct: 445  LDVDNMSYEELLALGERIGCVSTGLSEDLISKCLTETVYCSSGLSQDEGNCVICLEEYKD 504

Query: 225  REEVGKLLNCGHDFHVGCIKKWLPMKNSCPICKGVALADDLKE 97
             ++VG L  CGHD+HV CIKKWL MKN CPICK  A+AD++KE
Sbjct: 505  MDDVGSLKACGHDYHVSCIKKWLSMKNLCPICKASAMADNMKE 547


>ref|XP_003554369.1| PREDICTED: uncharacterized protein LOC100803627 [Glycine max]
          Length = 549

 Score =  276 bits (707), Expect = 4e-72
 Identities = 147/288 (51%), Positives = 188/288 (65%), Gaps = 13/288 (4%)
 Frame = -3

Query: 918  REWNSTTVSPTARGRILSSDRSGSSQWTDQLAVGS------APVQLGGHHHDLVATGSSV 757
            R+W+   +SP A GR+L SD S     T    VGS      A V +GG HH+  A+ +  
Sbjct: 266  RDWSQMNMSP-ANGRVLLSDTSSFGLETSHFLVGSGATASNASVDVGGFHHEFGASRNPT 324

Query: 756  PHQNLHGPAAHAVRGSRSGYVQRPVPAYRAISNFARGGGYRTSHANGLHL--EPYPSRH- 586
              Q+ H       RG RS Y QR  P +RA S+   G     +  +GL +  E Y SRH 
Sbjct: 325  APQSFHNTHTQTARGIRSNYSQRSTPTFRASSSLRLG---HVTSDDGLPMVAESYSSRHP 381

Query: 585  ---STLGWRGNDRIGRSRILYERSRSLSDDVDAHDRMVSEGLMMVDHSALYGARNLLDRH 415
               ST+GWR  DR GRSRI  ER RSL+++   HDR  SEG M+V+ +++YG+RN+LD+H
Sbjct: 382  RPLSTIGWRNGDRNGRSRISSERYRSLTEESGLHDRFSSEGFMVVERASVYGSRNMLDQH 441

Query: 414  RDMRLDVDNMSYEELVALGERIGNVSTGLSQSSIAKCLVETHYLSNGKQE-EGNCVICLE 238
            RDMR+DVDNMSYEEL+ALGERIG V+TG+S+  ++KCL ET Y S+ + E EGNCVICLE
Sbjct: 442  RDMRMDVDNMSYEELLALGERIGYVNTGVSEDLLSKCLTETIYCSSEQSEDEGNCVICLE 501

Query: 237  DYKNREEVGKLLNCGHDFHVGCIKKWLPMKNSCPICKGVALADDLKEK 94
            +YKN ++VG L  CGHD+HV CIKKWL MK  CPICK  AL +D K+K
Sbjct: 502  EYKNMDDVGTLQTCGHDYHVSCIKKWLSMKKLCPICKVSALPEDTKDK 549


>dbj|BAA74802.1| DNA binding zinc finger protein (Pspzf) [Pisum sativum]
          Length = 472

 Score =  266 bits (681), Expect = 4e-69
 Identities = 152/298 (51%), Positives = 191/298 (64%), Gaps = 23/298 (7%)
 Frame = -3

Query: 918  REWNSTTVSPTARGRILSSDRSGSSQWTDQLAVGSA-------PVQLGGHHHDLVATGSS 760
            R+W+   V+P A GR+L  D S S   T    VG+A       P  +G  HH+   + + 
Sbjct: 186  RDWSQMNVTP-ANGRVLLPDASTSGLETSHFPVGNAATASSNAPADVGSFHHEFGTSRNP 244

Query: 759  VP---HQNLHGPAAHAVRGSRSGYVQRPVPAYRAISNFARGGGYRTSHA----NGLHL-- 607
                  QNL  PA    RG+RS Y QR  PA+RA SN       R SHA    NGL +  
Sbjct: 245  TTAQSFQNLTQPA----RGTRSNYSQRSTPAFRASSNL------RMSHAVPSDNGLPMVA 294

Query: 606  EPYPSRH----STLGWRGNDRIGRSRILYERSRSLSDDVDAHDRMVSE--GLMMVDHSAL 445
            E Y SRH    +T+GWR  DR GRSRI  ER RSL+D+   H R  SE  G M+V+ ++L
Sbjct: 295  EGYSSRHPRPLTTVGWRNGDRNGRSRISSERYRSLADEAGLHARFSSEVPGFMIVERASL 354

Query: 444  YGARNLLDRHRDMRLDVDNMSYEELVALGERIGNVSTGLSQSSIAKCLVETHYLSNGK-Q 268
            YG+RN+LD+HRDMR+DVDNMSYEEL+ALGERIG V+TGLS+  ++KCL ET Y S+ + Q
Sbjct: 355  YGSRNILDQHRDMRMDVDNMSYEELLALGERIGQVNTGLSEDVLSKCLTETIYCSSDQCQ 414

Query: 267  EEGNCVICLEDYKNREEVGKLLNCGHDFHVGCIKKWLPMKNSCPICKGVALADDLKEK 94
            +EG+CVICLE+YKN ++VG L  CGHD+HV CIKKWL MK  CPICK   L +D K+K
Sbjct: 415  DEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSVLPEDKKDK 472


Top