BLASTX nr result

ID: Coptis23_contig00006772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006772
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263956.1| PREDICTED: uncharacterized transporter sll03...   127   7e-28
ref|XP_003537380.1| PREDICTED: uncharacterized transporter sll03...   126   2e-27
ref|XP_002882247.1| integral membrane family protein [Arabidopsi...   125   5e-27
tpg|DAA49494.1| TPA: hypothetical protein ZEAMMB73_244573 [Zea m...   124   8e-27
ref|NP_566180.1| nodulin MtN21 /EamA-like transporter protein [A...   124   8e-27

>ref|XP_002263956.1| PREDICTED: uncharacterized transporter sll0355 [Vitis vinifera]
          Length = 382

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/100 (66%), Positives = 76/100 (76%), Gaps = 9/100 (9%)
 Frame = +3

Query: 36  LLDWALLISPFFFWGTAMVAMKDVLPRAGPFFVSSFRLLPAGLLLVAFALSTGRKLPTAP 215
           L +W +L+SPFFFWGTAMVAMK VLP+AGPFFVSSFRL+PAGLL++A+A S GRK P+  
Sbjct: 87  LWEWGVLVSPFFFWGTAMVAMKQVLPKAGPFFVSSFRLIPAGLLIIAYAASRGRKQPSGF 146

Query: 216 MAWL-----ALVDATCFQGFLA----LTSAGLGSSVAHPQ 308
            AWL     ALVDA CFQGFLA     TSAGLGS +   Q
Sbjct: 147 SAWLSIFLFALVDAACFQGFLAEGLQRTSAGLGSVIIDSQ 186


>ref|XP_003537380.1| PREDICTED: uncharacterized transporter sll0355-like [Glycine max]
          Length = 412

 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/100 (67%), Positives = 77/100 (77%), Gaps = 9/100 (9%)
 Frame = +3

Query: 36  LLDWALLISPFFFWGTAMVAMKDVLPRAGPFFVSSFRLLPAGLLLVAFALSTGRKLPTAP 215
           L + A+L+SPFFFWGTAMVAMK+VLP+ GPFFVS+FRL+PAG LLVAFA S GR LP+  
Sbjct: 117 LWEGAVLVSPFFFWGTAMVAMKEVLPKCGPFFVSAFRLIPAGFLLVAFAASRGRSLPSGF 176

Query: 216 MAWL-----ALVDATCFQGFLA----LTSAGLGSSVAHPQ 308
           +AWL     ALVDATCFQGFLA     TSAGLGS +   Q
Sbjct: 177 IAWLSITLFALVDATCFQGFLAEGLQRTSAGLGSIIIDSQ 216


>ref|XP_002882247.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328087|gb|EFH58506.1| integral membrane family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 424

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/100 (67%), Positives = 75/100 (75%), Gaps = 9/100 (9%)
 Frame = +3

Query: 36  LLDWALLISPFFFWGTAMVAMKDVLPRAGPFFVSSFRLLPAGLLLVAFALSTGRKLPTAP 215
           LL+W +LISPFFFWGTAMVAMK+VLP  GPFFV++FRL+PAGLLLVAFA+   R LP   
Sbjct: 129 LLEWTVLISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKARPLPKGI 188

Query: 216 MAWL-----ALVDATCFQGFLA----LTSAGLGSSVAHPQ 308
            AWL     ALVDATCFQGFLA     TSAGLGS +   Q
Sbjct: 189 NAWLSIALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQ 228


>tpg|DAA49494.1| TPA: hypothetical protein ZEAMMB73_244573 [Zea mays]
          Length = 416

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/123 (55%), Positives = 80/123 (65%), Gaps = 9/123 (7%)
 Frame = +3

Query: 36  LLDWALLISPFFFWGTAMVAMKDVLPRAGPFFVSSFRLLPAGLLLVAFALSTGRKLPTAP 215
           LL+WA L+SPFFFWGTAMVAMK V+PR GPFFV++ RLLPAG LLVAFA + GRK P+  
Sbjct: 119 LLEWASLVSPFFFWGTAMVAMKGVIPRTGPFFVAAIRLLPAGALLVAFAAARGRKQPSGW 178

Query: 216 MAWLA-----LVDATCFQGFLA----LTSAGLGSSVAHPQSDDEQLLCECLVHRLLSTSK 368
            AWLA     L+DA CFQGFLA     TSAGLGS +   Q     +L   L    +    
Sbjct: 179 EAWLAIAAFGLIDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAILASLLFGESIGAIG 238

Query: 369 ISG 377
           + G
Sbjct: 239 VGG 241


>ref|NP_566180.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]
           gi|16226571|gb|AAL16203.1|AF428434_1 AT3g02690/F16B3_32
           [Arabidopsis thaliana] gi|15010664|gb|AAK73991.1|
           AT3g02690/F16B3_32 [Arabidopsis thaliana]
           gi|21593005|gb|AAM64954.1| unknown [Arabidopsis
           thaliana] gi|22137110|gb|AAM91400.1| At3g02690/F16B3_32
           [Arabidopsis thaliana] gi|332640327|gb|AEE73848.1|
           nodulin MtN21 /EamA-like transporter protein
           [Arabidopsis thaliana]
          Length = 417

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/99 (66%), Positives = 74/99 (74%), Gaps = 9/99 (9%)
 Frame = +3

Query: 39  LDWALLISPFFFWGTAMVAMKDVLPRAGPFFVSSFRLLPAGLLLVAFALSTGRKLPTAPM 218
           L+W +LISPFFFWGTAMVAMK+VLP  GPFFV++FRL+PAGLLLVAFA+  GR LP    
Sbjct: 123 LEWTVLISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGIN 182

Query: 219 AW-----LALVDATCFQGFLA----LTSAGLGSSVAHPQ 308
           AW      ALVDATCFQGFLA     TSAGLGS +   Q
Sbjct: 183 AWFSIALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQ 221


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