BLASTX nr result

ID: Coptis23_contig00006764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006764
         (1579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78662.1| hypothetical protein VITISV_041960 [Vitis vinifera]   114   9e-23
ref|XP_002313215.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-22
ref|XP_003608370.1| DUF593-containing protein [Medicago truncatu...   112   4e-22
ref|XP_002518341.1| conserved hypothetical protein [Ricinus comm...   108   4e-21
gb|ABW70156.1| DUF593-1 protein [Lotus japonicus]                     107   1e-20

>emb|CAN78662.1| hypothetical protein VITISV_041960 [Vitis vinifera]
          Length = 288

 Score =  114 bits (284), Expect = 9e-23
 Identities = 80/238 (33%), Positives = 121/238 (50%), Gaps = 1/238 (0%)
 Frame = +1

Query: 523  NLAAFGNMLLLFFILVLGFKVLYLDCYYNGLVQFLDNFRGKADDFRHGFCSSIEVCGICY 702
            N++   N L LF  L LGFKVL     + GL+Q    F  K+   ++GF S   +  +C 
Sbjct: 33   NVSLVCNHLGLFLXLGLGFKVLPCVHRFKGLIQIFREFGAKSSVLKNGFYSRSGIDEVCG 92

Query: 703  SKISSCKVGILNLLDNSVPD-LKNPVRNKEISIVVEETSILNXXXXXXXXXXXXXXXXXX 879
            + + S K G L LL NS P  + N V +K   ++V++ S                     
Sbjct: 93   TNVLSXKWGALKLLMNSNPPRIDNFVESK---VLVKDVS-------EEXDDDGGGEEKEC 142

Query: 880  XXXXXXRDLQALRKAVRIQRERVRKACLELEKERLXXXXXXNETMAMIMRLQSEVSSIQM 1059
                   D+  LRK ++++R R   A LELEKER+       E MA I+ L++E +SI++
Sbjct: 143  YVEDDEIDVIELRKLIKLERNRANAAVLELEKERVAAASAVEELMAKILCLKNEKNSIEI 202

Query: 1060 QANQYQRMAEQKQLHDQEVIHSLRWIVLKQESERSILESQLNLCNQERMMDWKAGDED 1233
            Q+NQ +R+AE KQ +D EVI  L+WI++  E +      +L+   ++  MD   GD D
Sbjct: 203  QSNQNRRLAELKQQYDDEVIRYLKWIIMNLEDQLEFCGEKLDSHGKDNEMDQYGGDAD 260


>ref|XP_002313215.1| predicted protein [Populus trichocarpa] gi|222849623|gb|EEE87170.1|
            predicted protein [Populus trichocarpa]
          Length = 253

 Score =  113 bits (283), Expect = 1e-22
 Identities = 77/223 (34%), Positives = 117/223 (52%)
 Frame = +1

Query: 574  GFKVLYLDCYYNGLVQFLDNFRGKADDFRHGFCSSIEVCGICYSKISSCKVGILNLLDNS 753
            G + L    +   LVQFL  F G++ D ++GFCS ++   +C +KI SC       L+NS
Sbjct: 18   GLRFLQFTWHGKSLVQFLCGFSGESSDPKNGFCSKLDFDKLCDTKIPSC-------LENS 70

Query: 754  VPDLKNPVRNKEISIVVEETSILNXXXXXXXXXXXXXXXXXXXXXXXXRDLQALRKAVRI 933
                    +N++ S+  +E  ++N                         D+ ALR+ V+I
Sbjct: 71   ------KAKNEDSSMTRKE--VVNDGVLDDDDCEREYSVEDEEY-----DVTALRRLVKI 117

Query: 934  QRERVRKACLELEKERLXXXXXXNETMAMIMRLQSEVSSIQMQANQYQRMAEQKQLHDQE 1113
            +R R   A  ELEKER+      +E MAMI+RLQ+E SS +++A QY+++AEQKQ   QE
Sbjct: 118  ERLRADMAYAELEKERMASASAADEAMAMILRLQNEKSSTEIEAKQYRQLAEQKQEFLQE 177

Query: 1114 VIHSLRWIVLKQESERSILESQLNLCNQERMMDWKAGDEDGLE 1242
            VI SL+W ++  E ERS +E  L L  ++     K+ + D  E
Sbjct: 178  VIESLQWDIINLEHERSEMEENLRLYREKLRQYVKSDEVDQFE 220


>ref|XP_003608370.1| DUF593-containing protein [Medicago truncatula]
            gi|165881783|gb|ABY71162.1| DUF593-containing protein 2
            [Medicago truncatula] gi|355509425|gb|AES90567.1|
            DUF593-containing protein [Medicago truncatula]
          Length = 454

 Score =  112 bits (279), Expect = 4e-22
 Identities = 82/251 (32%), Positives = 123/251 (49%)
 Frame = +1

Query: 448  MMDYGSSLNFSSKNTDFGGGIFMFRNLAAFGNMLLLFFILVLGFKVLYLDCYYNGLVQFL 627
            +M+    LNF    T FG    +   L+   N L +F +L   FK+L+   ++ G ++FL
Sbjct: 165  LMNLALPLNFL---TQFGCSFVLLSCLSRLLNFLGMFLMLGFCFKILHFGWHFKGALRFL 221

Query: 628  DNFRGKADDFRHGFCSSIEVCGICYSKISSCKVGILNLLDNSVPDLKNPVRNKEISIVVE 807
             +F G+    R   C    V  +   KI S + G  +   NS    ++ V  + ++  +E
Sbjct: 222  CDF-GRMPTIR--LCLENIVLEVSKKKIPSLENGS-DPNTNSSTQKRSNVAGERLNGRLE 277

Query: 808  ETSILNXXXXXXXXXXXXXXXXXXXXXXXXRDLQALRKAVRIQRERVRKACLELEKERLX 987
            + S                            D   LRK ++I+R +   A  EL+KER+ 
Sbjct: 278  DRSERKDDSEMQVPDVDEVF-----------DAMTLRKLIKIERRKANAAFAELDKERIA 326

Query: 988  XXXXXNETMAMIMRLQSEVSSIQMQANQYQRMAEQKQLHDQEVIHSLRWIVLKQESERSI 1167
                  E MAMI+RLQSE SS ++QANQ++RMAEQK  +D EVI SL W + + ES RS+
Sbjct: 327  ASSSAEEAMAMILRLQSEKSSAEIQANQFRRMAEQKLEYDDEVIESLEWTITRHESHRSV 386

Query: 1168 LESQLNLCNQE 1200
            LE QL +  +E
Sbjct: 387  LEEQLRVYREE 397


>ref|XP_002518341.1| conserved hypothetical protein [Ricinus communis]
            gi|223542561|gb|EEF44101.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 256

 Score =  108 bits (270), Expect = 4e-21
 Identities = 54/114 (47%), Positives = 81/114 (71%)
 Frame = +1

Query: 901  DLQALRKAVRIQRERVRKACLELEKERLXXXXXXNETMAMIMRLQSEVSSIQMQANQYQR 1080
            D+ ALR+ V+I+R+R   A LELEKER+      +E MAMI+RLQ E S I+++++ + +
Sbjct: 32   DVMALRRLVKIERQRADMANLELEKERMASASAADEAMAMILRLQREKSCIEIESSHHYK 91

Query: 1081 MAEQKQLHDQEVIHSLRWIVLKQESERSILESQLNLCNQERMMDWKAGDEDGLE 1242
            +AEQ Q +DQEVI SL+WI++K ESER++LE +L+LC Q+     K+ + D  E
Sbjct: 92   LAEQMQEYDQEVIQSLQWIIVKYESERTVLEEKLSLCKQKLKQYMKSDEMDQFE 145


>gb|ABW70156.1| DUF593-1 protein [Lotus japonicus]
          Length = 271

 Score =  107 bits (266), Expect = 1e-20
 Identities = 54/117 (46%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +1

Query: 901  DLQALRKAVRIQRERVRKACLELEKERLXXXXXXNETMAMIMRLQSEVSSIQMQANQYQR 1080
            D+ +LRK V+ +R+R   AC E+EKER        E MAMI+RLQSE S++++QANQ++R
Sbjct: 127  DVMSLRKLVKFERQRFHAACAEIEKERSAASSAAEEAMAMILRLQSEKSAVEIQANQFRR 186

Query: 1081 MAEQKQLHDQEVIHSLRWIVLKQESERSILESQLNLCNQERMMDWKAGDE-DGLEGI 1248
            M EQKQ +DQEVI SL+W V + E ++S++E Q+ L  +E++ ++   DE + +EG+
Sbjct: 187  MVEQKQEYDQEVIESLKWTVRQLEYQKSVMEEQV-LIYREKLREYMRDDEIEQIEGV 242


Top