BLASTX nr result
ID: Coptis23_contig00006753
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00006753 (382 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like s... 78 7e-13 ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinas... 78 7e-13 sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like... 78 7e-13 gb|AAN60252.1| unknown [Arabidopsis thaliana] 78 7e-13 ref|XP_002891752.1| leucine-rich repeat family protein [Arabidop... 77 1e-12 >gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like serine/threonine kinase from Arabidopsis thaliana gb|AF024648 and contains multiple leucine rich PF|00560 repeats and protein kinase PF|00069 domain. ESTs gb|T04455, gb|N38129 come from this gene [Arabidopsis thaliana] Length = 942 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/98 (40%), Positives = 63/98 (64%) Frame = -1 Query: 295 LNFLAISRRAVYTLLLLFIVLTVSGEFRSDAQAVIPTDELETLQRIFTKLGIRQWNVNQN 116 + F+ + + VY LLL+F+ L F S+AQ ++P DE++TL+ IF KL + N+ + Sbjct: 1 MGFIFSTEKVVYVLLLIFVCLE---NFGSNAQ-LLPEDEVQTLRTIFRKLQNQTVNIERT 56 Query: 115 SCRTGQGFNIATPGSSSDASSNVTCDCNFNASTICHVT 2 SC + Q +N +S+ +SN+TCDC FNAS++C VT Sbjct: 57 SC-SDQNWNFVVESASNSPTSNITCDCTFNASSVCRVT 93 >ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194818|gb|AEE32939.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] Length = 1030 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/98 (40%), Positives = 63/98 (64%) Frame = -1 Query: 295 LNFLAISRRAVYTLLLLFIVLTVSGEFRSDAQAVIPTDELETLQRIFTKLGIRQWNVNQN 116 + F+ + + VY LLL+F+ L F S+AQ ++P DE++TL+ IF KL + N+ + Sbjct: 1 MGFIFSTEKVVYVLLLIFVCLE---NFGSNAQ-LLPEDEVQTLRTIFRKLQNQTVNIERT 56 Query: 115 SCRTGQGFNIATPGSSSDASSNVTCDCNFNASTICHVT 2 SC + Q +N +S+ +SN+TCDC FNAS++C VT Sbjct: 57 SC-SDQNWNFVVESASNSPTSNITCDCTFNASSVCRVT 93 >sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53430; Flags: Precursor gi|224589438|gb|ACN59253.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] Length = 1038 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/98 (40%), Positives = 63/98 (64%) Frame = -1 Query: 295 LNFLAISRRAVYTLLLLFIVLTVSGEFRSDAQAVIPTDELETLQRIFTKLGIRQWNVNQN 116 + F+ + + VY LLL+F+ L F S+AQ ++P DE++TL+ IF KL + N+ + Sbjct: 1 MGFIFSTEKVVYVLLLIFVCLE---NFGSNAQ-LLPEDEVQTLRTIFRKLQNQTVNIERT 56 Query: 115 SCRTGQGFNIATPGSSSDASSNVTCDCNFNASTICHVT 2 SC + Q +N +S+ +SN+TCDC FNAS++C VT Sbjct: 57 SC-SDQNWNFVVESASNSPTSNITCDCTFNASSVCRVT 93 >gb|AAN60252.1| unknown [Arabidopsis thaliana] Length = 182 Score = 78.2 bits (191), Expect = 7e-13 Identities = 40/98 (40%), Positives = 63/98 (64%) Frame = -1 Query: 295 LNFLAISRRAVYTLLLLFIVLTVSGEFRSDAQAVIPTDELETLQRIFTKLGIRQWNVNQN 116 + F+ + + VY LLL+F+ L F S+AQ ++P DE++TL+ IF KL + N+ + Sbjct: 1 MGFIFSTEKVVYVLLLIFVCLE---NFGSNAQ-LLPEDEVQTLRTIFRKLQNQTVNIERT 56 Query: 115 SCRTGQGFNIATPGSSSDASSNVTCDCNFNASTICHVT 2 SC + Q +N +S+ +SN+TCDC FNAS++C VT Sbjct: 57 SC-SDQNWNFVVESASNSPTSNITCDCTFNASSVCRVT 93 >ref|XP_002891752.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297337594|gb|EFH68011.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata] Length = 1037 Score = 77.4 bits (189), Expect = 1e-12 Identities = 41/98 (41%), Positives = 62/98 (63%) Frame = -1 Query: 295 LNFLAISRRAVYTLLLLFIVLTVSGEFRSDAQAVIPTDELETLQRIFTKLGIRQWNVNQN 116 + F+ ++ VY LLL+FI L F S+AQ ++P DE++TL+ IF KL + N+ + Sbjct: 1 MGFIFSTKEVVYVLLLIFICLE---NFGSNAQ-LLPDDEVQTLRTIFRKLQNQTVNIERT 56 Query: 115 SCRTGQGFNIATPGSSSDASSNVTCDCNFNASTICHVT 2 SC T + +N S + +SN+TCDC FNAS++C VT Sbjct: 57 SC-TDENWNFVAGSSPNAVTSNITCDCTFNASSVCRVT 93