BLASTX nr result

ID: Coptis23_contig00006752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006752
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
emb|CBI20154.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine...    95   1e-17
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine...    95   1e-17
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...    95   1e-17

>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
           predicted protein [Populus trichocarpa]
          Length = 1015

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/59 (74%), Positives = 53/59 (89%)
 Frame = -2

Query: 178 FTGVLPETFGGLTNLTDFRIDGSGITGRIPDFIGNWTRLERLDMQGTNMEGPIPSNISL 2
           FTG +P+TFG L NLTDFRIDGS ++G+IP+FIGNWT +ERLD+QGT+MEGPIPS ISL
Sbjct: 205 FTGTIPDTFGNLKNLTDFRIDGSELSGKIPNFIGNWTNIERLDLQGTSMEGPIPSTISL 263



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
 Frame = -3

Query: 627 TICHVTSIQLKSLSLEGELPVDLANLTYLREIDLTRNFLNGSIPTRWAS-XXXXXXXXXX 451
           T+CHV S+ +K  +L G  P +  NLT+LREIDLTRN++NGSIP   A            
Sbjct: 95  TVCHVISLYMKGFNLTGVFPSEFRNLTHLREIDLTRNYINGSIPASLAELPNLQTLSLLA 154

Query: 450 XXXNGTIPREIGSIATLEELVLQD 379
               G+IPRE GS+ATLE LVL+D
Sbjct: 155 NRITGSIPREFGSMATLESLVLED 178


>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 43/59 (72%), Positives = 52/59 (88%)
 Frame = -2

Query: 178 FTGVLPETFGGLTNLTDFRIDGSGITGRIPDFIGNWTRLERLDMQGTNMEGPIPSNISL 2
           FTG +PETFG L NLTD R+DG+  +G+IPDFIGNWT+L+RLDMQGT+M+GPIPS ISL
Sbjct: 360 FTGTIPETFGNLKNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQGTSMDGPIPSTISL 418



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = -3

Query: 627 TICHVTSIQLKSLSLEGELPVDLANLTYLREIDLTRNFLNGSIPTRWASXXXXXXXXXXX 448
           T+CHVT+IQLK L+L G +P +  NLTYL+EIDLTRN+LNGSIPT  A            
Sbjct: 251 TVCHVTNIQLKGLNLTGIMPDEFGNLTYLQEIDLTRNYLNGSIPTSLAQIPLVTLSALGN 310

Query: 447 XXNGTIPREIGSIATLEELVLQD 379
             +G+IP+EIG IATLEELVL+D
Sbjct: 311 RLSGSIPKEIGDIATLEELVLED 333


>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like, partial [Cucumis sativus]
          Length = 993

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = -2

Query: 178 FTGVLPETFGGLTNLTDFRIDGSGITGRIPDFIGNWTRLERLDMQGTNMEGPIPSNIS 5
           FTG +P++FG LTNL DFR+DG+G++G+IP+FIGNW  L+RLDMQGT+ME PIPS IS
Sbjct: 158 FTGKIPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGTSMENPIPSTIS 215



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = -3

Query: 627 TICHVTSIQLKSLSLEGELPVDLANLTYLREIDLTRNFLNGSIPTRWASXXXXXXXXXXX 448
           T+CHVT + LK L+L G  P +  NLT+L+E+DLTRN +NG +P+  A+           
Sbjct: 49  TLCHVTIVLLKGLNLTGTFPAEFGNLTHLQELDLTRNHINGQLPSSLANAPLVKLSLLGN 108

Query: 447 XXNGTIPREIGSIATLEELVLQD 379
             NG+IP+EIG I TLEEL+L+D
Sbjct: 109 RLNGSIPKEIGEIGTLEELILED 131


>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53430-like [Cucumis sativus]
          Length = 1030

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = -2

Query: 178 FTGVLPETFGGLTNLTDFRIDGSGITGRIPDFIGNWTRLERLDMQGTNMEGPIPSNIS 5
           FTG +P++FG LTNL DFR+DG+G++G+IP+FIGNW  L+RLDMQGT+ME PIPS IS
Sbjct: 195 FTGKIPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGTSMENPIPSTIS 252



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = -3

Query: 627 TICHVTSIQLKSLSLEGELPVDLANLTYLREIDLTRNFLNGSIPTRWASXXXXXXXXXXX 448
           T+CHVT + LK L+L G  P +  NLT+L+E+DLTRN +NG +P+  A+           
Sbjct: 86  TLCHVTIVLLKGLNLTGTFPAEFGNLTHLQELDLTRNHINGQLPSSLANAPLVKLSLLGN 145

Query: 447 XXNGTIPREIGSIATLEELVLQD 379
             NG+IP+EIG I TLEEL+L+D
Sbjct: 146 RLNGSIPKEIGEIGTLEELILED 168


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 40/59 (67%), Positives = 51/59 (86%)
 Frame = -2

Query: 178 FTGVLPETFGGLTNLTDFRIDGSGITGRIPDFIGNWTRLERLDMQGTNMEGPIPSNISL 2
           FTG +PE FG L NLT+FRIDGS ++G+IP FIGNWT+LERLD+QGT++EGPIP  +S+
Sbjct: 200 FTGTIPEAFGNLKNLTNFRIDGSSLSGKIPSFIGNWTKLERLDLQGTSLEGPIPPAVSV 258



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = -3

Query: 627 TICHVTSIQLKSLSLEGELPVDLANLTYLREIDLTRNFLNGSIPTRWAS-XXXXXXXXXX 451
           T+CHVT I LK L++ G  P +  NLT+L+ +DLTRN++NGSIP                
Sbjct: 90  TVCHVTMIFLKGLNISGIFPSEFGNLTHLKTLDLTRNYINGSIPKSLGGLSSLVTLSLLG 149

Query: 450 XXXNGTIPREIGSIATLEELVLQD 379
              +G IP EIG I+TL+E+ ++D
Sbjct: 150 NRLSGPIPSEIGDISTLQEMNVED 173


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