BLASTX nr result

ID: Coptis23_contig00006748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006748
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256...   191   2e-46
ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-42
ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like iso...   173   4e-41
ref|XP_002512472.1| conserved hypothetical protein [Ricinus comm...   172   7e-41
ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycin...   167   4e-39

>ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256314 isoform 1 [Vitis
           vinifera] gi|359487500|ref|XP_003633604.1| PREDICTED:
           uncharacterized protein LOC100256314 isoform 2 [Vitis
           vinifera] gi|296089710|emb|CBI39529.3| unnamed protein
           product [Vitis vinifera]
          Length = 125

 Score =  191 bits (486), Expect = 2e-46
 Identities = 90/120 (75%), Positives = 110/120 (91%)
 Frame = -2

Query: 851 SSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVDGSYNLKIDTQHL 672
           SSA+K G LV+LQDL P+SPF K GASLRV GKLQ++SVETA+A+++DGS NLKI+TQHL
Sbjct: 3   SSAVKSGALVSLQDLQPSSPFFKQGASLRVTGKLQEYSVETAIAIVIDGSANLKINTQHL 62

Query: 671 RNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMSD 492
           R+++FR GSIYQFIGELLI+PD EA+LQAR+GRNVDGIDLNLY+QSLQL+RQFQ +HM+D
Sbjct: 63  RDLTFRAGSIYQFIGELLIQPDNEAILQARVGRNVDGIDLNLYHQSLQLVRQFQADHMND 122


>ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|222871690|gb|EEF08821.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  177 bits (448), Expect = 4e-42
 Identities = 83/121 (68%), Positives = 109/121 (90%)
 Frame = -2

Query: 854 SSSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVDGSYNLKIDTQH 675
           ++ AIK G LVTL++L+P+SPF K GAS+RV GKLQ+++VETA+AV+ DG+  LKIDTQH
Sbjct: 2   AAMAIKHGELVTLEELNPSSPFFKQGASVRVTGKLQEYTVETAIAVVADGNATLKIDTQH 61

Query: 674 LRNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMS 495
           LR+ISFR+GS+YQFIGELLI+PD+EA+LQAR+GR  DGIDL+LY+QSLQLLRQFQ +H++
Sbjct: 62  LRDISFRIGSVYQFIGELLIQPDSEAILQARVGRIADGIDLSLYHQSLQLLRQFQADHLN 121

Query: 494 D 492
           +
Sbjct: 122 N 122


>ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like isoform 1 [Cucumis
           sativus] gi|449454055|ref|XP_004144771.1| PREDICTED: CST
           complex subunit TEN1-like isoform 2 [Cucumis sativus]
           gi|449490870|ref|XP_004158731.1| PREDICTED: CST complex
           subunit TEN1-like isoform 1 [Cucumis sativus]
           gi|449490872|ref|XP_004158732.1| PREDICTED: CST complex
           subunit TEN1-like isoform 2 [Cucumis sativus]
          Length = 126

 Score =  173 bits (439), Expect = 4e-41
 Identities = 86/123 (69%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
 Frame = -2

Query: 848 SAIKPGILVTLQDL-HPTSPFLKNGASLRVVGKLQDFSVETAVAVIVDGSYNLKIDTQHL 672
           SAIK G LV+L+DL HP+S F K+GASLRV GKL ++SVETA+A+IVDG+ NLKIDTQHL
Sbjct: 4   SAIKSGALVSLKDLMHPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHL 63

Query: 671 RNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMSD 492
             +S R+GSIYQFIGELL++ D EA+L+AR+GRNVDGIDLNLY+QSLQLLRQFQ +H++ 
Sbjct: 64  IELSIRIGSIYQFIGELLVQSDNEAILKARVGRNVDGIDLNLYHQSLQLLRQFQADHLNK 123

Query: 491 *NN 483
             N
Sbjct: 124 RTN 126


>ref|XP_002512472.1| conserved hypothetical protein [Ricinus communis]
           gi|223548433|gb|EEF49924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  172 bits (437), Expect = 7e-41
 Identities = 82/116 (70%), Positives = 102/116 (87%)
 Frame = -2

Query: 845 AIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVDGSYNLKIDTQHLRN 666
           AIK G LVTL DLHP+SPF K G+S+R+ GKLQ+++V+TA+A I DG+  LKIDTQHL +
Sbjct: 5   AIKHGELVTLLDLHPSSPFFKQGSSIRITGKLQEYTVDTAIARIADGNAILKIDTQHLSD 64

Query: 665 ISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHM 498
           +SFR+GS+YQFIGELLI+PD EA+LQAR+GRNVDGIDLNLY QSLQLLRQF+ +H+
Sbjct: 65  LSFRIGSVYQFIGELLIQPDDEAILQARVGRNVDGIDLNLYNQSLQLLRQFEADHI 120


>ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycine max]
           gi|255625773|gb|ACU13231.1| unknown [Glycine max]
          Length = 126

 Score =  167 bits (422), Expect = 4e-39
 Identities = 79/121 (65%), Positives = 101/121 (83%)
 Frame = -2

Query: 854 SSSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVETAVAVIVDGSYNLKIDTQH 675
           +S  IK G LV+LQDL P+SPF K GASLR+ GKL ++S+ET +A I+DG   LK+ T+H
Sbjct: 2   ASLEIKSGALVSLQDLRPSSPFFKQGASLRITGKLHEYSIETGLATIIDGDDILKVSTKH 61

Query: 674 LRNISFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRQFQGEHMS 495
           LR+++F+VGS+YQFIGELLI+PD E VLQAR+GRNVDGIDLNLY+QSL LLRQFQ  H++
Sbjct: 62  LRDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQTNHLN 121

Query: 494 D 492
           +
Sbjct: 122 N 122


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