BLASTX nr result

ID: Coptis23_contig00006728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006728
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547774.1| PREDICTED: uncharacterized protein LOC100800...    96   4e-18
ref|XP_002303235.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003529837.1| PREDICTED: uncharacterized protein LOC100807...    94   1e-17
ref|XP_002272507.2| PREDICTED: uncharacterized protein LOC100266...    94   1e-17
emb|CBI35852.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_003547774.1| PREDICTED: uncharacterized protein LOC100800164 [Glycine max]
          Length = 664

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/67 (70%), Positives = 56/67 (83%)
 Frame = -2

Query: 204 ALGSRLPSFASAREKVAGAEGILRPVSKGTRVVIKGARNVAQAAWFRPALNISSWSCMGA 25
           ALGSRLPS A+AR KVAGA  IL+PVS GT+VV+K A+++AQAAW RP LN+SSWSCMG 
Sbjct: 361 ALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWARPNLNLSSWSCMGP 420

Query: 24  RHRVTTA 4
           R RV +A
Sbjct: 421 RRRVMSA 427


>ref|XP_002303235.1| predicted protein [Populus trichocarpa] gi|222840667|gb|EEE78214.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/69 (71%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
 Frame = -2

Query: 204 ALGSRLPSFASAREKVAGAEGILRPVSKGTRVVIKGARNVAQAAW-FRPALNISSWSCMG 28
           ALGSRLPS ASAR KVAGA  ILRPVS GT+VV+K A+++AQAAW  RP+L +SSWSC+G
Sbjct: 364 ALGSRLPSIASARAKVAGAGAILRPVSNGTQVVMKRAQSMAQAAWTTRPSLQLSSWSCIG 423

Query: 27  ARHRVTTAS 1
            RHR T AS
Sbjct: 424 PRHRATAAS 432


>ref|XP_003529837.1| PREDICTED: uncharacterized protein LOC100807086 [Glycine max]
          Length = 657

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = -2

Query: 204 ALGSRLPSFASAREKVAGAEGILRPVSKGTRVVIKGARNVAQAAWFRPALNISSWSCMGA 25
           ALGSRLPS A+AR KVAGA  IL+PVS GT+VV+K A+++AQAAW RP LN+SSWSCMG 
Sbjct: 358 ALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAQAAWARPNLNLSSWSCMGP 417

Query: 24  RHRVTTA 4
           R R  +A
Sbjct: 418 RRRAMSA 424


>ref|XP_002272507.2| PREDICTED: uncharacterized protein LOC100266986 [Vitis vinifera]
          Length = 688

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = -2

Query: 204 ALGSRLPSFASAREKVAGAEGILRPVSKGTRVVIKGARNVAQAAWFRPALNISSWSCMGA 25
           AL SRLPS ASA+ KVAGA  ILRPVS  TRVV++ A+++AQAAW RPAL +SSWSCMG 
Sbjct: 381 ALSSRLPSIASAKAKVAGAGAILRPVSSSTRVVMRRAQSMAQAAWIRPAL-LSSWSCMGP 439

Query: 24  RHRVTTAS 1
           RHRVT  S
Sbjct: 440 RHRVTAVS 447


>emb|CBI35852.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = -2

Query: 204 ALGSRLPSFASAREKVAGAEGILRPVSKGTRVVIKGARNVAQAAWFRPALNISSWSCMGA 25
           AL SRLPS ASA+ KVAGA  ILRPVS  TRVV++ A+++AQAAW RPAL +SSWSCMG 
Sbjct: 357 ALSSRLPSIASAKAKVAGAGAILRPVSSSTRVVMRRAQSMAQAAWIRPAL-LSSWSCMGP 415

Query: 24  RHRVTTAS 1
           RHRVT  S
Sbjct: 416 RHRVTAVS 423


Top