BLASTX nr result

ID: Coptis23_contig00006727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006727
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272507.2| PREDICTED: uncharacterized protein LOC100266...    51   9e-10
emb|CBI35852.3| unnamed protein product [Vitis vinifera]               51   9e-10
ref|XP_002303235.1| predicted protein [Populus trichocarpa] gi|2...    47   1e-09
ref|XP_004164136.1| PREDICTED: uncharacterized protein LOC101228...    46   3e-09
ref|XP_004144431.1| PREDICTED: uncharacterized protein LOC101203...    46   3e-09

>ref|XP_002272507.2| PREDICTED: uncharacterized protein LOC100266986 [Vitis vinifera]
          Length = 688

 Score = 51.2 bits (121), Expect(2) = 9e-10
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = +3

Query: 21  GNLHVASVFGGKDSVQVIGPEVTSEXXXXXXXXXXXCWHFSKK 149
           GNLHV SVFGG+DS+Q+ GPE+ +E           CWHFSKK
Sbjct: 122 GNLHVGSVFGGEDSLQLKGPEIIAE-LRYLLNLLTLCWHFSKK 163



 Score = 36.6 bits (83), Expect(2) = 9e-10
 Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = +1

Query: 148 KKPFPLFLEETSY-FEDVFLQEPEAGL 225
           KKPF LFLEET Y  E+V L EP+AG+
Sbjct: 162 KKPFLLFLEETGYSIENVLLHEPKAGI 188


>emb|CBI35852.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 51.2 bits (121), Expect(2) = 9e-10
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = +3

Query: 21  GNLHVASVFGGKDSVQVIGPEVTSEXXXXXXXXXXXCWHFSKK 149
           GNLHV SVFGG+DS+Q+ GPE+ +E           CWHFSKK
Sbjct: 98  GNLHVGSVFGGEDSLQLKGPEIIAE-LRYLLNLLTLCWHFSKK 139



 Score = 36.6 bits (83), Expect(2) = 9e-10
 Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
 Frame = +1

Query: 148 KKPFPLFLEETSY-FEDVFLQEPEAGL 225
           KKPF LFLEET Y  E+V L EP+AG+
Sbjct: 138 KKPFLLFLEETGYSIENVLLHEPKAGI 164


>ref|XP_002303235.1| predicted protein [Populus trichocarpa] gi|222840667|gb|EEE78214.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score = 47.0 bits (110), Expect(2) = 1e-09
 Identities = 24/43 (55%), Positives = 27/43 (62%)
 Frame = +3

Query: 21  GNLHVASVFGGKDSVQVIGPEVTSEXXXXXXXXXXXCWHFSKK 149
           G LHV SVFGG+DSVQ+ G EV +E           CWHFSKK
Sbjct: 105 GTLHVGSVFGGEDSVQLKGLEVAAE-LRYLLNLLTLCWHFSKK 146



 Score = 40.4 bits (93), Expect(2) = 1e-09
 Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
 Frame = +1

Query: 148 KKPFPLFLEETSYFED-VFLQEPEAGL 225
           KKPFPLFLEET + E+ V LQEP+AG+
Sbjct: 145 KKPFPLFLEETGFTEESVLLQEPKAGI 171


>ref|XP_004164136.1| PREDICTED: uncharacterized protein LOC101228936 [Cucumis sativus]
          Length = 657

 Score = 45.8 bits (107), Expect(2) = 3e-09
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = +3

Query: 21  GNLHVASVFGGKDSVQVIGPEVTSEXXXXXXXXXXXCWHFSKK 149
           GNLHV SVFG +DS+Q+ G E+ +E           CWHFSKK
Sbjct: 101 GNLHVGSVFGNEDSIQLKGTEMITE-LKYLLHLLTLCWHFSKK 142



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
 Frame = +1

Query: 148 KKPFPLFLEETSYF-EDVFLQEPEAGL 225
           KKPFPLFLEET +  E+V LQEP+AG+
Sbjct: 141 KKPFPLFLEETGFSKENVLLQEPKAGI 167


>ref|XP_004144431.1| PREDICTED: uncharacterized protein LOC101203983 [Cucumis sativus]
          Length = 657

 Score = 45.8 bits (107), Expect(2) = 3e-09
 Identities = 22/43 (51%), Positives = 27/43 (62%)
 Frame = +3

Query: 21  GNLHVASVFGGKDSVQVIGPEVTSEXXXXXXXXXXXCWHFSKK 149
           GNLHV SVFG +DS+Q+ G E+ +E           CWHFSKK
Sbjct: 101 GNLHVGSVFGNEDSIQLKGTEMITE-LKYLLHLLTLCWHFSKK 142



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
 Frame = +1

Query: 148 KKPFPLFLEETSYF-EDVFLQEPEAGL 225
           KKPFPLFLEET +  E+V LQEP+AG+
Sbjct: 141 KKPFPLFLEETGFSKENVLLQEPKAGI 167


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