BLASTX nr result

ID: Coptis23_contig00006716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006716
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265...   454   e-125
emb|CBI35241.3| unnamed protein product [Vitis vinifera]              444   e-122
ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791...   434   e-119
ref|XP_002315444.1| predicted protein [Populus trichocarpa] gi|2...   418   e-114
ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208...   412   e-112

>ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
          Length = 409

 Score =  454 bits (1167), Expect = e-125
 Identities = 228/319 (71%), Positives = 262/319 (82%), Gaps = 7/319 (2%)
 Frame = -3

Query: 999  QQQHWMVIMKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDID 820
            +Q+HWMV M+ P + L+SK+E IDYYV+TL  VL SEK+AQMCIY+ASW   FGFCCDID
Sbjct: 90   RQRHWMVQMEAPPQVLRSKAEIIDYYVRTLETVLGSEKDAQMCIYDASWDAPFGFCCDID 149

Query: 819  DETRRALILLPEVLSIRPDLNVDSTEKDYSLSNLQLSSLFDSTSGTSGLFSERKSKYWIV 640
             ET R L  L  VLS++PD N +S +KDY+ SN+QL S+ +S  G+  LF    SKYW+V
Sbjct: 150  AETSRELSGLQGVLSVKPDPNFNSVKKDYTFSNIQLGSVSNSDIGSPQLFPAGNSKYWLV 209

Query: 639  RMDKPSVEVVTKAQMVDHYAQVLTKVLGNEKDAQMCIYHISWQNNFGFCCELDEECAQEL 460
            +MD+P+V VVTKAQMVD YAQ+LTKVLGNEKDAQMCIYHISWQ++FGFCCELDEECA+EL
Sbjct: 210  QMDRPTVGVVTKAQMVDFYAQILTKVLGNEKDAQMCIYHISWQSDFGFCCELDEECAREL 269

Query: 459  AGVPGVLSVQQDENFGSEYKNYGGDGNLQNSAET-------QAPSIKTKRLFVTGLSFYT 301
            AGVPGVLSV+ DENF S  K+YGG G+LQNS ++       Q  +IKTK+LFVTGLSFYT
Sbjct: 270  AGVPGVLSVRPDENFESNNKDYGG-GSLQNSTDSLDSMEANQPTNIKTKKLFVTGLSFYT 328

Query: 300  SEKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIEYTTEEAAGTALKEMNGKIINGWMI 121
            SEKTLR AFEG+GELVEVKIIMDKISKRSKGYAFIEYTTEEAA  ALKEMNGKIINGWMI
Sbjct: 329  SEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMI 388

Query: 120  VVDVAKTNPPKYSRGSPRP 64
            VVDVAK  P KYSR  PRP
Sbjct: 389  VVDVAKPTPQKYSRSRPRP 407



 Score =  109 bits (272), Expect = 2e-21
 Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 3/146 (2%)
 Frame = -3

Query: 732 SLSNLQLSSLFDSTSGTSGLFSE---RKSKYWIVRMDKPSVEVVTKAQMVDHYAQVLTKV 562
           S S+   +++  ST+ TS  FS     + ++W+V+M+ P   + +KA+++D+Y + L  V
Sbjct: 63  SSSSTATNAVSASTTSTSLAFSASAGERQRHWMVQMEAPPQVLRSKAEIIDYYVRTLETV 122

Query: 561 LGNEKDAQMCIYHISWQNNFGFCCELDEECAQELAGVPGVLSVQQDENFGSEYKNYGGDG 382
           LG+EKDAQMCIY  SW   FGFCC++D E ++EL+G+ GVLSV+ D NF S  K+Y    
Sbjct: 123 LGSEKDAQMCIYDASWDAPFGFCCDIDAETSRELSGLQGVLSVKPDPNFNSVKKDY-TFS 181

Query: 381 NLQNSAETQAPSIKTKRLFVTGLSFY 304
           N+Q  + + +  I + +LF  G S Y
Sbjct: 182 NIQLGSVSNS-DIGSPQLFPAGNSKY 206


>emb|CBI35241.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  444 bits (1141), Expect = e-122
 Identities = 225/314 (71%), Positives = 257/314 (81%), Gaps = 7/314 (2%)
 Frame = -3

Query: 984 MVIMKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDIDDETRR 805
           MV M+ P + L+SK+E IDYYV+TL  VL SEK+AQMCIY+ASW   FGFCCDID ET R
Sbjct: 1   MVQMEAPPQVLRSKAEIIDYYVRTLETVLGSEKDAQMCIYDASWDAPFGFCCDIDAETSR 60

Query: 804 ALILLPEVLSIRPDLNVDSTEKDYSLSNLQLSSLFDSTSGTSGLFSERKSKYWIVRMDKP 625
            L  L  VLS++PD N +S +KDY+ SN+QL S+ +S  G+  LF    SKYW+V+MD+P
Sbjct: 61  ELSGLQGVLSVKPDPNFNSVKKDYTFSNIQLGSVSNSDIGSPQLFPAGNSKYWLVQMDRP 120

Query: 624 SVEVVTKAQMVDHYAQVLTKVLGNEKDAQMCIYHISWQNNFGFCCELDEECAQELAGVPG 445
           +V VVTKAQMVD YAQ+LTKVLGNEKDAQMCIYHISWQ++FGFCCELDEECA+ELAGVPG
Sbjct: 121 TVGVVTKAQMVDFYAQILTKVLGNEKDAQMCIYHISWQSDFGFCCELDEECARELAGVPG 180

Query: 444 VLSVQQDENFGSEYKNYGGDGNLQNSAET-------QAPSIKTKRLFVTGLSFYTSEKTL 286
           VLSV+ DENF S  K+YGG G+LQNS ++       Q  +IKTK+LFVTGLSFYTSEKTL
Sbjct: 181 VLSVRPDENFESNNKDYGG-GSLQNSTDSLDSMEANQPTNIKTKKLFVTGLSFYTSEKTL 239

Query: 285 RAAFEGYGELVEVKIIMDKISKRSKGYAFIEYTTEEAAGTALKEMNGKIINGWMIVVDVA 106
           R AFEG+GELVEVKIIMDKISKRSKGYAFIEYTTEEAA  ALKEMNGKIINGWMIVVDVA
Sbjct: 240 RGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKIINGWMIVVDVA 299

Query: 105 KTNPPKYSRGSPRP 64
           K  P KYSR  PRP
Sbjct: 300 KPTPQKYSRSRPRP 313



 Score =  105 bits (262), Expect = 3e-20
 Identities = 46/96 (47%), Positives = 70/96 (72%)
 Frame = -3

Query: 993 QHWMVIMKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDIDDE 814
           ++W+V M RP   + +K++ +D+Y + L++VL +EK+AQMCIY+ SWQ+ FGFCC++D+E
Sbjct: 111 KYWLVQMDRPTVGVVTKAQMVDFYAQILTKVLGNEKDAQMCIYHISWQSDFGFCCELDEE 170

Query: 813 TRRALILLPEVLSIRPDLNVDSTEKDYSLSNLQLSS 706
             R L  +P VLS+RPD N +S  KDY   +LQ S+
Sbjct: 171 CARELAGVPGVLSVRPDENFESNNKDYGGGSLQNST 206


>ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
          Length = 386

 Score =  434 bits (1116), Expect = e-119
 Identities = 214/309 (69%), Positives = 249/309 (80%), Gaps = 2/309 (0%)
 Frame = -3

Query: 999  QQQHWMVIMKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDID 820
            Q  HWMV+M  P + + SK + IDYYVKTL  VL SEK+AQMCIY+ASW   FGFCCDID
Sbjct: 74   QNPHWMVLMDTPPQGVNSKPQVIDYYVKTLQTVLGSEKDAQMCIYDASWNTHFGFCCDID 133

Query: 819  DETRRALILLPEVLSIRPDLNVDSTEKDYSLSNLQLSSLFDSTSGTSGLFSERKSKYWIV 640
            +E    L  LPEVL +RPDL  +S +KDYSLS+ +   L    + T+ LF    SK+W+V
Sbjct: 134  EEISAQLASLPEVLLVRPDLEFNSLKKDYSLSSGEAGHLSGLRTRTNMLFPAGNSKHWLV 193

Query: 639  RMDKPSVEVVTKAQMVDHYAQVLTKVLGNEKDAQMCIYHISWQNNFGFCCELDEECAQEL 460
            +MDKP VE VTKAQ+VD+YAQ+LTKV+GNEKDAQMCIYH+SW+ NFGFCCELDE+CAQEL
Sbjct: 194  KMDKPGVEAVTKAQIVDYYAQILTKVMGNEKDAQMCIYHVSWKTNFGFCCELDEDCAQEL 253

Query: 459  AGVPGVLSVQQDENFGSEYKNYGGDG-NLQNSAE-TQAPSIKTKRLFVTGLSFYTSEKTL 286
            AGV GVLSVQ D NF SE K+Y  +  N+ NS+E +Q   +KTK+LFVTGLSFYTSEKTL
Sbjct: 254  AGVLGVLSVQPDNNFESENKDYAENSWNVSNSSEASQEAPLKTKKLFVTGLSFYTSEKTL 313

Query: 285  RAAFEGYGELVEVKIIMDKISKRSKGYAFIEYTTEEAAGTALKEMNGKIINGWMIVVDVA 106
            RAAFEG+GELVEVK+IMDKISKRSKGYAF+EYTTEEAA  ALKEMNGKIINGWMIVVDVA
Sbjct: 314  RAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKIINGWMIVVDVA 373

Query: 105  KTNPPKYSR 79
            K NPP+Y R
Sbjct: 374  KPNPPRYHR 382



 Score =  100 bits (249), Expect = 8e-19
 Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
 Frame = -3

Query: 789 PEVLSIRPDLNVDSTEKDYSLS-------NLQLSSLFDSTSGTSGLFSERKSKYWIVRMD 631
           P++  +  ++ + +    +SLS       N  ++ +  +T+  S   S  ++ +W+V MD
Sbjct: 24  PQIHELPLNIRLPNKTNHFSLSSSSSPCCNWSITRVAAATTYPSFNPSTTQNPHWMVLMD 83

Query: 630 KPSVEVVTKAQMVDHYAQVLTKVLGNEKDAQMCIYHISWQNNFGFCCELDEECAQELAGV 451
            P   V +K Q++D+Y + L  VLG+EKDAQMCIY  SW  +FGFCC++DEE + +LA +
Sbjct: 84  TPPQGVNSKPQVIDYYVKTLQTVLGSEKDAQMCIYDASWNTHFGFCCDIDEEISAQLASL 143

Query: 450 PGVLSVQQDENFGSEYKNY 394
           P VL V+ D  F S  K+Y
Sbjct: 144 PEVLLVRPDLEFNSLKKDY 162


>ref|XP_002315444.1| predicted protein [Populus trichocarpa] gi|222864484|gb|EEF01615.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  418 bits (1074), Expect = e-114
 Identities = 211/310 (68%), Positives = 251/310 (80%), Gaps = 7/310 (2%)
 Frame = -3

Query: 975 MKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDIDDETRRALI 796
           M+ P + + SK E IDYYVKTL R L SE +AQMCIY+A +   FGFCCDID++    L 
Sbjct: 1   METPPKGVNSKPEIIDYYVKTLERALGSEIDAQMCIYDACYDTHFGFCCDIDEDASLELA 60

Query: 795 LLPEVLSIRPDLNVDSTEKDYSLSNLQLSSLFDSTSGTSGLFSERKSKYWIVRMDKPSVE 616
            LP VLS+RPD + +S EKDYS S ++LS+L +   G+  LF    +K+W+VR+DKP V 
Sbjct: 61  RLPGVLSVRPDPDYNSVEKDYS-SGVKLSTLSNPQIGSKLLFPSGNTKHWLVRIDKPGVG 119

Query: 615 VVTKAQMVDHYAQVLTKVLGNEKDAQMCIYHISWQNNFGFCCELDEECAQELAGVPGVLS 436
           VVTKAQMVD+YAQ+LTKV+G EKDAQMCIYH+SWQ+NFGFCCELDEECAQELAGVPGVLS
Sbjct: 120 VVTKAQMVDYYAQILTKVMGYEKDAQMCIYHVSWQSNFGFCCELDEECAQELAGVPGVLS 179

Query: 435 VQQDENFGSEYKNYGGDGNLQNSAE-------TQAPSIKTKRLFVTGLSFYTSEKTLRAA 277
           V  D++F SE K+Y GD +L NSA        +Q   ++TK+LF+TGLSFYTSEKTLRAA
Sbjct: 180 VLPDKDFESENKDYRGD-SLINSANPPDSSEASQITHVRTKKLFITGLSFYTSEKTLRAA 238

Query: 276 FEGYGELVEVKIIMDKISKRSKGYAFIEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTN 97
           FEG+GELVEVKIIMDKISKRSKGYAF++YTTEEAA +ALKEMNGKIINGWMIVVDVAK+N
Sbjct: 239 FEGFGELVEVKIIMDKISKRSKGYAFVKYTTEEAASSALKEMNGKIINGWMIVVDVAKSN 298

Query: 96  PPKYSRGSPR 67
           PP+YSRG PR
Sbjct: 299 PPRYSRGRPR 308



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 48/131 (36%), Positives = 80/131 (61%)
 Frame = -3

Query: 993 QHWMVIMKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDIDDE 814
           +HW+V + +P   + +K++ +DYY + L++V+  EK+AQMCIY+ SWQ+ FGFCC++D+E
Sbjct: 107 KHWLVRIDKPGVGVVTKAQMVDYYAQILTKVMGYEKDAQMCIYHVSWQSNFGFCCELDEE 166

Query: 813 TRRALILLPEVLSIRPDLNVDSTEKDYSLSNLQLSSLFDSTSGTSGLFSERKSKYWIVRM 634
             + L  +P VLS+ PD + +S  KDY   +L  S+    +S  S +   R  K +I  +
Sbjct: 167 CAQELAGVPGVLSVLPDKDFESENKDYRGDSLINSANPPDSSEASQITHVRTKKLFITGL 226

Query: 633 DKPSVEVVTKA 601
              + E   +A
Sbjct: 227 SFYTSEKTLRA 237


>ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
          Length = 394

 Score =  412 bits (1058), Expect = e-112
 Identities = 202/311 (64%), Positives = 246/311 (79%), Gaps = 6/311 (1%)
 Frame = -3

Query: 999  QQQHWMVIMKRPKEELQSKSEAIDYYVKTLSRVLESEKEAQMCIYNASWQNQFGFCCDID 820
            + +HW V+M+RP   L SK + IDYYVK L RVL SEK+AQMCIY+ASW  +FGFCCDID
Sbjct: 79   ENRHWRVLMERPPSGLNSKPQVIDYYVKALERVLGSEKDAQMCIYDASWDTRFGFCCDID 138

Query: 819  DETRRALILLPEVLSIRPDLNVDSTEKDYSLSNLQLSSLFDSTSGTSGLFSERKSKYWIV 640
            ++    L  +P V+S+ PD N  S EKD   S   L+    S +G+  LF    +K+W+V
Sbjct: 139  EQASIELARVPGVISVEPDPNFSSIEKDNGSSTPPLNLKSYSQNGSRVLFPLGNTKHWLV 198

Query: 639  RMDKPSVEVVTKAQMVDHYAQVLTKVLGNEKDAQMCIYHISWQNNFGFCCELDEECAQEL 460
            R+DKP + VVTKAQMVD+Y ++LTKVLGN+KDAQMCIYH+SWQ++FGFCCELDEECA+EL
Sbjct: 199  RIDKPGIGVVTKAQMVDYYVEILTKVLGNDKDAQMCIYHVSWQSSFGFCCELDEECAREL 258

Query: 459  AGVPGVLSVQQDENFGSEYKNYGGD-----GNLQNSAET-QAPSIKTKRLFVTGLSFYTS 298
            AGVPGVLSVQ D NF +E K+YGG+      +L +S+ T Q   +KTK+LF+TGLSFYTS
Sbjct: 259  AGVPGVLSVQLDANFEAENKDYGGNIAKNPSDLPDSSGTHQTTPVKTKKLFITGLSFYTS 318

Query: 297  EKTLRAAFEGYGELVEVKIIMDKISKRSKGYAFIEYTTEEAAGTALKEMNGKIINGWMIV 118
            EKTLRAAFEG+G+LVEVKIIMDKISKRSKGYAF+EYTTEEAA  ALKEMNGKIINGWMIV
Sbjct: 319  EKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKIINGWMIV 378

Query: 117  VDVAKTNPPKY 85
            VD+AK +P +Y
Sbjct: 379  VDIAKPSPRRY 389


Top