BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006709
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305841.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-47
ref|XP_002301730.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-45
ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   112   3e-45
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   110   8e-45
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   110   8e-45

>ref|XP_002305841.1| predicted protein [Populus trichocarpa] gi|222848805|gb|EEE86352.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  118 bits (295), Expect(2) = 6e-47
 Identities = 55/64 (85%), Positives = 59/64 (92%)
 Frame = -1

Query: 415 LSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITGTE 236
           LSVV+MKNGRKVICG+QNG LLLYSWG+FKDCSDRFTG   NSID LLKLDEDRVITG+E
Sbjct: 181 LSVVIMKNGRKVICGSQNGTLLLYSWGFFKDCSDRFTGLSPNSIDALLKLDEDRVITGSE 240

Query: 235 NGLI 224
           NGLI
Sbjct: 241 NGLI 244



 Score = 94.7 bits (234), Expect(2) = 6e-47
 Identities = 43/50 (86%), Positives = 49/50 (98%)
 Frame = -2

Query: 150 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 1
           +ENGLISL+GILPNRIIQP+AEHSEYP+E LA+SHDRKFLGSISHDQ+LK
Sbjct: 239 SENGLISLLGILPNRIIQPLAEHSEYPIEHLAFSHDRKFLGSISHDQVLK 288


>ref|XP_002301730.1| predicted protein [Populus trichocarpa] gi|222843456|gb|EEE81003.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  115 bits (289), Expect(2) = 2e-45
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = -1

Query: 415 LSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITGTE 236
           LSVV+MKNGRKVICG+QNG LLLYSWG+FKDCSDRFT    NSID LLKLDEDRVITG+E
Sbjct: 181 LSVVIMKNGRKVICGSQNGTLLLYSWGFFKDCSDRFTALSPNSIDTLLKLDEDRVITGSE 240

Query: 235 NGLI 224
           NGLI
Sbjct: 241 NGLI 244



 Score = 92.0 bits (227), Expect(2) = 2e-45
 Identities = 41/50 (82%), Positives = 49/50 (98%)
 Frame = -2

Query: 150 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 1
           +ENGLISL+GILPNR+IQP+AEHSEYP+E LA+SHDRK+LGSISHDQ+LK
Sbjct: 239 SENGLISLLGILPNRVIQPLAEHSEYPIECLAFSHDRKYLGSISHDQVLK 288


>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|297743547|emb|CBI36414.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  112 bits (279), Expect(2) = 3e-45
 Identities = 52/64 (81%), Positives = 57/64 (89%)
 Frame = -1

Query: 415 LSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITGTE 236
           LSVV+MKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     NS+D LLKLDEDRVITG+E
Sbjct: 182 LSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITGSE 241

Query: 235 NGLI 224
           NGLI
Sbjct: 242 NGLI 245



 Score = 95.1 bits (235), Expect(2) = 3e-45
 Identities = 45/50 (90%), Positives = 49/50 (98%)
 Frame = -2

Query: 150 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 1
           +ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLK
Sbjct: 240 SENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLK 289


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  110 bits (275), Expect(2) = 8e-45
 Identities = 50/64 (78%), Positives = 57/64 (89%)
 Frame = -1

Query: 415 LSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITGTE 236
           LSVVLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF    SNSID +LKLDEDR+ITG+E
Sbjct: 245 LSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRIITGSE 304

Query: 235 NGLI 224
           NG+I
Sbjct: 305 NGMI 308



 Score = 95.1 bits (235), Expect(2) = 8e-45
 Identities = 43/50 (86%), Positives = 49/50 (98%)
 Frame = -2

Query: 150 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 1
           +ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLK
Sbjct: 303 SENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLK 352


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|298205166|emb|CBI17225.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  110 bits (275), Expect(2) = 8e-45
 Identities = 52/64 (81%), Positives = 56/64 (87%)
 Frame = -1

Query: 415 LSVVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITGTE 236
           LSVVLMKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     NS+D LLKLDED VITG+E
Sbjct: 182 LSVVLMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDSVITGSE 241

Query: 235 NGLI 224
           NGLI
Sbjct: 242 NGLI 245



 Score = 95.1 bits (235), Expect(2) = 8e-45
 Identities = 45/50 (90%), Positives = 49/50 (98%)
 Frame = -2

Query: 150 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLK 1
           +ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLK
Sbjct: 240 SENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLK 289