BLASTX nr result

ID: Coptis23_contig00006706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006706
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31783.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002262805.1| PREDICTED: uncharacterized protein LOC100258...    79   4e-13
ref|XP_002301339.1| predicted protein [Populus trichocarpa] gi|1...    77   1e-12
ref|XP_002320108.1| predicted protein [Populus trichocarpa] gi|1...    77   1e-12
ref|NP_567180.1| uncharacterized protein [Arabidopsis thaliana] ...    76   3e-12

>emb|CBI31783.3| unnamed protein product [Vitis vinifera]
          Length = 62

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 PKALKKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRPHHPVR 3
           P    KHWKRNTAIAMFGVFL+CIPIAM SA+LEQRPHHPVR
Sbjct: 5   PNCRPKHWKRNTAIAMFGVFLICIPIAMKSAELEQRPHHPVR 46


>ref|XP_002262805.1| PREDICTED: uncharacterized protein LOC100258376 [Vitis vinifera]
          Length = 80

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 PKALKKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRPHHPVR 3
           P    KHWKRNTAIAMFGVFL+CIPIAM SA+LEQRPHHPVR
Sbjct: 23  PNCRPKHWKRNTAIAMFGVFLICIPIAMKSAELEQRPHHPVR 64


>ref|XP_002301339.1| predicted protein [Populus trichocarpa] gi|118489365|gb|ABK96487.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222843065|gb|EEE80612.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 PKALKKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRPHHPVR 3
           P    KHW+RNTAIAMFGVFL+CIPIAM SA+LEQRPHHPVR
Sbjct: 30  PYCRPKHWRRNTAIAMFGVFLICIPIAMKSAELEQRPHHPVR 71


>ref|XP_002320108.1| predicted protein [Populus trichocarpa] gi|118483711|gb|ABK93749.1|
           unknown [Populus trichocarpa]
           gi|222860881|gb|EEE98423.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 PKALKKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRPHHPVR 3
           P    KHW+RNTAIAMFGVFL+CIPIAM SA+LEQRPHHPVR
Sbjct: 30  PYCRPKHWRRNTAIAMFGVFLICIPIAMKSAELEQRPHHPVR 71


>ref|NP_567180.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17380736|gb|AAL36198.1| unknown protein [Arabidopsis
           thaliana] gi|20258925|gb|AAM14178.1| unknown protein
           [Arabidopsis thaliana] gi|26452418|dbj|BAC43294.1|
           unknown protein [Arabidopsis thaliana]
           gi|332656505|gb|AEE81905.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 88

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/42 (83%), Positives = 36/42 (85%)
 Frame = -3

Query: 128 PKALKKHWKRNTAIAMFGVFLVCIPIAMLSAKLEQRPHHPVR 3
           P    KHW+RNTAIAMFGVFLVCIPIA LSAKLEQRPH PVR
Sbjct: 26  PNCRPKHWRRNTAIAMFGVFLVCIPIAKLSAKLEQRPHMPVR 67


Top