BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006700
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC71666.1| hypothetical protein OsI_04129 [Oryza sativa Indi...   332   e-115
ref|NP_001167651.1| uncharacterized protein LOC100381281 [Zea ma...   332   e-115
tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays]                         332   e-115
ref|XP_002322609.1| tubulin, beta chain [Populus trichocarpa] gi...   333   e-115
sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltNa...   332   e-115

>gb|EEC71666.1| hypothetical protein OsI_04129 [Oryza sativa Indica Group]
          Length = 496

 Score =  332 bits (851), Expect(2) = e-115
 Identities = 171/204 (83%), Positives = 172/204 (84%)
 Frame = +1

Query: 31  LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATXXXXXXXXXXXXXXXXXXXXXXX 210
           LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT                       
Sbjct: 199 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEC---------- 248

Query: 211 XXXXXXXXXMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 390
                    MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL
Sbjct: 249 ---------MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 299

Query: 391 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 570
           RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRY
Sbjct: 300 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRY 359

Query: 571 LTASAMFRGKMSTKEVDEQMINVQ 642
           LTASAMFRGKMSTKEVDEQMINVQ
Sbjct: 360 LTASAMFRGKMSTKEVDEQMINVQ 383



 Score =  110 bits (275), Expect(2) = e-115
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 702 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 860
           NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA
Sbjct: 384 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 436


>ref|NP_001167651.1| uncharacterized protein LOC100381281 [Zea mays]
           gi|194702760|gb|ACF85464.1| unknown [Zea mays]
           gi|414880072|tpg|DAA57203.1| TPA: beta tubulin6 isoform
           1 [Zea mays] gi|414880073|tpg|DAA57204.1| TPA: beta
           tubulin6 isoform 2 [Zea mays]
          Length = 496

 Score =  332 bits (851), Expect(2) = e-115
 Identities = 171/204 (83%), Positives = 172/204 (84%)
 Frame = +1

Query: 31  LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATXXXXXXXXXXXXXXXXXXXXXXX 210
           LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT                       
Sbjct: 200 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEC---------- 249

Query: 211 XXXXXXXXXMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 390
                    MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL
Sbjct: 250 ---------MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 300

Query: 391 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 570
           RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRY
Sbjct: 301 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRY 360

Query: 571 LTASAMFRGKMSTKEVDEQMINVQ 642
           LTASAMFRGKMSTKEVDEQMINVQ
Sbjct: 361 LTASAMFRGKMSTKEVDEQMINVQ 384



 Score =  110 bits (275), Expect(2) = e-115
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 702 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 860
           NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA
Sbjct: 385 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 437


>tpg|DAA57202.1| TPA: beta tubulin6 [Zea mays]
          Length = 488

 Score =  332 bits (851), Expect(2) = e-115
 Identities = 171/204 (83%), Positives = 172/204 (84%)
 Frame = +1

Query: 31  LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATXXXXXXXXXXXXXXXXXXXXXXX 210
           LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT                       
Sbjct: 192 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEC---------- 241

Query: 211 XXXXXXXXXMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 390
                    MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL
Sbjct: 242 ---------MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 292

Query: 391 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 570
           RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRY
Sbjct: 293 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRY 352

Query: 571 LTASAMFRGKMSTKEVDEQMINVQ 642
           LTASAMFRGKMSTKEVDEQMINVQ
Sbjct: 353 LTASAMFRGKMSTKEVDEQMINVQ 376



 Score =  110 bits (275), Expect(2) = e-115
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 702 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 860
           NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA
Sbjct: 377 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 429


>ref|XP_002322609.1| tubulin, beta chain [Populus trichocarpa]
           gi|118486106|gb|ABK94896.1| unknown [Populus
           trichocarpa] gi|222867239|gb|EEF04370.1| tubulin, beta
           chain [Populus trichocarpa]
          Length = 450

 Score =  333 bits (854), Expect(2) = e-115
 Identities = 172/204 (84%), Positives = 172/204 (84%)
 Frame = +1

Query: 31  LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATXXXXXXXXXXXXXXXXXXXXXXX 210
           LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT                       
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEC---------- 199

Query: 211 XXXXXXXXXMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 390
                    MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL
Sbjct: 200 ---------MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250

Query: 391 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 570
           RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY
Sbjct: 251 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310

Query: 571 LTASAMFRGKMSTKEVDEQMINVQ 642
           LTASAMFRGKMSTKEVDEQMINVQ
Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQ 334



 Score =  109 bits (272), Expect(2) = e-115
 Identities = 52/53 (98%), Positives = 53/53 (100%)
 Frame = +3

Query: 702 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 860
           NKNSSYFVEWIPNNVKSSVCDIPPRGL+MASTFIGNSTSIQEMFRRVSEQFTA
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPRGLAMASTFIGNSTSIQEMFRRVSEQFTA 387


>sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|4415992|gb|AAD20179.1| beta-tubulin 2 [Eleusine
           indica]
          Length = 448

 Score =  332 bits (851), Expect(2) = e-115
 Identities = 171/204 (83%), Positives = 172/204 (84%)
 Frame = +1

Query: 31  LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATXXXXXXXXXXXXXXXXXXXXXXX 210
           LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT                       
Sbjct: 150 LLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEC---------- 199

Query: 211 XXXXXXXXXMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 390
                    MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL
Sbjct: 200 ---------MVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250

Query: 391 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 570
           RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD+KNMMCAADPRHGRY
Sbjct: 251 RKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRY 310

Query: 571 LTASAMFRGKMSTKEVDEQMINVQ 642
           LTASAMFRGKMSTKEVDEQMINVQ
Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQ 334



 Score =  110 bits (275), Expect(2) = e-115
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 702 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 860
           NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA
Sbjct: 335 NKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 387