BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006697
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...    64   1e-08
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...    64   2e-08
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...    59   5e-07
emb|CBI38030.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...    55   8e-06

>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = +1

Query: 91  QKASWQYQEVVLMKPINENGTMDI---EGKDLQEGNVVREEQKTLNNEAET-KKDEGLYV 258
           Q+    +QEVVL +P  ++   DI   + +  Q+      E+ T   E+ T  KD+G+Y+
Sbjct: 173 QRVIHPFQEVVLPRPPGQSLFKDIAIVDHRTSQDRRASNGEEATPIGESGTINKDKGVYI 232

Query: 259 GVQDNKLSHESSPQSDS-DDGLGDIWREMTLALECSKD 369
           GV++++   E S Q++S DDGLGDIW +M +ALECSKD
Sbjct: 233 GVEEDE--DEVSGQANSEDDGLGDIWNDMQMALECSKD 268


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
 Frame = +1

Query: 91  QKASWQYQEVVLMKPINENGTMDIEGKDLQEGNVVR----EEQKTLNNEAETKKDEGLYV 258
           Q+    +QEVVL +P  ++   DI   D +     R    EE   +       KD+G+Y+
Sbjct: 173 QRVIHPFQEVVLPRPPGQSLFKDIAIVDHRTSRDRRASNGEEATPIGESGTINKDKGVYI 232

Query: 259 GVQDNKLSHESSPQSDS-DDGLGDIWREMTLALECSKD 369
           GV++++   E S Q++S DDGLGDIW +M +ALECSKD
Sbjct: 233 GVEEDE--DEVSGQANSEDDGLGDIWNDMQMALECSKD 268


>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = +1

Query: 82  DANQKASWQYQEVVLMKPINENGTMDIEGKD--LQEGNVVREEQKTLNNEAETKKDEGLY 255
           D ++K+   + EVVL + +  +  + + G    L E N ++ E    +    T+ ++G+Y
Sbjct: 162 DRDKKSVIPFHEVVLPRKVAPSPALKVIGYHTYLGESNDLKIEINMADKGNNTRSNKGVY 221

Query: 256 VGVQDNKLSHESSPQSDSDDGLGDIWREMTLALECSKDAT 375
           VG Q      E       DDGL DIW+EM++A+ECSKD +
Sbjct: 222 VGAQ----GEEEDKADTEDDGLQDIWKEMSMAIECSKDVS 257


>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 22/112 (19%)
 Frame = +1

Query: 100 SWQYQEVVLMKP-----INENGTMDIEGK---DLQEGNV-----VREE--------QKTL 216
           S+ YQEVVL KP      N     D  G     ++EG++     +R++        +K+L
Sbjct: 189 SFSYQEVVLRKPSVGLLANNPVVRDYVGSIAPKVEEGSLMGATEIRKDKDVYIGVGEKSL 248

Query: 217 NNEAETKKDEGLYVGVQDNKLSHESSPQSDS-DDGLGDIWREMTLALECSKD 369
               E KK +G YVGV+D+  ++E + ++ + DDGL D+W+E  LAL+ SKD
Sbjct: 249 VANLEMKKVQGEYVGVEDDMETNEGNLRAKTEDDGLADMWQEFDLALQSSKD 300


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 903

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 22/112 (19%)
 Frame = +1

Query: 100 SWQYQEVVLMKP-----INENGTMDIEGK---DLQEGNV-----VREE--------QKTL 216
           S+ YQEVVL KP      N     D  G     ++EG++     +R++        +K+L
Sbjct: 147 SFSYQEVVLRKPSVGLLANNPVVRDYVGSIAPKVEEGSLMGATEIRKDKDVYIGVGEKSL 206

Query: 217 NNEAETKKDEGLYVGVQDNKLSHESSPQSDS-DDGLGDIWREMTLALECSKD 369
               E KK +G YVGV+D+  ++E + ++ + DDGL D+W+E  LAL+ SKD
Sbjct: 207 VANLEMKKVQGEYVGVEDDMETNEGNLRAKTEDDGLADMWQEFDLALQSSKD 258