BLASTX nr result

ID: Coptis23_contig00006696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006696
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002527720.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|222849846|gb|EEE87393.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
 Frame = +3

Query: 9   EDDDELRTSTSLDHTILVSKQCPTAPRKQKSPPTKKRKASSNVCY----SRRELIFPP-L 173
           +DDD  +T TSLD  I V  QCP APRK KS P+ KRK+          +  E +FPP L
Sbjct: 83  DDDDGFKTPTSLDRKIPVIFQCPPAPRKPKSLPSAKRKSPQRRVLLDLSNEIESLFPPAL 142

Query: 174 VPDLGRKIKKSRVSDST 224
             DLG KIKK R  + T
Sbjct: 143 AGDLGGKIKKVRQGNDT 159


>ref|XP_002527720.1| conserved hypothetical protein [Ricinus communis]
           gi|223532861|gb|EEF34633.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
 Frame = +3

Query: 9   EDDDELRTSTSLDHTILVSKQCPTAPRKQKSPPTKKRKA----------SSNVCYSRREL 158
           ED+D  +T TSLDH I V+KQCP AP K K PP+ KRKA            ++C     L
Sbjct: 96  EDNDGFKTPTSLDHKIPVTKQCPPAPGKPKIPPSAKRKARHTNVRRRNLQLDLCQELESL 155

Query: 159 IFPPLVPDLGRKIKKSRVSD 218
               ++ D   K+KK+R  D
Sbjct: 156 FPRTILDDFYNKMKKARRDD 175


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