BLASTX nr result

ID: Coptis23_contig00006690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006690
         (1519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284400.1| PREDICTED: transcription factor MYB59-like [...   192   2e-46
tpg|DAA47063.1| TPA: putative MYB DNA-binding domain superfamily...   191   3e-46
ref|XP_002313452.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-45
gb|AET98472.1| MYB transcription factor MYB14 [Saccharum hybrid ...   189   2e-45
gb|ACR37639.1| unknown [Zea mays] gi|414868507|tpg|DAA47064.1| T...   189   2e-45

>ref|XP_002284400.1| PREDICTED: transcription factor MYB59-like [Vitis vinifera]
          Length = 258

 Score =  192 bits (488), Expect = 2e-46
 Identities = 106/196 (54%), Positives = 112/196 (57%)
 Frame = -3

Query: 1415 VKMVKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRW 1236
            +KMV+EE RKGPWTE ED QLV +V LFG+RRWDFIAKVSG                   
Sbjct: 1    MKMVQEEIRKGPWTEKEDFQLVCFVGLFGDRRWDFIAKVSG------------------- 41

Query: 1235 G*RS*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPQEERLVLELHSRWGNRFE 1056
                           LNRTGKSCRLRWVNYLHPGLKRG+MTP EERLVLELHS+WGN   
Sbjct: 42   ---------------LNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELHSQWGN--- 83

Query: 1055 *CDYXXXXXXXXXXXXXXXXXXITYASIFFFAXXXXXXTSDRWSRIARKLPGRTDNEIKN 876
                                                     RWSRIARKLPGRTDNEIKN
Sbjct: 84   -----------------------------------------RWSRIARKLPGRTDNEIKN 102

Query: 875  YWRTHMRKKAQERKRA 828
            YWRTHMRKKAQERKRA
Sbjct: 103  YWRTHMRKKAQERKRA 118



 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 4/56 (7%)
 Frame = -3

Query: 566 VYESCIDEGNSFSYAP--LTSPLWDYCFDSLWRMDEEENKMLLPMSD--LSAYNYG 411
           VY+   +EG  F+  P  + SP+WDYC DSLWRMDEEE+KM LPMSD  +S+Y +G
Sbjct: 197 VYDGYKEEGCDFACPPNPMASPVWDYCPDSLWRMDEEESKMFLPMSDQFISSYEHG 252


>tpg|DAA47063.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 245

 Score =  191 bits (486), Expect = 3e-46
 Identities = 105/192 (54%), Positives = 110/192 (57%)
 Frame = -3

Query: 1406 VKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG*R 1227
            V+EETRKGPWTE EDLQLV  V LFGERRWDFIAKVSG                      
Sbjct: 4    VREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLR-------------------- 43

Query: 1226 S*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPQEERLVLELHSRWGNRFE*CD 1047
                       GLNRTGKSCRLRWVNYLHPGLKRGRM+P EERL+LELH+RWGN      
Sbjct: 44   -----------GLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGN------ 86

Query: 1046 YXXXXXXXXXXXXXXXXXXITYASIFFFAXXXXXXTSDRWSRIARKLPGRTDNEIKNYWR 867
                                                  RWSRIAR+LPGRTDNEIKNYWR
Sbjct: 87   --------------------------------------RWSRIARRLPGRTDNEIKNYWR 108

Query: 866  THMRKKAQERKR 831
            THMRKKAQERKR
Sbjct: 109  THMRKKAQERKR 120


>ref|XP_002313452.1| predicted protein [Populus trichocarpa] gi|222849860|gb|EEE87407.1|
            predicted protein [Populus trichocarpa]
          Length = 228

 Score =  189 bits (480), Expect = 2e-45
 Identities = 107/225 (47%), Positives = 121/225 (53%)
 Frame = -3

Query: 1409 MVKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG* 1230
            M+++ETRKGPWTE ED+ L+ +VNLFG+RRWDFIAKVSG                     
Sbjct: 1    MMQDETRKGPWTEQEDILLINFVNLFGDRRWDFIAKVSG--------------------- 39

Query: 1229 RS*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPQEERLVLELHSRWGNRFE*C 1050
                         LNRTGKSCRLRWVNYLHPGLKRG+MTPQEERLVLELH+RWGN     
Sbjct: 40   -------------LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHARWGN----- 81

Query: 1049 DYXXXXXXXXXXXXXXXXXXITYASIFFFAXXXXXXTSDRWSRIARKLPGRTDNEIKNYW 870
                                                   RWSRIARKLPGRTDNEIKNYW
Sbjct: 82   ---------------------------------------RWSRIARKLPGRTDNEIKNYW 102

Query: 869  RTHMRKKAQERKRAXXXXXXXXXXXSPNNDIPIDSSAKAKTEEGT 735
            RTH RKKAQERK             S +N   ++SS+   T E +
Sbjct: 103  RTHTRKKAQERKSVVSPSLSSSNCSSSSNITTVNSSSPPGTGEAS 147


>gb|AET98472.1| MYB transcription factor MYB14 [Saccharum hybrid cultivar Co 740]
          Length = 220

 Score =  189 bits (479), Expect = 2e-45
 Identities = 104/192 (54%), Positives = 109/192 (56%)
 Frame = -3

Query: 1406 VKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG*R 1227
            V+EETRKGPWTE EDLQLV  V LFGERRWDFIAKVSG                      
Sbjct: 4    VREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG---------------------- 41

Query: 1226 S*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPQEERLVLELHSRWGNRFE*CD 1047
                        LNRTGKSCRLRWVNYLHPGLKRGRM+P EERL+LELH+RWGN      
Sbjct: 42   ------------LNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGN------ 83

Query: 1046 YXXXXXXXXXXXXXXXXXXITYASIFFFAXXXXXXTSDRWSRIARKLPGRTDNEIKNYWR 867
                                                  RWSRIAR+LPGRTDNEIKNYWR
Sbjct: 84   --------------------------------------RWSRIARRLPGRTDNEIKNYWR 105

Query: 866  THMRKKAQERKR 831
            THMRKKAQERKR
Sbjct: 106  THMRKKAQERKR 117


>gb|ACR37639.1| unknown [Zea mays] gi|414868507|tpg|DAA47064.1| TPA: putative MYB
            DNA-binding domain superfamily protein isoform 1 [Zea
            mays] gi|414868508|tpg|DAA47065.1| TPA: putative MYB
            DNA-binding domain superfamily protein isoform 2 [Zea
            mays]
          Length = 242

 Score =  189 bits (479), Expect = 2e-45
 Identities = 104/192 (54%), Positives = 109/192 (56%)
 Frame = -3

Query: 1406 VKEETRKGPWTEHEDLQLVYYVNLFGERRWDFIAKVSGSEVEGTHVLRTR*AYLGRWG*R 1227
            V+EETRKGPWTE EDLQLV  V LFGERRWDFIAKVSG                      
Sbjct: 4    VREETRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSG---------------------- 41

Query: 1226 S*YL*PPGFVVGLNRTGKSCRLRWVNYLHPGLKRGRMTPQEERLVLELHSRWGNRFE*CD 1047
                        LNRTGKSCRLRWVNYLHPGLKRGRM+P EERL+LELH+RWGN      
Sbjct: 42   ------------LNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGN------ 83

Query: 1046 YXXXXXXXXXXXXXXXXXXITYASIFFFAXXXXXXTSDRWSRIARKLPGRTDNEIKNYWR 867
                                                  RWSRIAR+LPGRTDNEIKNYWR
Sbjct: 84   --------------------------------------RWSRIARRLPGRTDNEIKNYWR 105

Query: 866  THMRKKAQERKR 831
            THMRKKAQERKR
Sbjct: 106  THMRKKAQERKR 117


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