BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006688
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   258   3e-67
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   252   2e-65
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              252   2e-65
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   250   7e-65
ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi...   246   1e-63

>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  258 bits (659), Expect = 3e-67
 Identities = 125/140 (89%), Positives = 130/140 (92%)
 Frame = -1

Query: 482  KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 303
            KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD
Sbjct: 581  KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 640

Query: 302  GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLKKVIQQEQIENDSAQGNTLSTEDLRDLFT 123
            GQKKRVYIYRFLS GTIEEKVYQRQMSKEGL+KVIQQEQ ++  AQGN LSTE+LRDLFT
Sbjct: 641  GQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLVAQGNLLSTENLRDLFT 700

Query: 122  FHENSRSEIHEKMNCIRCTT 63
            FHEN +SEIHE M C RC T
Sbjct: 701  FHENIKSEIHENMQCSRCQT 720


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  252 bits (644), Expect = 2e-65
 Identities = 125/147 (85%), Positives = 132/147 (89%)
 Frame = -1

Query: 482  KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 303
            KRQKLVN F+DP KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD
Sbjct: 591  KRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 650

Query: 302  GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLKKVIQQEQIENDSAQGNTLSTEDLRDLFT 123
            GQKKRVYIYRFLSTGTIEEKV+QRQMSKEGL+KVIQQEQ ++   QGN LSTEDLRDLF+
Sbjct: 651  GQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFS 710

Query: 122  FHENSRSEIHEKMNCIRCTTCNLEVES 42
            FHEN RSEIHEKMNC RC   +   ES
Sbjct: 711  FHENVRSEIHEKMNCNRCQNYDERPES 737


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  252 bits (644), Expect = 2e-65
 Identities = 125/147 (85%), Positives = 132/147 (89%)
 Frame = -1

Query: 482  KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 303
            KRQKLVN F+DP KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD
Sbjct: 769  KRQKLVNRFSDPLKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 828

Query: 302  GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLKKVIQQEQIENDSAQGNTLSTEDLRDLFT 123
            GQKKRVYIYRFLSTGTIEEKV+QRQMSKEGL+KVIQQEQ ++   QGN LSTEDLRDLF+
Sbjct: 829  GQKKRVYIYRFLSTGTIEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFS 888

Query: 122  FHENSRSEIHEKMNCIRCTTCNLEVES 42
            FHEN RSEIHEKMNC RC   +   ES
Sbjct: 889  FHENVRSEIHEKMNCNRCQNYDERPES 915


>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
            sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
            repair and recombination protein RAD54-like [Cucumis
            sativus]
          Length = 928

 Score =  250 bits (639), Expect = 7e-65
 Identities = 124/149 (83%), Positives = 130/149 (87%)
 Frame = -1

Query: 482  KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 303
            KRQKLVN FND SKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD
Sbjct: 590  KRQKLVNRFNDLSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 649

Query: 302  GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLKKVIQQEQIENDSAQGNTLSTEDLRDLFT 123
            GQKKRV+IYRFLSTGTIEEKVYQRQMSKEGL+KVIQQE   N + Q N LS+EDLRDLF+
Sbjct: 650  GQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFS 709

Query: 122  FHENSRSEIHEKMNCIRCTTCNLEVESSD 36
            FH+N RSEIHEKMNC RC  C    E  D
Sbjct: 710  FHDNVRSEIHEKMNCSRCQNCYGRPEDMD 738


>ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi|332642688|gb|AEE76209.1|
            Rad54-like protein [Arabidopsis thaliana]
          Length = 908

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/138 (85%), Positives = 126/138 (91%)
 Frame = -1

Query: 482  KRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRD 303
            KRQKLVN  NDP+KDEF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRD
Sbjct: 587  KRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRD 646

Query: 302  GQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLKKVIQQEQIENDSAQGNTLSTEDLRDLFT 123
            GQKKRVY+YRFLSTGTIEEKVYQRQMSKEGL+KVIQ EQ +N + QGN LSTEDLRDLF+
Sbjct: 647  GQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFS 706

Query: 122  FHENSRSEIHEKMNCIRC 69
            FH + RSEIHEKM+C RC
Sbjct: 707  FHGDVRSEIHEKMSCSRC 724