BLASTX nr result
ID: Coptis23_contig00006684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00006684
(1500 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera] 268 3e-69
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 267 5e-69
emb|CBI29360.3| unnamed protein product [Vitis vinifera] 267 5e-69
ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|2... 266 8e-69
ref|XP_002307525.1| predicted protein [Populus trichocarpa] gi|2... 266 1e-68
>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 268 bits (685), Expect = 3e-69
Identities = 167/392 (42%), Positives = 227/392 (57%), Gaps = 13/392 (3%)
Frame = +3
Query: 3 VKRLPPMINTELLLREIFAEYGTIISCRV-----WNSKGYGFVHFEEEQAAMSALA--HG 161
+K L P I+ + LL + FA +GT++SC++ SKGYGFV FE+E+AA +A+ +G
Sbjct: 131 IKNLDPSIDNKALL-DTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG 189
Query: 162 ALVNGVEISVDLFISRQEREELEECRKHNTIYIENMSKTGYPRSMWNYCLYYGEIVDSCY 341
L+N ++ V LF+ QER K +Y++N+S+T + N YG I +
Sbjct: 190 MLINDKQVYVGLFVRHQERNXGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVV 249
Query: 342 PKEGT---TDYGFVVFKKHEDAARAIQCLNGRAFGD-QLWYVAWAWSKSKXXXXXXXXXX 509
++ + +GFV F+ + AA A++ LNG F D ++WYV A KS+
Sbjct: 250 MRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFE 309
Query: 510 XXXXXXXXXXXXXXXXXXXXXXXXLYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQG 689
LYLKN DDS++D++L LFSEFGTITSCKVMLD QG
Sbjct: 310 QERKNKFEKFKGXN----------LYLKNLDDSVNDEKLXELFSEFGTITSCKVMLDPQG 359
Query: 690 QSRGFGFVAFSTPENATKAVKEMNGKMIGKKPLYVAVAQSKEERKAIVEACPAQVQASG- 866
S+G GFVAF TPE AT+A+ MNGKMIG+KPLYVAVAQ KEERKA ++A AQ+++ G
Sbjct: 360 LSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGA 419
Query: 867 VAHVSSGLHLSSPLASTPGPQQPYFGQGYAGLVRPQSAGCGY-EQFDFGNRPAMALRYTV 1043
+ + SG+ A PQQ YFGQG GL+ Q AG G+ +Q G RP +A + +
Sbjct: 420 MTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIM 479
Query: 1044 PDHLRSQGQPELPIGVRLSGTPQQQLHQACPA 1139
P L+ QGQP +GVR G QQ HQ PA
Sbjct: 480 PYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPA 511
Score = 80.9 bits (198), Expect = 8e-13
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +3
Query: 582 LYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQSRGFGFVAFSTPENATKAVKEMN 761
+++KN D SID+K L F+ FGT+ SCK+ LD+ GQS+G+GFV F E A A+K +N
Sbjct: 129 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLN 188
Query: 762 GKMIGKKPLYVAVAQSKEER 821
G +I K +YV + +ER
Sbjct: 189 GMLINDKQVYVGLFVRHQER 208
Score = 63.9 bits (154), Expect = 1e-07
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +1
Query: 1279 APTLGPQPPYFRQGYYDLVPLEPAGCGYEQQFVFGNLPAMALKYMMPDHLWSEWQPGLPV 1458
AP L PQ YF QG L+P +PAG G++QQ + G P +A ++MP L + QPG +
Sbjct: 434 APRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRM 493
Query: 1459 GVNRGGIPQ 1485
GV RGG Q
Sbjct: 494 GVRRGGNSQ 502
>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 267 bits (683), Expect = 5e-69
Identities = 165/391 (42%), Positives = 225/391 (57%), Gaps = 13/391 (3%)
Frame = +3
Query: 3 VKRLPPMINTELLLREIFAEYGTIISCRV-----WNSKGYGFVHFEEEQAAMSALA--HG 161
+K L P I+ + LL + FA +GT++SC++ SKGYGFV FE+E+AA +A+ +G
Sbjct: 565 IKNLDPSIDNKALL-DTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG 623
Query: 162 ALVNGVEISVDLFISRQEREELEECRKHNTIYIENMSKTGYPRSMWNYCLYYGEIVDSCY 341
L+N ++ V LF+ QER K +Y++N+S+T + N YG I +
Sbjct: 624 MLINDKQVYVGLFVRHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVV 683
Query: 342 PKEGT---TDYGFVVFKKHEDAARAIQCLNGRAFGD-QLWYVAWAWSKSKXXXXXXXXXX 509
++ + +GFV F+ + AA A++ LNG F D ++WYV A KS+
Sbjct: 684 MRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFE 743
Query: 510 XXXXXXXXXXXXXXXXXXXXXXXXLYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQG 689
LYLKN DDS++D++L LFSEFGTITSCKVMLD QG
Sbjct: 744 QERKNKFEKFKGTN----------LYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQG 793
Query: 690 QSRGFGFVAFSTPENATKAVKEMNGKMIGKKPLYVAVAQSKEERKAIVEACPAQVQASG- 866
S+G GFVAF TPE AT+A+ MNGKMIG+KPLYVAVAQ KEERKA ++A AQ+++ G
Sbjct: 794 LSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGA 853
Query: 867 VAHVSSGLHLSSPLASTPGPQQPYFGQGYAGLVRPQSAGCGY-EQFDFGNRPAMALRYTV 1043
+ + SG+ A PQQ YFGQG GL+ Q AG G+ +Q G RP +A + +
Sbjct: 854 MTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIM 913
Query: 1044 PDHLRSQGQPELPIGVRLSGTPQQQLHQACP 1136
P L+ QGQP +GVR G QQ HQ P
Sbjct: 914 PYQLQRQGQPGQRMGVRRGGNSQQMQHQQQP 944
Score = 80.9 bits (198), Expect = 8e-13
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +3
Query: 582 LYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQSRGFGFVAFSTPENATKAVKEMN 761
+++KN D SID+K L F+ FGT+ SCK+ LD+ GQS+G+GFV F E A A+K +N
Sbjct: 563 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLN 622
Query: 762 GKMIGKKPLYVAVAQSKEER 821
G +I K +YV + +ER
Sbjct: 623 GMLINDKQVYVGLFVRHQER 642
Score = 63.9 bits (154), Expect = 1e-07
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +1
Query: 1279 APTLGPQPPYFRQGYYDLVPLEPAGCGYEQQFVFGNLPAMALKYMMPDHLWSEWQPGLPV 1458
AP L PQ YF QG L+P +PAG G++QQ + G P +A ++MP L + QPG +
Sbjct: 868 APRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRM 927
Query: 1459 GVNRGGIPQ 1485
GV RGG Q
Sbjct: 928 GVRRGGNSQ 936
>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 267 bits (683), Expect = 5e-69
Identities = 165/391 (42%), Positives = 225/391 (57%), Gaps = 13/391 (3%)
Frame = +3
Query: 3 VKRLPPMINTELLLREIFAEYGTIISCRV-----WNSKGYGFVHFEEEQAAMSALA--HG 161
+K L P I+ + LL + FA +GT++SC++ SKGYGFV FE+E+AA +A+ +G
Sbjct: 105 IKNLDPSIDNKALL-DTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG 163
Query: 162 ALVNGVEISVDLFISRQEREELEECRKHNTIYIENMSKTGYPRSMWNYCLYYGEIVDSCY 341
L+N ++ V LF+ QER K +Y++N+S+T + N YG I +
Sbjct: 164 MLINDKQVYVGLFVRHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVV 223
Query: 342 PKEGT---TDYGFVVFKKHEDAARAIQCLNGRAFGD-QLWYVAWAWSKSKXXXXXXXXXX 509
++ + +GFV F+ + AA A++ LNG F D ++WYV A KS+
Sbjct: 224 MRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFE 283
Query: 510 XXXXXXXXXXXXXXXXXXXXXXXXLYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQG 689
LYLKN DDS++D++L LFSEFGTITSCKVMLD QG
Sbjct: 284 QERKNKFEKFKGTN----------LYLKNLDDSVNDEKLKELFSEFGTITSCKVMLDPQG 333
Query: 690 QSRGFGFVAFSTPENATKAVKEMNGKMIGKKPLYVAVAQSKEERKAIVEACPAQVQASG- 866
S+G GFVAF TPE AT+A+ MNGKMIG+KPLYVAVAQ KEERKA ++A AQ+++ G
Sbjct: 334 LSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEERKARLQAQFAQIRSPGA 393
Query: 867 VAHVSSGLHLSSPLASTPGPQQPYFGQGYAGLVRPQSAGCGY-EQFDFGNRPAMALRYTV 1043
+ + SG+ A PQQ YFGQG GL+ Q AG G+ +Q G RP +A + +
Sbjct: 394 MTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIM 453
Query: 1044 PDHLRSQGQPELPIGVRLSGTPQQQLHQACP 1136
P L+ QGQP +GVR G QQ HQ P
Sbjct: 454 PYQLQRQGQPGQRMGVRRGGNSQQMQHQQQP 484
Score = 80.9 bits (198), Expect = 8e-13
Identities = 37/80 (46%), Positives = 53/80 (66%)
Frame = +3
Query: 582 LYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQSRGFGFVAFSTPENATKAVKEMN 761
+++KN D SID+K L F+ FGT+ SCK+ LD+ GQS+G+GFV F E A A+K +N
Sbjct: 103 VFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLN 162
Query: 762 GKMIGKKPLYVAVAQSKEER 821
G +I K +YV + +ER
Sbjct: 163 GMLINDKQVYVGLFVRHQER 182
Score = 63.9 bits (154), Expect = 1e-07
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +1
Query: 1279 APTLGPQPPYFRQGYYDLVPLEPAGCGYEQQFVFGNLPAMALKYMMPDHLWSEWQPGLPV 1458
AP L PQ YF QG L+P +PAG G++QQ + G P +A ++MP L + QPG +
Sbjct: 408 APRLAPQQLYFGQGTPGLIPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRM 467
Query: 1459 GVNRGGIPQ 1485
GV RGG Q
Sbjct: 468 GVRRGGNSQ 476
>ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|222856975|gb|EEE94522.1|
predicted protein [Populus trichocarpa]
Length = 649
Score = 266 bits (681), Expect = 8e-69
Identities = 160/382 (41%), Positives = 219/382 (57%), Gaps = 11/382 (2%)
Frame = +3
Query: 3 VKRLPPMINTELLLREIFAEYGTIISCRV-----WNSKGYGFVHFEEEQAAMSAL--AHG 161
+K L I+ + L +E FA +G+++SC+V SKGYGFV FE E+AA SA+ +G
Sbjct: 125 IKNLDTSIDNKAL-QETFASFGSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNG 183
Query: 162 ALVNGVEISVDLFISRQEREELEECRKHNTIYIENMSKTGYPRSMWNYCLYYGEIVDSCY 341
L+N E+ V F+ QER E K +Y++N+S+T + + YG I +
Sbjct: 184 MLINDKEVFVGRFVRHQERIEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGAITSAIV 243
Query: 342 PKEGT---TDYGFVVFKKHEDAARAIQCLNGRAFGDQLWYVAWAWSKSKXXXXXXXXXXX 512
K+ + +GFV F+ + AA A++ LNG F D++WYV A K +
Sbjct: 244 MKDQSGKSKGFGFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQ 303
Query: 513 XXXXXXXXXXXXXXXXXXXXXXXLYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQ 692
LYLKN DD IDD++L LFSEFG+ITSCKVMLD QG
Sbjct: 304 ERNSRYEKLKAAN----------LYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGL 353
Query: 693 SRGFGFVAFSTPENATKAVKEMNGKMIGKKPLYVAVAQSKEERKAIVEACPAQVQASGVA 872
S+G GFVAFSTPE A++A+ MNGKMIGKKPLYVAVAQ +EERKA ++A Q+QA G++
Sbjct: 354 SKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAVAQRREERKARLQAHFTQIQAPGLS 413
Query: 873 HVSSGLHLSSPLASTPGPQQPYFGQGYAGLVRPQSAGCGYEQFDF-GNRPAMALRYTVPD 1049
+ SGL P A PQQ +FGQG AG++ PQ AG G++Q G R + + +P
Sbjct: 414 PMPSGLPGYHPGAPRLAPQQLFFGQGTAGMMPPQPAGYGFQQQLLPGMRAGVGPNFVMPY 473
Query: 1050 HLRSQGQPELPIGVRLSGTPQQ 1115
++ QGQ +G+R G QQ
Sbjct: 474 QMQRQGQQGQRMGIRRGGNHQQ 495
Score = 75.9 bits (185), Expect = 3e-11
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +3
Query: 582 LYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQSRGFGFVAFSTPENATKAVKEMN 761
+++KN D SID+K L F+ FG++ SCKV +D+ GQS+G+GFV F E A A+ +N
Sbjct: 123 VFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLN 182
Query: 762 GKMIGKKPLYVAVAQSKEER 821
G +I K ++V +ER
Sbjct: 183 GMLINDKEVFVGRFVRHQER 202
>ref|XP_002307525.1| predicted protein [Populus trichocarpa] gi|222856974|gb|EEE94521.1|
predicted protein [Populus trichocarpa]
Length = 614
Score = 266 bits (680), Expect = 1e-68
Identities = 160/382 (41%), Positives = 218/382 (57%), Gaps = 11/382 (2%)
Frame = +3
Query: 3 VKRLPPMINTELLLREIFAEYGTIISCRV-----WNSKGYGFVHFEEEQAAMSAL--AHG 161
+K L I+ + L +E FA +G ++SC+V SKGYGFV FE E+AA SA+ +G
Sbjct: 115 IKNLDTSIDNKAL-QETFASFGPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNG 173
Query: 162 ALVNGVEISVDLFISRQEREELEECRKHNTIYIENMSKTGYPRSMWNYCLYYGEIVDSCY 341
L+N E+ V F+ QER E K +Y++N+S+T + + YG I +
Sbjct: 174 MLINDKEVFVGRFVRHQERIEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGSITSAIV 233
Query: 342 PKEGT---TDYGFVVFKKHEDAARAIQCLNGRAFGDQLWYVAWAWSKSKXXXXXXXXXXX 512
K+ + +GFV F+ + AA A++ LNG F D++WYV A K +
Sbjct: 234 MKDQSGKSKGFGFVNFQSPDSAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQ 293
Query: 513 XXXXXXXXXXXXXXXXXXXXXXXLYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQ 692
LYLKN DD IDD++L LFSEFG+ITSCKVMLD QG
Sbjct: 294 ERNSRYEKLKAAN----------LYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGL 343
Query: 693 SRGFGFVAFSTPENATKAVKEMNGKMIGKKPLYVAVAQSKEERKAIVEACPAQVQASGVA 872
S+G GFVAFSTPE A++A+ MNGKMIGKKPLYVAVAQ +EERKA ++A Q+QA G++
Sbjct: 344 SKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAVAQRREERKARLQAHFTQIQAPGLS 403
Query: 873 HVSSGLHLSSPLASTPGPQQPYFGQGYAGLVRPQSAGCGYEQFDF-GNRPAMALRYTVPD 1049
+ SGL P A PQQ +FGQG AG++ PQ AG G++Q G R + + +P
Sbjct: 404 PMPSGLPGYHPGAPRLAPQQLFFGQGTAGMMPPQPAGYGFQQQLLPGMRAGVGPNFVMPY 463
Query: 1050 HLRSQGQPELPIGVRLSGTPQQ 1115
++ QGQ +G+R G QQ
Sbjct: 464 QMQRQGQQGQRMGIRRGGNHQQ 485
Score = 75.1 bits (183), Expect = 4e-11
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +3
Query: 582 LYLKNFDDSIDDKRLNYLFSEFGTITSCKVMLDSQGQSRGFGFVAFSTPENATKAVKEMN 761
+++KN D SID+K L F+ FG + SCKV +D+ GQS+G+GFV F E A A+ +N
Sbjct: 113 VFIKNLDTSIDNKALQETFASFGPVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLN 172
Query: 762 GKMIGKKPLYVAVAQSKEER 821
G +I K ++V +ER
Sbjct: 173 GMLINDKEVFVGRFVRHQER 192