BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006681
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...   110   6e-43
gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indi...   106   1e-42
ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group] g...   106   1e-42
ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824...   104   5e-42
gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcr...   103   1e-40

>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  110 bits (275), Expect(2) = 6e-43
 Identities = 58/87 (66%), Positives = 60/87 (68%)
 Frame = +1

Query: 79  MSHFGRTGPPDIRDTYSLXXXXXXXXXXXXXXXXXXXXXXDTYSLLVLNITFRTTADDLF 258
           MSHFGR+GPPDIRDTYSL                           LVLNITFRTTADDLF
Sbjct: 1   MSHFGRSGPPDIRDTYSL---------------------------LVLNITFRTTADDLF 33

Query: 259 PLFDKYGKVVDIFIPRDRRTGDSRGFA 339
           PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 34  PLFDKYGKVVDVFIPRDRRTGDSRGFA 60



 Score = 90.1 bits (222), Expect(2) = 6e-43
 Identities = 42/49 (85%), Positives = 46/49 (93%)
 Frame = +3

Query: 420 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIET 566
           FVRYKY +EAQKAVE+LDGRNVDGR+IMVQFAKYGPNAE I KGR+IET
Sbjct: 61  FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRIIET 109


>gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
           gi|222640763|gb|EEE68895.1| hypothetical protein
           OsJ_27729 [Oryza sativa Japonica Group]
          Length = 298

 Score =  106 bits (264), Expect(2) = 1e-42
 Identities = 55/87 (63%), Positives = 60/87 (68%)
 Frame = +1

Query: 79  MSHFGRTGPPDIRDTYSLXXXXXXXXXXXXXXXXXXXXXXDTYSLLVLNITFRTTADDLF 258
           MSHFGR+GPPDIRDT+SL                           LVLNI+FRTTADDLF
Sbjct: 1   MSHFGRSGPPDIRDTFSL---------------------------LVLNISFRTTADDLF 33

Query: 259 PLFDKYGKVVDIFIPRDRRTGDSRGFA 339
           PLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 34  PLFDRYGKVVDVFIPRDRRTGDSRGFA 60



 Score = 93.2 bits (230), Expect(2) = 1e-42
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = +3

Query: 420 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIE 563
           FVRYKY EEAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI+KGR+IE
Sbjct: 61  FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIE 108


>ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
           gi|42408182|dbj|BAD09319.1| putative splicing factor,
           arginine/serine-rich [Oryza sativa Japonica Group]
           gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa
           Japonica Group] gi|215693774|dbj|BAG88973.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215737273|dbj|BAG96202.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 289

 Score =  106 bits (264), Expect(2) = 1e-42
 Identities = 55/87 (63%), Positives = 60/87 (68%)
 Frame = +1

Query: 79  MSHFGRTGPPDIRDTYSLXXXXXXXXXXXXXXXXXXXXXXDTYSLLVLNITFRTTADDLF 258
           MSHFGR+GPPDIRDT+SL                           LVLNI+FRTTADDLF
Sbjct: 1   MSHFGRSGPPDIRDTFSL---------------------------LVLNISFRTTADDLF 33

Query: 259 PLFDKYGKVVDIFIPRDRRTGDSRGFA 339
           PLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 34  PLFDRYGKVVDVFIPRDRRTGDSRGFA 60



 Score = 93.2 bits (230), Expect(2) = 1e-42
 Identities = 42/48 (87%), Positives = 47/48 (97%)
 Frame = +3

Query: 420 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIE 563
           FVRYKY EEAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI+KGR+IE
Sbjct: 61  FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIE 108


>ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
           distachyon]
          Length = 283

 Score =  104 bits (260), Expect(2) = 5e-42
 Identities = 54/87 (62%), Positives = 59/87 (67%)
 Frame = +1

Query: 79  MSHFGRTGPPDIRDTYSLXXXXXXXXXXXXXXXXXXXXXXDTYSLLVLNITFRTTADDLF 258
           MSHFGR GPPDIRDT+SL                           LVLNI+FRTTADDL+
Sbjct: 1   MSHFGRAGPPDIRDTFSL---------------------------LVLNISFRTTADDLY 33

Query: 259 PLFDKYGKVVDIFIPRDRRTGDSRGFA 339
           PLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 34  PLFDRYGKVVDVFIPRDRRTGDSRGFA 60



 Score = 92.8 bits (229), Expect(2) = 5e-42
 Identities = 43/48 (89%), Positives = 47/48 (97%)
 Frame = +3

Query: 420 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIE 563
           FVRYKY +EAQKAV+RLDGRNVDGR+IMVQFAKYGPNAEPI+KGRVIE
Sbjct: 61  FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRVIE 108


>gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
           bicolor]
          Length = 273

 Score =  103 bits (257), Expect(2) = 1e-40
 Identities = 53/87 (60%), Positives = 60/87 (68%)
 Frame = +1

Query: 79  MSHFGRTGPPDIRDTYSLXXXXXXXXXXXXXXXXXXXXXXDTYSLLVLNITFRTTADDLF 258
           MSHFGR+GPPDIRDT+SL                           LVLNI+FRTTADDL+
Sbjct: 1   MSHFGRSGPPDIRDTFSL---------------------------LVLNISFRTTADDLY 33

Query: 259 PLFDKYGKVVDIFIPRDRRTGDSRGFA 339
           PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 34  PLFERYGKVVDVFIPRDRRTGDSRGFA 60



 Score = 89.4 bits (220), Expect(2) = 1e-40
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +3

Query: 420 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIE 563
           FVRYKY +EAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI+KGRV E
Sbjct: 61  FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRVKE 108