BLASTX nr result

ID: Coptis23_contig00006680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006680
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16268.3| unnamed protein product [Vitis vinifera]              469   e-130
ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   469   e-130
ref|XP_004147268.1| PREDICTED: uncharacterized protein LOC101214...   456   e-126
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        454   e-125
ref|XP_002323444.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123

>emb|CBI16268.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  469 bits (1208), Expect = e-130
 Identities = 230/344 (66%), Positives = 277/344 (80%)
 Frame = +3

Query: 3    KPYVITLADKNAPNEEVWDLIEDMCLSTSASAVPVISDSDGTDSNPYSLDALAVFMFRVF 182
            KP  I LADKNAPNEEVW  IEDMC ST ASAVPV+ DS+GTDSNP+SLDALAVFMFRV 
Sbjct: 670  KPCSIILADKNAPNEEVWRQIEDMCRSTRASAVPVVPDSEGTDSNPFSLDALAVFMFRVL 729

Query: 183  QRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRSPLP 362
            QRVNHPGNLDK   +AGYVLLMFYHL+EGK+R EFESEL ERFG++VKMPL+K+DRS +P
Sbjct: 730  QRVNHPGNLDKASPNAGYVLLMFYHLYEGKSRKEFESELIERFGSLVKMPLLKSDRSTMP 789

Query: 363  SPLKCALEKGINLYKLHTNKHGKLGPAKGSYSKEWVNWEKQMREVLFGHAAYLNESQVPF 542
              +K  LE+GINLY+LHTN+HG+L   KG+Y+ EW  WEKQ+R++LF +A YL   QVPF
Sbjct: 790  DSVKNCLEEGINLYRLHTNRHGRLESTKGTYANEWSKWEKQLRDILFDNAEYLTSIQVPF 849

Query: 543  DFSVKEVVEQLKAAAKGVSAAPRTRKRKIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 722
            + SV++V+EQLK+ AKG    P T KRK G I+FAAV+LPVTEI + L +L +KNP+V+A
Sbjct: 850  ESSVRQVLEQLKSIAKGDYPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEA 909

Query: 723  FLKYKDLHNNLRQAHVTLAHKRAHGVPAVASYGAYVNESVPVDLSALLFSDKLAALETRL 902
            F K K L N+LR AHVTLAHKR+HGV AVA+YG ++N  VPVD +ALLFSDK+AALE   
Sbjct: 910  FFKDKHLENSLRNAHVTLAHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYP 969

Query: 903  GSVGGDKILSKNQWAHATIWTAKGAASKEASTLPKLLSEGKATR 1034
            GSV G++I SKNQW H T+WT  G A KEA+ LP+L+SEG ATR
Sbjct: 970  GSVDGERITSKNQWPHVTLWTGAGVAPKEANMLPELISEGTATR 1013


>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  469 bits (1208), Expect = e-130
 Identities = 230/344 (66%), Positives = 277/344 (80%)
 Frame = +3

Query: 3    KPYVITLADKNAPNEEVWDLIEDMCLSTSASAVPVISDSDGTDSNPYSLDALAVFMFRVF 182
            KP  I LADKNAPNEEVW  IEDMC ST ASAVPV+ DS+GTDSNP+SLDALAVFMFRV 
Sbjct: 806  KPCSIILADKNAPNEEVWRQIEDMCRSTRASAVPVVPDSEGTDSNPFSLDALAVFMFRVL 865

Query: 183  QRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRSPLP 362
            QRVNHPGNLDK   +AGYVLLMFYHL+EGK+R EFESEL ERFG++VKMPL+K+DRS +P
Sbjct: 866  QRVNHPGNLDKASPNAGYVLLMFYHLYEGKSRKEFESELIERFGSLVKMPLLKSDRSTMP 925

Query: 363  SPLKCALEKGINLYKLHTNKHGKLGPAKGSYSKEWVNWEKQMREVLFGHAAYLNESQVPF 542
              +K  LE+GINLY+LHTN+HG+L   KG+Y+ EW  WEKQ+R++LF +A YL   QVPF
Sbjct: 926  DSVKNCLEEGINLYRLHTNRHGRLESTKGTYANEWSKWEKQLRDILFDNAEYLTSIQVPF 985

Query: 543  DFSVKEVVEQLKAAAKGVSAAPRTRKRKIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 722
            + SV++V+EQLK+ AKG    P T KRK G I+FAAV+LPVTEI + L +L +KNP+V+A
Sbjct: 986  ESSVRQVLEQLKSIAKGDYPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEA 1045

Query: 723  FLKYKDLHNNLRQAHVTLAHKRAHGVPAVASYGAYVNESVPVDLSALLFSDKLAALETRL 902
            F K K L N+LR AHVTLAHKR+HGV AVA+YG ++N  VPVD +ALLFSDK+AALE   
Sbjct: 1046 FFKDKHLENSLRNAHVTLAHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYP 1105

Query: 903  GSVGGDKILSKNQWAHATIWTAKGAASKEASTLPKLLSEGKATR 1034
            GSV G++I SKNQW H T+WT  G A KEA+ LP+L+SEG ATR
Sbjct: 1106 GSVDGERITSKNQWPHVTLWTGAGVAPKEANMLPELISEGTATR 1149


>ref|XP_004147268.1| PREDICTED: uncharacterized protein LOC101214899 [Cucumis sativus]
          Length = 1135

 Score =  456 bits (1172), Expect = e-126
 Identities = 222/345 (64%), Positives = 276/345 (80%), Gaps = 2/345 (0%)
 Frame = +3

Query: 3    KPYVITLADKNAPNEEVWDLIEDMCLSTSASAVPVISDSDGTDSNPYSLDALAVFMFRVF 182
            KPY I LADKNAPNEEVW  IEDMC ST ASAVPVI DS+GTDSNP+SLDALAVFMFRV 
Sbjct: 776  KPYSIMLADKNAPNEEVWRQIEDMCRSTRASAVPVIPDSEGTDSNPFSLDALAVFMFRVL 835

Query: 183  QRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRSPLP 362
            QRVNHPGNLDK   +AGYVLLMFYHL++GK+R EFE EL +RFG++VKMPL+K+DR+PLP
Sbjct: 836  QRVNHPGNLDKASPNAGYVLLMFYHLYDGKSRREFEGELIDRFGSLVKMPLLKSDRNPLP 895

Query: 363  SPLKCALEKGINLYKLHTNKHGKLGPAKGSYSKEWVNWEKQMREVLFGHAAYLNESQVPF 542
              LK  LE+GI+LYKLHT++HG++   KGSY+KEW  WEKQ+RE LF +  YLN  QVPF
Sbjct: 896  DDLKTILEEGISLYKLHTSRHGRVDSTKGSYAKEWAKWEKQLRETLFSNTEYLNAIQVPF 955

Query: 543  DFSVKEVVEQLKAAAKGVSAAPRTRKRKIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 722
            + +V++V+EQLK  +KG   +P T +RK G I+FAAV+LPV EI   L +L KKN  ++A
Sbjct: 956  ELAVQDVLEQLKKVSKGDYKSPITERRKSGAIVFAAVSLPVQEIQNLLGTLAKKNSRIEA 1015

Query: 723  FLK--YKDLHNNLRQAHVTLAHKRAHGVPAVASYGAYVNESVPVDLSALLFSDKLAALET 896
            FL+  YKD    L+ AHVTLAHKR+HGV  VA YG + N+ VPV+L+ALLFSDK+AA E 
Sbjct: 1016 FLREHYKDY--KLKGAHVTLAHKRSHGVKGVADYGIFENKEVPVELTALLFSDKMAAFEA 1073

Query: 897  RLGSVGGDKILSKNQWAHATIWTAKGAASKEASTLPKLLSEGKAT 1031
            RLGS+  ++++SKN+W H T+WT +G A+KEA+ LP+L+SEGKAT
Sbjct: 1074 RLGSIENERVISKNEWPHVTLWTREGVAAKEANALPQLVSEGKAT 1118


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  454 bits (1167), Expect = e-125
 Identities = 213/344 (61%), Positives = 284/344 (82%)
 Frame = +3

Query: 3    KPYVITLADKNAPNEEVWDLIEDMCLSTSASAVPVISDSDGTDSNPYSLDALAVFMFRVF 182
            KPY I LADKNAPNEEVW  IE+MCLST ASA+PVI DS+GT++NP+S+DALAVF+FRV 
Sbjct: 809  KPYSIMLADKNAPNEEVWKQIENMCLSTGASAIPVIPDSEGTETNPFSIDALAVFIFRVL 868

Query: 183  QRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRSPLP 362
             RVNHPGNLDK+  +AGYV+LMFYHL++GK+R EFESEL ERFG++V++P++K +RSPLP
Sbjct: 869  HRVNHPGNLDKSSPNAGYVMLMFYHLYDGKSRQEFESELIERFGSLVRIPVLKPERSPLP 928

Query: 363  SPLKCALEKGINLYKLHTNKHGKLGPAKGSYSKEWVNWEKQMREVLFGHAAYLNESQVPF 542
              ++  +E+G++LY+LHT KHG+L   KG+Y +EWV WEKQ+R++L G+A YLN  QVPF
Sbjct: 929  DSVRSIIEEGLSLYRLHTTKHGRLESTKGTYVQEWVKWEKQLRDILLGNADYLNSIQVPF 988

Query: 543  DFSVKEVVEQLKAAAKGVSAAPRTRKRKIGGIIFAAVTLPVTEIITHLQSLGKKNPEVDA 722
            +F+VKEV+EQLK  A+G  A P   KRK+G I+FAA++LPV EI+  L  L KK+P+V  
Sbjct: 989  EFAVKEVLEQLKVIARGEYAVP-AEKRKLGSIVFAAISLPVPEILGLLNDLAKKDPKVGD 1047

Query: 723  FLKYKDLHNNLRQAHVTLAHKRAHGVPAVASYGAYVNESVPVDLSALLFSDKLAALETRL 902
            F+K K + +++++AH+TLAHKR+HGV AVA+YG+++++ VPVD++ALLFSDKLAALE   
Sbjct: 1048 FIKDKSMESSIQKAHLTLAHKRSHGVTAVANYGSFLHQKVPVDVAALLFSDKLAALEAEP 1107

Query: 903  GSVGGDKILSKNQWAHATIWTAKGAASKEASTLPKLLSEGKATR 1034
            GSV G+KI SKN W H T+W+  G A+K+A+TLP+LLS+GKATR
Sbjct: 1108 GSVEGEKINSKNSWPHITLWSGAGVAAKDANTLPQLLSQGKATR 1151


>ref|XP_002323444.1| predicted protein [Populus trichocarpa] gi|222868074|gb|EEF05205.1|
            predicted protein [Populus trichocarpa]
          Length = 1152

 Score =  448 bits (1152), Expect = e-123
 Identities = 221/355 (62%), Positives = 273/355 (76%), Gaps = 11/355 (3%)
 Frame = +3

Query: 3    KPYVITLADKNAPNEEVWDLIEDMCLSTSASAVPVISDSDGTDSNPYSLDALAVFMFRVF 182
            KPY + LADKNAPNEEVW  IE MC ST ASAVPVI DS+GTDSNP+SLDALAVFMFRV 
Sbjct: 782  KPYSVILADKNAPNEEVWRQIEGMCRSTQASAVPVIPDSEGTDSNPFSLDALAVFMFRVL 841

Query: 183  QRVNHPGNLDKTCSSAGYVLLMFYHLHEGKNRIEFESELAERFGTVVKMPLVKADRSPLP 362
            QRVNHPGNLDK+  +AG+VLLMFYHL++GKNR EFESEL ERFG++VKMPL++ DRS LP
Sbjct: 842  QRVNHPGNLDKSSPNAGFVLLMFYHLYDGKNRTEFESELIERFGSLVKMPLLRPDRSSLP 901

Query: 363  SPLKCALEKGINLYKLHTNKHGKLGPAKGSYSKEWVNWEKQMREVLFGHAAYLNESQVPF 542
             P++  LE+GINLY+LHTN HG+L   KGSY KEWV WEKQ+REVL G A +LN  QVPF
Sbjct: 902  DPVRLILEEGINLYRLHTNAHGRLESTKGSYGKEWVKWEKQLREVLIGSAEHLNSIQVPF 961

Query: 543  DFSVKEVVEQLKAAAKGVSAAPRTRKRKIGGIIFAAVTLPVTEIITHLQSLG-------- 698
            + +VK+V EQL+   KG    P T  RK+G IIFAAV+LP TEI + L            
Sbjct: 962  ESAVKQVSEQLQNIIKGEYTPPSTEMRKLGTIIFAAVSLPATEISSLLDKASIMLCYYFL 1021

Query: 699  ---KKNPEVDAFLKYKDLHNNLRQAHVTLAHKRAHGVPAVASYGAYVNESVPVDLSALLF 869
                 NP+V +FLK KD+ +NL++AH+TLAHKR+HGV AVA YG  +++ VPV+L+ALLF
Sbjct: 1022 PSLSNNPKVKSFLKDKDMEHNLKKAHLTLAHKRSHGVTAVARYGHLLHQKVPVELTALLF 1081

Query: 870  SDKLAALETRLGSVGGDKILSKNQWAHATIWTAKGAASKEASTLPKLLSEGKATR 1034
            +D++AALE  +GSV G+K++ KN+W H T+WT +  A+KEA+ LP+LL EGKA R
Sbjct: 1082 TDEMAALEAEVGSVDGEKVIPKNEWPHVTLWTGEKIAAKEANRLPQLLLEGKAIR 1136


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