BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006678
         (1810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   686   0.0  
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]   684   0.0  
ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 h...   682   0.0  
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   671   0.0  
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu...   669   0.0  

>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  686 bits (1771), Expect = 0.0
 Identities = 354/550 (64%), Positives = 405/550 (73%), Gaps = 5/550 (0%)
 Frame = -1

Query: 1672 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPM---HPRGQDGSHFQGQFQSPLRTQT 1502
            M+ NNNN   N+G  S    N+GM S  +P N        +GQ G  FQGQFQ     Q 
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQA 60

Query: 1501 --LNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPSLSTPGTA 1328
              +                                              SSPS+  PG +
Sbjct: 61   HVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNS 120

Query: 1327 SGGAKRVNQKXXXXXPGAANNNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPESA 1148
            +   KR  QK     PG    N++S  K MELTPAARRKK+KLPEKQL DRVAA+LPESA
Sbjct: 121  N--MKRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESA 178

Query: 1147 LYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRIYVFNTYANQIRSIPERQNTEP 968
            LYTQLLEFE+RVDA LARKKIDIQE+LKNPPC+QKTLRIY+FNT+ANQIR+IP++ N EP
Sbjct: 179  LYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEP 238

Query: 967  PSWSLKVIGRILEDGVDPDSGGVIQKPNALYPKFSSFFKKISIALDHSLYPENATITWES 788
            P+W+LK+IGRILE+GVDPD   ++ K N  YPKFSSFFK+++I+LD  LYP+N  I WE+
Sbjct: 239  PTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWEN 298

Query: 787  ARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAIW 608
            ARS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLS  LM+VL IEVDTR R+IAAIW
Sbjct: 299  ARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIW 358

Query: 607  HYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRLS 428
            HYVKARKLQ+P+DP+FF CDPPL+KVFGE++MKF MVSQKIS HL+PPQPIHLEHKI+LS
Sbjct: 359  HYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLS 418

Query: 427  GNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRRAF 248
            GN PAG+ACYDVLVDVPFP+QKE+SA LANTEK+K               IHEHRRRRAF
Sbjct: 419  GNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAF 478

Query: 247  FLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRKP 68
            FLGFSQSPVEFIN LI SQS+DLKLVAGEASRNAEKERRSDF+NQPWVEDAVIRYLNRKP
Sbjct: 479  FLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKP 538

Query: 67   AAGSDAPGST 38
             AGSDAPGST
Sbjct: 539  VAGSDAPGST 548


>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
          Length = 548

 Score =  684 bits (1765), Expect = 0.0
 Identities = 353/550 (64%), Positives = 404/550 (73%), Gaps = 5/550 (0%)
 Frame = -1

Query: 1672 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPM---HPRGQDGSHFQGQFQSPLRTQT 1502
            M+ NNNN   N+G  S    N+GM S  +P N        +GQ G  FQGQFQ     Q 
Sbjct: 1    MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQA 60

Query: 1501 --LNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPSLSTPGTA 1328
              +                                              SSPS+  PG +
Sbjct: 61   HVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNS 120

Query: 1327 SGGAKRVNQKXXXXXPGAANNNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPESA 1148
            +   KR  QK     PG    N++S  K MELTPAARRKK+KLPEKQL DRVAA+LPESA
Sbjct: 121  N--MKRXLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESA 178

Query: 1147 LYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRIYVFNTYANQIRSIPERQNTEP 968
            LYTQLLEFE+RVDA LARKKIDIQE+LKNPPC+QKTLRIY+FNT+ NQIR+IP++ N EP
Sbjct: 179  LYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAEP 238

Query: 967  PSWSLKVIGRILEDGVDPDSGGVIQKPNALYPKFSSFFKKISIALDHSLYPENATITWES 788
            P+W+LK+IGRILE+GVDPD   ++ K N  YPKFSSFFK+++I+LD  LYP+N  I WE+
Sbjct: 239  PTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWEN 298

Query: 787  ARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAIW 608
            ARS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLS  LM+VL IEVDTR R+IAAIW
Sbjct: 299  ARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIW 358

Query: 607  HYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRLS 428
            HYVKARKLQ+P+DP+FF CDPPL+KVFGE++MKF MVSQKIS HL+PPQPIHLEHKI+LS
Sbjct: 359  HYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLS 418

Query: 427  GNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRRAF 248
            GN PAG+ACYDVLVDVPFP+QKE+SA LANTEK+K               IHEHRRRRAF
Sbjct: 419  GNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAF 478

Query: 247  FLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRKP 68
            FLGFSQSPVEFIN LI SQS+DLKLVAGEASRNAEKERRSDF+NQPWVEDAVIRYLNRKP
Sbjct: 479  FLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKP 538

Query: 67   AAGSDAPGST 38
             AGSDAPGST
Sbjct: 539  VAGSDAPGST 548


>ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
          Length = 543

 Score =  682 bits (1761), Expect = 0.0
 Identities = 355/549 (64%), Positives = 410/549 (74%), Gaps = 4/549 (0%)
 Frame = -1

Query: 1672 MSANNNNHTTNMGGPSPLGNNSGMMSSNIPMNHPMHPRGQDGSH----FQGQFQSPLRTQ 1505
            MS NNNN +  +G  S    N+G+ S++IP N P   + Q  +     FQGQF  PL +Q
Sbjct: 1    MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSN-PGFSQSQGQAQIPVGFQGQF--PL-SQ 56

Query: 1504 TLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPSLSTPGTAS 1325
                                                            SSPS+STPG AS
Sbjct: 57   AHAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGVSSPSISTPGNAS 116

Query: 1324 GGAKRVNQKXXXXXPGAANNNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPESAL 1145
            G  KR+  K      G +  NS S  + MELTPAARRKK+KLPEKQL D+VAA+LPESAL
Sbjct: 117  G--KRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESAL 174

Query: 1144 YTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRIYVFNTYANQIRSIPERQNTEPP 965
            YTQLLEFE+RVDA LARKK DIQE+LKNPPCIQKTLRIYVFNT+ANQIR+IP++ N EPP
Sbjct: 175  YTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPP 234

Query: 964  SWSLKVIGRILEDGVDPDSGGVIQKPNALYPKFSSFFKKISIALDHSLYPENATITWESA 785
            +W+LK++GRILEDGVDPD  GV+QK + LYPKFS+FFK+++I+LD  LYP+N  I WE+A
Sbjct: 235  TWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENA 294

Query: 784  RSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAAIWH 605
            RS APHEGFE+KRKGDKEFT  IRLEMNY+PEKFKLSP L +VL IEVDTR R++AAIWH
Sbjct: 295  RSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWH 354

Query: 604  YVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIRLSG 425
            YVKARKLQ+P+DP++F CDPPL+KVFGEE MKF MVSQKIS HL PPQPI LEHKI+LSG
Sbjct: 355  YVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSG 414

Query: 424  NNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRRAFF 245
            N+PAG+ACYDV+VDVPFP+Q+E+SA LAN EK+K               IHEHRRRRAFF
Sbjct: 415  NSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFF 474

Query: 244  LGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNRKPA 65
            LGFSQSPVEFINALI SQSRDLKLV+GE SRNAEKERRSDF+NQPWVEDAVIRYLNRKPA
Sbjct: 475  LGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPA 534

Query: 64   AGSDAPGST 38
            AGSDAPGST
Sbjct: 535  AGSDAPGST 543


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  671 bits (1732), Expect = 0.0
 Identities = 348/552 (63%), Positives = 409/552 (74%), Gaps = 7/552 (1%)
 Frame = -1

Query: 1672 MSANNNNHTTNMGGPS--PLGNNSGMMSSNIPMNHPM----HPRGQDGSHFQGQFQSPLR 1511
            MS NNNN    +GG S  P GN SGM+  ++  N        P+ Q G+ FQ  F  PL 
Sbjct: 1    MSMNNNNPPKTLGGASSSPFGN-SGMVPPSMAANSTSFSQPQPQAQLGAGFQNPF--PLT 57

Query: 1510 T-QTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPSLSTPG 1334
            T Q L                                             + SP  STPG
Sbjct: 58   TAQVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPG 117

Query: 1333 TASGGAKRVNQKXXXXXPGAANNNSVSSFKTMELTPAARRKKRKLPEKQLPDRVAALLPE 1154
             A  G KR+ QK     P  +   + S  KTMELTPAAR+KK+KLPEKQL D+VAA+LPE
Sbjct: 118  LA--GVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPE 175

Query: 1153 SALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRIYVFNTYANQIRSIPERQNT 974
            SALYTQLLEFE+RVDA LARKK+DI E+LKNPPCIQKTLRIYVFNT+ANQ+ +IP++ N 
Sbjct: 176  SALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNA 235

Query: 973  EPPSWSLKVIGRILEDGVDPDSGGVIQKPNALYPKFSSFFKKISIALDHSLYPENATITW 794
            +PP+W+LK+IGRILEDG+DPD  GV+Q+ N LYPKFSSFFK+++I+LD  LYP++  I W
Sbjct: 236  DPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVW 295

Query: 793  ESARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTRARVIAA 614
            E+ARS APHEGFE+KRKGDKEF+  IRLEMNYIPEKFKLSP LM+VL IEVDTR R+IAA
Sbjct: 296  ENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAA 355

Query: 613  IWHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIHLEHKIR 434
            IWHYVKARKLQ+P+DP+FF CDPPL+KVFGE+++KF MVSQ+IS HL PPQPIHLEHK++
Sbjct: 356  IWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVK 415

Query: 433  LSGNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIHEHRRRR 254
            LSGN+PAG+ACYDVLVDVPFP+ +E+SA LAN EK+K               IHEHRRRR
Sbjct: 416  LSGNSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRR 475

Query: 253  AFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAVIRYLNR 74
            AFFLGFSQSPVEFI+ALI SQS+DLKL+AGEASRNAEKERRSDF+NQPWVEDAVIRY+NR
Sbjct: 476  AFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINR 535

Query: 73   KPAAGSDAPGST 38
            KPA GSDAPGST
Sbjct: 536  KPATGSDAPGST 547


>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222845877|gb|EEE83424.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 555

 Score =  669 bits (1726), Expect = 0.0
 Identities = 354/557 (63%), Positives = 407/557 (73%), Gaps = 13/557 (2%)
 Frame = -1

Query: 1672 MSANNNNHTTN----MGGPSPLGNNSGMMSSNIPMNHPMHPRGQD--GSHFQG-QFQSPL 1514
            MS NNNN+  N    +G  S    NSGM++ ++  N P  P+ Q   G+ FQG QFQ   
Sbjct: 1    MSMNNNNNNNNPPKSLGQSSSPFGNSGMVNPSMGAN-PTFPQAQAQMGAGFQGGQFQLSQ 59

Query: 1513 RTQTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------SSP 1352
               TL                                                    SSP
Sbjct: 60   AQATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSP 119

Query: 1351 SLSTPGTASGGAKRVNQKXXXXXPGAANNNSVSSFKTMELTPAARRKKRKLPEKQLPDRV 1172
            S STPG AS  AKR+ QK     PG   ++ VS  K M+L+ AARRKK+KLPEKQL DRV
Sbjct: 120  SFSTPGNAS--AKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRV 177

Query: 1171 AALLPESALYTQLLEFEARVDAGLARKKIDIQESLKNPPCIQKTLRIYVFNTYANQIRSI 992
            AA+LPESALYTQLLEFE RVDA LARKK+DIQE+LK+PPC+QKTLRIYVFNT+ANQIR+I
Sbjct: 178  AAILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTI 237

Query: 991  PERQNTEPPSWSLKVIGRILEDGVDPDSGGVIQKPNALYPKFSSFFKKISIALDHSLYPE 812
            P++ N +PP+W+LKVIGRILEDGVDPD  G +QK N LYPKFSSFFK++SI LD  LYP+
Sbjct: 238  PKKPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPD 297

Query: 811  NATITWESARSAAPHEGFEIKRKGDKEFTAGIRLEMNYIPEKFKLSPPLMDVLAIEVDTR 632
            N  I WE ARS APHEGFE+KRKGDKEF+  IRLEMNY+PEKFKLSP LM+VL IEV+TR
Sbjct: 298  NHIIIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETR 357

Query: 631  ARVIAAIWHYVKARKLQDPSDPAFFKCDPPLRKVFGEERMKFAMVSQKISPHLAPPQPIH 452
             R+IAAIWHYVKARKLQ+P DP+FF CD PL+KVFGE +MKF MVSQ+IS HL+PPQPIH
Sbjct: 358  PRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIH 417

Query: 451  LEHKIRLSGNNPAGSACYDVLVDVPFPLQKEMSAFLANTEKHKXXXXXXXXXXXXXXXIH 272
            LEHKI+LSGN+PAG+ CYDV+VDVPFP+Q+E+SA LAN EK+K               IH
Sbjct: 418  LEHKIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIH 477

Query: 271  EHRRRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEASRNAEKERRSDFYNQPWVEDAV 92
            EHRRRRAFFLGFSQSPVEF+NALI SQS+DLKLVAGEASRNAEKERRSDF+NQPWVEDAV
Sbjct: 478  EHRRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAV 537

Query: 91   IRYLNRKPAAGSDAPGS 41
            IRYLNRKPAAGSDAP S
Sbjct: 538  IRYLNRKPAAGSDAPRS 554