BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006666
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,...   292   5e-77
ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...   281   1e-73
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...   281   1e-73
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...   278   5e-73
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...   278   9e-73

>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
           communis] gi|223542303|gb|EEF43845.1| hepatocellular
           carcinoma-associated antigen, putative [Ricinus
           communis]
          Length = 652

 Score =  292 bits (747), Expect = 5e-77
 Identities = 143/211 (67%), Positives = 168/211 (79%)
 Frame = +1

Query: 43  MADTVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 222
           MADTVQYRLE+MVDELDDLE++G FT  EI EIVK+RR FEY+LKRPSPLKQD+L++IEY
Sbjct: 1   MADTVQYRLERMVDELDDLERRGFFTHQEIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60

Query: 223 EKQLDTXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVIRILRVFRLVTMRFKGDVGLW 402
           E QLDT             +EKG  NKK+K SVSD + V RI+ ++RL   R+KGD+ LW
Sbjct: 61  ETQLDTLRRLRKKSVARDLKEKG--NKKMKMSVSDFAGVSRIVDIYRLAVTRYKGDIDLW 118

Query: 403 YQYLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDLNLNVASARNLMQRGLRA 582
           ++YLEFCR   +GRMK VLAQ++RFHP VPG+W+YAA WEFD NLNVA+AR LMQ GLR 
Sbjct: 119 FRYLEFCRARRNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQSGLRV 178

Query: 583 CPNSEDLWVEYLRMELVYLNKLKARKSLLGE 675
           CPNSEDLW+EYLRMEL YLNKLKARK  LGE
Sbjct: 179 CPNSEDLWIEYLRMELTYLNKLKARKVALGE 209


>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  281 bits (718), Expect = 1e-73
 Identities = 137/211 (64%), Positives = 165/211 (78%)
 Frame = +1

Query: 43  MADTVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 222
           MAD VQYRLE+MV+ELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQD+L++IEY
Sbjct: 1   MADVVQYRLERMVNELDDLERRGVFSRREIAEIVKQRRKFEYRLKRPSPLKQDYLAYIEY 60

Query: 223 EKQLDTXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVIRILRVFRLVTMRFKGDVGLW 402
           EKQLD+             +      KK K+SVSD + V RIL +++L  MR+KGD+ LW
Sbjct: 61  EKQLDSLRRLRKKSVAREAK------KKTKKSVSDFAGVSRILEIYQLAVMRYKGDIDLW 114

Query: 403 YQYLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDLNLNVASARNLMQRGLRA 582
           ++YLEFCR+  +GRMK VLAQV+RFHP VPG+W+YAA WEFD NLN  +AR LMQ GLR 
Sbjct: 115 FRYLEFCRERRNGRMKKVLAQVIRFHPKVPGVWIYAAAWEFDHNLNATAARALMQSGLRV 174

Query: 583 CPNSEDLWVEYLRMELVYLNKLKARKSLLGE 675
           CP SEDLWVEYLRMEL YLNKLKARK  LGE
Sbjct: 175 CPTSEDLWVEYLRMELTYLNKLKARKVALGE 205


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  281 bits (718), Expect = 1e-73
 Identities = 135/212 (63%), Positives = 168/212 (79%), Gaps = 1/212 (0%)
 Frame = +1

Query: 43  MADTVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 222
           MADTVQY+LE+MVDELDDLE+KGIFTR EI EIVK+RR FEY+LKRPSPLKQDFL++I+Y
Sbjct: 1   MADTVQYKLERMVDELDDLERKGIFTRQEIAEIVKQRRKFEYRLKRPSPLKQDFLAYIDY 60

Query: 223 EKQLDTXXXXXXXXXXXXXEEKG-MGNKKIKRSVSDTSCVIRILRVFRLVTMRFKGDVGL 399
           E QLD+             E++G    ++ K+SVSD + + RI+ ++R+  MRFKGD+ L
Sbjct: 61  ETQLDSLRRLRKKSVARELEKQGDKRRRRNKKSVSDFAGISRIVEIYRIAVMRFKGDLEL 120

Query: 400 WYQYLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDLNLNVASARNLMQRGLR 579
           W++YLEFC+   +GRMK VLAQ++RFHP  PG+W+YAA WEFD NLNV++AR LMQ GLR
Sbjct: 121 WFRYLEFCKDKKNGRMKKVLAQLIRFHPKAPGVWIYAAAWEFDHNLNVSAARALMQNGLR 180

Query: 580 ACPNSEDLWVEYLRMELVYLNKLKARKSLLGE 675
            CP+SEDLWVEYLRMEL YLNKL+ RK  LGE
Sbjct: 181 VCPHSEDLWVEYLRMELTYLNKLRVRKVALGE 212


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score =  278 bits (712), Expect = 5e-73
 Identities = 135/211 (63%), Positives = 163/211 (77%)
 Frame = +1

Query: 43  MADTVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 222
           MAD VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLK+DFL+++EY
Sbjct: 1   MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKEDFLAYVEY 60

Query: 223 EKQLDTXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVIRILRVFRLVTMRFKGDVGLW 402
           E QLD              E    GNKK+K+S SD + ++RI+ ++ L   R+KGD+ LW
Sbjct: 61  ETQLDALRRLRKKSVAR--ELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLW 118

Query: 403 YQYLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDLNLNVASARNLMQRGLRA 582
           ++YLEFCR   +GRMK  LA V+RFHP VPG+W+YAA WEFD NLNVA+AR LMQ GLR 
Sbjct: 119 FRYLEFCRLRKNGRMKKALANVIRFHPKVPGIWIYAAAWEFDHNLNVAAARALMQEGLRV 178

Query: 583 CPNSEDLWVEYLRMELVYLNKLKARKSLLGE 675
           CP SEDLWVEYLRMEL YLNKLKARK  LGE
Sbjct: 179 CPTSEDLWVEYLRMELTYLNKLKARKVALGE 209


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score =  278 bits (710), Expect = 9e-73
 Identities = 136/211 (64%), Positives = 162/211 (76%)
 Frame = +1

Query: 43  MADTVQYRLEQMVDELDDLEKKGIFTRLEINEIVKKRRNFEYKLKRPSPLKQDFLSFIEY 222
           MAD VQYRLE+MVDELDDLE++G+F+R EI EIVK+RR FEY+LKRPSPLKQDFL+++EY
Sbjct: 1   MADVVQYRLERMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPSPLKQDFLAYVEY 60

Query: 223 EKQLDTXXXXXXXXXXXXXEEKGMGNKKIKRSVSDTSCVIRILRVFRLVTMRFKGDVGLW 402
           E QLD              E    GNKK+K+S SD + ++RI+ ++ L   R+KGD+ LW
Sbjct: 61  ETQLDALRRLRKKSVAR--ELMKQGNKKLKKSKSDFAGLLRIMDIYELALKRYKGDIDLW 118

Query: 403 YQYLEFCRQHGHGRMKTVLAQVLRFHPNVPGLWMYAAGWEFDLNLNVASARNLMQRGLRA 582
           + YLEFCR   +GRMK  LA V+RFHP VPG+W+YAA WEFD NLNVA+AR LMQ GLR 
Sbjct: 119 FCYLEFCRLRKNGRMKKALANVIRFHPKVPGVWIYAAAWEFDHNLNVAAARALMQEGLRV 178

Query: 583 CPNSEDLWVEYLRMELVYLNKLKARKSLLGE 675
           CP SEDLWVEYLRMEL YLNKLKARK  LGE
Sbjct: 179 CPTSEDLWVEYLRMELTYLNKLKARKVALGE 209