BLASTX nr result

ID: Coptis23_contig00006656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006656
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    85   1e-30
ref|XP_003517928.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    87   2e-29
ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] g...    72   2e-26
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    89   5e-16
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]    88   6e-16

>ref|XP_003545054.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 777

 Score = 84.7 bits (208), Expect(2) = 1e-30
 Identities = 39/73 (53%), Positives = 52/73 (71%)
 Frame = +1

Query: 1   YRESQTVRYNSLRHEALKYVDEGAKTVDLYNVAMRGLQDASKMLSLAKQNGGKLPVANGS 180
           Y ES  VRYN+LRHEA K+VDEGA++ + Y+VAM  LQ+A+K +S   QN GK+P+ NG 
Sbjct: 632 YLESHIVRYNTLRHEAFKFVDEGARSAETYDVAMDALQEAAKRVSQGMQNEGKIPINNGK 691

Query: 181 NQEHANMDEMHSN 219
            + H   DE H+N
Sbjct: 692 VRSHVLNDESHAN 704



 Score = 73.6 bits (179), Expect(2) = 1e-30
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = +3

Query: 333 HRSADDKDKKIDDLHSELDRANRKCEVYRANLLSILKDIEEQKLQLTVKVQNIKL 497
           H S DD DK I  L +EL+ ANRKCE+YR+NLLS+LK +E+ KL+L+VKV+NIK+
Sbjct: 717 HMSKDDLDKNIRKLMNELECANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKI 771


>ref|XP_003517928.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 776

 Score = 87.4 bits (215), Expect(2) = 2e-29
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = +1

Query: 1   YRESQTVRYNSLRHEALKYVDEGAKTVDLYNVAMRGLQDASKMLSLAKQNGGKLPVANGS 180
           Y ES TVRYN+LRHEALK+VDEGA++ + Y+VA+  LQ+A+K +S   QN GK+P++NG 
Sbjct: 632 YLESHTVRYNTLRHEALKFVDEGARSAETYDVAIDALQEAAKRVSQGIQNEGKIPISNGK 691

Query: 181 NQEHANMDEMHSN 219
            + H   DE H+N
Sbjct: 692 VRSHVLNDESHAN 704



 Score = 67.0 bits (162), Expect(2) = 2e-29
 Identities = 33/55 (60%), Positives = 44/55 (80%)
 Frame = +3

Query: 333 HRSADDKDKKIDDLHSELDRANRKCEVYRANLLSILKDIEEQKLQLTVKVQNIKL 497
           H S DD D  I  L +EL+ ANRKCE+YR+NLLS+LK +E+ KL+L+VKV+NIK+
Sbjct: 717 HMSKDDLDN-IRKLMNELECANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKI 770


>ref|XP_003618131.1| FAR1-related protein [Medicago truncatula]
           gi|355519466|gb|AET01090.1| FAR1-related protein
           [Medicago truncatula]
          Length = 786

 Score = 72.4 bits (176), Expect(2) = 2e-26
 Identities = 33/72 (45%), Positives = 49/72 (68%)
 Frame = +1

Query: 1   YRESQTVRYNSLRHEALKYVDEGAKTVDLYNVAMRGLQDASKMLSLAKQNGGKLPVANGS 180
           Y ES TVRYN+LRHEA K+VD+GA + + Y+VA   LQ+A+K ++   +  G+ P++NG 
Sbjct: 641 YLESHTVRYNTLRHEAFKFVDKGASSPETYDVAKDALQEAAKRVAQVMRKEGRTPISNGK 700

Query: 181 NQEHANMDEMHS 216
            + H   DE H+
Sbjct: 701 VRSHLLNDENHA 712



 Score = 71.6 bits (174), Expect(2) = 2e-26
 Identities = 33/55 (60%), Positives = 44/55 (80%)
 Frame = +3

Query: 333 HRSADDKDKKIDDLHSELDRANRKCEVYRANLLSILKDIEEQKLQLTVKVQNIKL 497
           H + DD DK I  L  EL+ ANRKCE+YR+NLLS+LK +E+ KL+L+VKV+NIK+
Sbjct: 726 HMNEDDMDKHITKLTDELECANRKCEMYRSNLLSVLKAVEDHKLELSVKVENIKI 780


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/72 (56%), Positives = 54/72 (75%)
 Frame = +1

Query: 4   RESQTVRYNSLRHEALKYVDEGAKTVDLYNVAMRGLQDASKMLSLAKQNGGKLPVANGSN 183
           RES TVRYN+LRHEALKYVDEG KT+D+YNVA   LQ+A+  ++LAK+NGG++   NG+ 
Sbjct: 644 RESLTVRYNNLRHEALKYVDEGVKTIDIYNVAAAALQEAADKVALAKKNGGRIANVNGAG 703

Query: 184 QEHANMDEMHSN 219
           +E       H+N
Sbjct: 704 REDRTTQGNHAN 715



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +3

Query: 345 DDKDKKIDDLHSELDRANRKCEVYRANLLSILKDIEEQKLQLTVKVQNIKL 497
           DD+D+KI  L  +L+RA RKCEVYRANLLS+LKDIEEQKLQL+VKVQNIKL
Sbjct: 719 DDQDRKIQKLSRQLERARRKCEVYRANLLSVLKDIEEQKLQLSVKVQNIKL 769


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/80 (52%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
 Frame = +1

Query: 4   RESQTVRYNSLRHEALKYVDEGAKTVDLYNVAMRGLQDASKMLSLAKQNGGKLPVANGSN 183
           RES TVRYN+LRHEALKYVDEG KT+D+YNVA   LQ+A+  ++LAK+NGG++   NG+ 
Sbjct: 644 RESLTVRYNNLRHEALKYVDEGVKTIDIYNVAAAALQEAADKVALAKKNGGRIANVNGAG 703

Query: 184 QEHANMDEMHSN---DGHRW 234
           +E       H++     H+W
Sbjct: 704 REDXTTQGNHASASFGDHQW 723


Top