BLASTX nr result

ID: Coptis23_contig00006646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006646
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putativ...   431   e-118
ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118
emb|CAL25351.1| dead-box helicase [Platanus x acerifolia]             429   e-118
ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   428   e-117
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   428   e-117

>ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531759|gb|EEF33579.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 500

 Score =  431 bits (1107), Expect = e-118
 Identities = 217/230 (94%), Positives = 222/230 (96%)
 Frame = -2

Query: 690 SCIKMNVGYLDRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNFAKSALVKPVTV 511
           +C  + +   DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+SALVKPVTV
Sbjct: 211 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 270

Query: 510 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 331
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG
Sbjct: 271 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 330

Query: 330 VEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 151
           VEAVAIHGGKDQEERE AISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 331 VEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 390

Query: 150 VHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAEL 1
           VHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAEL
Sbjct: 391 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 440


>ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|222839009|gb|EEE77360.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  430 bits (1105), Expect = e-118
 Identities = 215/230 (93%), Positives = 222/230 (96%)
 Frame = -2

Query: 690 SCIKMNVGYLDRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNFAKSALVKPVTV 511
           +C  + +   DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+SALVKPVTV
Sbjct: 298 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 357

Query: 510 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 331
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVL+FCENKADVDDIHEYLLLKG
Sbjct: 358 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLVFCENKADVDDIHEYLLLKG 417

Query: 330 VEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 151
           VEAVA+HGGKDQEERE AISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 418 VEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 477

Query: 150 VHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAEL 1
           VHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAEL
Sbjct: 478 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 527


>emb|CAL25351.1| dead-box helicase [Platanus x acerifolia]
          Length = 285

 Score =  429 bits (1103), Expect = e-118
 Identities = 216/220 (98%), Positives = 218/220 (99%)
 Frame = -2

Query: 660 DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNFAKSALVKPVTVNVGRAGAANL 481
           DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+SALVKPVTVNVGRAGAANL
Sbjct: 7   DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANL 66

Query: 480 DVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGK 301
           DVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGK
Sbjct: 67  DVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGK 126

Query: 300 DQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 121
           DQEERE AISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC
Sbjct: 127 DQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 186

Query: 120 GKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAEL 1
           GKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAEL
Sbjct: 187 GKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 226


>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score =  428 bits (1101), Expect = e-117
 Identities = 216/230 (93%), Positives = 221/230 (96%)
 Frame = -2

Query: 690 SCIKMNVGYLDRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNFAKSALVKPVTV 511
           +C  + +   DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+SALVKPVTV
Sbjct: 308 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 367

Query: 510 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 331
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG
Sbjct: 368 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 427

Query: 330 VEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 151
           VEAVAIHGGKDQEERE AISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 428 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 487

Query: 150 VHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAEL 1
           VHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAEL
Sbjct: 488 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 537


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score =  428 bits (1101), Expect = e-117
 Identities = 216/230 (93%), Positives = 221/230 (96%)
 Frame = -2

Query: 690 SCIKMNVGYLDRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNFAKSALVKPVTV 511
           +C  + +   DRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+SALVKPVTV
Sbjct: 308 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 367

Query: 510 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 331
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG
Sbjct: 368 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 427

Query: 330 VEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 151
           VEAVAIHGGKDQEERE AISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 428 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 487

Query: 150 VHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAEL 1
           VHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAEL
Sbjct: 488 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 537


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