BLASTX nr result

ID: Coptis23_contig00006641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006641
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285599.1| PREDICTED: probable glucuronoxylan glucurono...   154   3e-35
ref|XP_002325382.1| predicted protein [Populus trichocarpa] gi|2...   133   5e-29
ref|XP_004167395.1| PREDICTED: probable glucuronoxylan glucurono...   130   3e-28
ref|XP_004144725.1| PREDICTED: probable glucuronoxylan glucurono...   130   3e-28
ref|XP_002871741.1| exostosin family protein [Arabidopsis lyrata...   129   6e-28

>ref|XP_002285599.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Vitis vinifera]
          Length = 513

 Score =  154 bits (388), Expect = 3e-35
 Identities = 84/135 (62%), Positives = 101/135 (74%), Gaps = 14/135 (10%)
 Frame = -2

Query: 365 PNQNPNKSSLLPNPEFSFVTSLEKFLTSRSQIPKPEPI------SSDEEDVKKLDELMWK 204
           PN+NPN ++LLP  E SFV SLE FL S+S  P+  PI      S D E VKKLD+L+W+
Sbjct: 51  PNRNPNLNTLLP--ESSFVASLEHFLISKS--PRSPPIRDDTVGSDDPEAVKKLDDLVWQ 106

Query: 203 KDMDGLFD--YNP------SVLRVYVYEMPAKFTYDLLRLFQNTYKDTSNLTSNGSPVHR 48
           +++  +++  Y P      S +RVYVYEMPAKFTYDLL LF+NTYK+TSN TSNGSPVHR
Sbjct: 107 REIRRVYEDPYYPAASGVTSAIRVYVYEMPAKFTYDLLWLFRNTYKETSNRTSNGSPVHR 166

Query: 47  LIEQHSIDYWLWADL 3
           LIEQHSIDYWLWADL
Sbjct: 167 LIEQHSIDYWLWADL 181


>ref|XP_002325382.1| predicted protein [Populus trichocarpa] gi|222862257|gb|EEE99763.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  133 bits (334), Expect = 5e-29
 Identities = 75/129 (58%), Positives = 88/129 (68%), Gaps = 8/129 (6%)
 Frame = -2

Query: 365 PNQNPNKSSLLPNPEFSFVTSLEKFLTSR----SQIPKPEPISSDEEDVKKLDELMWKKD 198
           PN NPN S     PE SFV SLE FL  +    S    P P  S EEDV + D+ ++ K+
Sbjct: 47  PNTNPNLSL---KPETSFVASLEHFLDHKYPTSSSSSSPFPTVS-EEDVSRFDDQVFSKE 102

Query: 197 MDGLF--DYNPSVL--RVYVYEMPAKFTYDLLRLFQNTYKDTSNLTSNGSPVHRLIEQHS 30
            D  +   Y P  L  RVY+YEMP+KFTYDLL LF+NTY++T NLTSNGSPVHRLIEQHS
Sbjct: 103 RDRFYREPYYPLDLPIRVYLYEMPSKFTYDLLWLFRNTYRNTDNLTSNGSPVHRLIEQHS 162

Query: 29  IDYWLWADL 3
           +DYWLWADL
Sbjct: 163 VDYWLWADL 171


>ref|XP_004167395.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Cucumis sativus]
          Length = 517

 Score =  130 bits (327), Expect = 3e-28
 Identities = 75/137 (54%), Positives = 91/137 (66%), Gaps = 17/137 (12%)
 Frame = -2

Query: 362 NQNPNKSSLLP-----NPEFSFVTSLEKFLTSRSQIPKPEPISSD--------EEDVKKL 222
           N +PN +S         PE SFV SLE FLT +  +PK  P+  D        E+  +KL
Sbjct: 47  NPHPNTTSFHSPISSLKPETSFVVSLEHFLTHK--VPKSPPLRDDTAPVAGDVEDASRKL 104

Query: 221 DELMWKKDMDGLF--DYNP--SVLRVYVYEMPAKFTYDLLRLFQNTYKDTSNLTSNGSPV 54
           DE + + +M+ +    Y P  S +RVYVYEMP KFTYDLL  F+NTY++TSNLTSNGSPV
Sbjct: 105 DEALSEAEMERVIRDPYFPLGSPIRVYVYEMPWKFTYDLLWTFRNTYRETSNLTSNGSPV 164

Query: 53  HRLIEQHSIDYWLWADL 3
           HRLIEQHSIDYWLWADL
Sbjct: 165 HRLIEQHSIDYWLWADL 181


>ref|XP_004144725.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Cucumis sativus]
          Length = 518

 Score =  130 bits (327), Expect = 3e-28
 Identities = 75/137 (54%), Positives = 91/137 (66%), Gaps = 17/137 (12%)
 Frame = -2

Query: 362 NQNPNKSSLLP-----NPEFSFVTSLEKFLTSRSQIPKPEPISSD--------EEDVKKL 222
           N +PN +S         PE SFV SLE FLT +  +PK  P+  D        E+  +KL
Sbjct: 47  NPHPNPTSFHSPISSLKPETSFVVSLEHFLTHK--VPKSPPLRDDTAPVAGDVEDASRKL 104

Query: 221 DELMWKKDMDGLF--DYNP--SVLRVYVYEMPAKFTYDLLRLFQNTYKDTSNLTSNGSPV 54
           DE + + +M+ +    Y P  S +RVYVYEMP KFTYDLL  F+NTY++TSNLTSNGSPV
Sbjct: 105 DEALSEAEMERVIRDPYFPLGSPIRVYVYEMPWKFTYDLLWTFRNTYRETSNLTSNGSPV 164

Query: 53  HRLIEQHSIDYWLWADL 3
           HRLIEQHSIDYWLWADL
Sbjct: 165 HRLIEQHSIDYWLWADL 181


>ref|XP_002871741.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317578|gb|EFH48000.1| exostosin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 510

 Score =  129 bits (325), Expect = 6e-28
 Identities = 74/134 (55%), Positives = 96/134 (71%), Gaps = 14/134 (10%)
 Frame = -2

Query: 362 NQNPNKSSLLPN--PEFSFVTSLEKFLTSRSQIPKPE-PISSD------EEDVKKLDELM 210
           +  P+ S+L P+  PE SFVTSLE FLT ++  PK   P+  D      ++DV+KLDE++
Sbjct: 40  SSRPSISNLNPSDQPETSFVTSLEHFLTHKA--PKLSLPVRDDTVRGESDDDVRKLDEMV 97

Query: 209 WKKDMDGLFDYNPSV-----LRVYVYEMPAKFTYDLLRLFQNTYKDTSNLTSNGSPVHRL 45
           ++++   L + +P       ++VYVYEMP KFT+DLL LF NTYK+TSN TSNGSPVHRL
Sbjct: 98  FERENRWLNE-DPGYPVGFPIKVYVYEMPKKFTFDLLWLFHNTYKETSNATSNGSPVHRL 156

Query: 44  IEQHSIDYWLWADL 3
           IEQHSIDYWLWADL
Sbjct: 157 IEQHSIDYWLWADL 170


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