BLASTX nr result

ID: Coptis23_contig00006625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006625
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein A...   463   e-128
emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]   461   e-127
ref|XP_002520111.1| homeobox protein, putative [Ricinus communis...   450   e-124
ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
ref|XP_002315797.1| predicted protein [Populus trichocarpa] gi|2...   430   e-118

>ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
           vinifera]
          Length = 285

 Score =  463 bits (1191), Expect = e-128
 Identities = 234/282 (82%), Positives = 252/282 (89%), Gaps = 3/282 (1%)
 Frame = +3

Query: 129 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRSMSFSG 308
           MTCN MAFFP+NFMLQT   +D     PP SLNPILPSC PQDFHGVAS LGKRSMSFSG
Sbjct: 1   MTCNGMAFFPANFMLQTPREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSMSFSG 57

Query: 309 IDVCEEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQ 488
           IDVCEE NGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLARALGLQ
Sbjct: 58  IDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQ 117

Query: 489 PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNREP 668
           PRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+A+KA+NDALQAQN+KLHAE+LALK+REP
Sbjct: 118 PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKAENDALQAQNQKLHAEMLALKSREP 177

Query: 669 TECINLN-KETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP-SRPLFPSSIRSTSMVQ 842
           TE INLN KETEGSCSNRSENSSDI LDISRTPAIDSPLS++P SRPLFPSSIR   +VQ
Sbjct: 178 TESINLNIKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHPTSRPLFPSSIRPAGVVQ 237

Query: 843 LLQN-TTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPW 965
           L QN +++ DLQ QK+D   V+EESFCNMFC +DDQ GFWPW
Sbjct: 238 LFQNSSSRPDLQCQKMD-QPVKEESFCNMFCGMDDQSGFWPW 278


>emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score =  461 bits (1185), Expect = e-127
 Identities = 233/282 (82%), Positives = 251/282 (89%), Gaps = 3/282 (1%)
 Frame = +3

Query: 129 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRSMSFSG 308
           MTCN MAFFP+NFMLQT   +D     PP SLNPILPSC PQDFHGVAS LGKRSMSFSG
Sbjct: 1   MTCNGMAFFPANFMLQTPREDDHQ---PPNSLNPILPSCAPQDFHGVASLLGKRSMSFSG 57

Query: 309 IDVCEEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQ 488
           IDVCEE NGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKM LARALGLQ
Sbjct: 58  IDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMXLARALGLQ 117

Query: 489 PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNREP 668
           PRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+A+KA+NDALQAQN+KLHAE+LALK+REP
Sbjct: 118 PRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAVKAENDALQAQNQKLHAEMLALKSREP 177

Query: 669 TECINLN-KETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP-SRPLFPSSIRSTSMVQ 842
           TE INLN KETEGSCSNRSENSSDI LDISRTPAIDSPLS++P SRPLFPSSIR   +VQ
Sbjct: 178 TESINLNIKETEGSCSNRSENSSDIKLDISRTPAIDSPLSTHPTSRPLFPSSIRPAGVVQ 237

Query: 843 LLQN-TTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPW 965
           L QN +++ DLQ QK+D   V+EESFCNMFC +DDQ GFWPW
Sbjct: 238 LFQNSSSRPDLQCQKMD-QPVKEESFCNMFCGMDDQSGFWPW 278


>ref|XP_002520111.1| homeobox protein, putative [Ricinus communis]
           gi|223540603|gb|EEF42166.1| homeobox protein, putative
           [Ricinus communis]
          Length = 296

 Score =  450 bits (1158), Expect = e-124
 Identities = 235/292 (80%), Positives = 249/292 (85%), Gaps = 13/292 (4%)
 Frame = +3

Query: 129 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRSMSFSG 308
           MTCN MAFFP+NFMLQT H ED  H  PPTSLNPILPSCT  DFHGVASFLGKRSMS SG
Sbjct: 1   MTCNGMAFFPANFMLQTPHEED--HHQPPTSLNPILPSCTTHDFHGVASFLGKRSMSCSG 58

Query: 309 IDVC--EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALG 482
           ID    EEANGEDDLSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLARALG
Sbjct: 59  IDASCHEEANGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 118

Query: 483 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 662
           LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQF+AIKADNDALQAQN+KLHAEI+ALK+R
Sbjct: 119 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDALQAQNQKLHAEIMALKSR 178

Query: 663 EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSNP--SRPLFP--SSIRST 830
           EPTE INLNKETEGSCSNRSENSSDI LDISRTPAIDSPLS++P  SRPLFP  SSIR T
Sbjct: 179 EPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLSNHPITSRPLFPSSSSIRPT 238

Query: 831 SMVQLLQNTTKS-------DLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPW 965
            +  L  N++ S       ++Q QKID   V+EES  NMFC IDDQ GFWPW
Sbjct: 239 GVAHLFHNSSSSRPDSHHHNIQCQKID-QMVKEESLSNMFCGIDDQSGFWPW 289


>ref|XP_002311597.1| predicted protein [Populus trichocarpa] gi|222851417|gb|EEE88964.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  441 bits (1134), Expect = e-121
 Identities = 228/285 (80%), Positives = 250/285 (87%), Gaps = 6/285 (2%)
 Frame = +3

Query: 129 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRS-MSFS 305
           MTCN MAFFP+NFMLQ+SH  DQD   PPTSLNPILPSC P+DFHGVA FLGKRS MSFS
Sbjct: 1   MTCNGMAFFPTNFMLQSSH--DQDDHQPPTSLNPILPSCAPRDFHGVAPFLGKRSSMSFS 58

Query: 306 GIDVC-EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALG 482
           GIDVC EE NGED+LSDDGSQ GEKKRRL+MEQV+TLEKNFELGNKLEPERKMQLARALG
Sbjct: 59  GIDVCHEEGNGEDELSDDGSQAGEKKRRLSMEQVKTLEKNFELGNKLEPERKMQLARALG 118

Query: 483 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 662
           LQPRQIAIWFQNRRARWKTKQLE DYDLLKRQFDA+KA+N+ALQ QN++LHAEILALK+R
Sbjct: 119 LQPRQIAIWFQNRRARWKTKQLEIDYDLLKRQFDAVKAENNALQTQNQRLHAEILALKSR 178

Query: 663 EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSN--PSRPLFP-SSIRSTS 833
           EPTE INLNKETEGSCSNRSENSSDI LDISRTPAIDSPL ++   SRP FP SSIR T 
Sbjct: 179 EPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLPNHHPTSRPFFPSSSIRPTG 238

Query: 834 MVQLLQ-NTTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPW 965
           + QL Q N+++ D Q+QK+DH  V+EES  NM CSI+DQ GFWPW
Sbjct: 239 IAQLNQNNSSRPDFQYQKMDH-IVKEESLTNMLCSIEDQSGFWPW 282


>ref|XP_002315797.1| predicted protein [Populus trichocarpa] gi|222864837|gb|EEF01968.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  430 bits (1105), Expect = e-118
 Identities = 231/294 (78%), Positives = 247/294 (84%), Gaps = 15/294 (5%)
 Frame = +3

Query: 129 MTCNEMAFFPSNFMLQTSHHEDQDHRHPPTSLNPILPSCTPQDFHGVASFLGKRS-MSFS 305
           MTCN MAFFP+NFMLQ SH  DQD   PPTSLNPILPS  PQDFHGVASF+GKRS MSFS
Sbjct: 1   MTCNGMAFFPTNFMLQISH--DQDDHQPPTSLNPILPS--PQDFHGVASFIGKRSSMSFS 56

Query: 306 GIDVC-EEANGEDDLSDDGSQVGEKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALG 482
           GID C EE NGED+LSDDGSQ GEKKRRLNMEQV+TLEKNFELGNKLEPERKMQLARALG
Sbjct: 57  GIDACHEEGNGEDELSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 116

Query: 483 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQAQNKKLHAEILALKNR 662
           LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKA+NDALQAQN+KLHAEIL LK+R
Sbjct: 117 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKAENDALQAQNQKLHAEILTLKSR 176

Query: 663 EPTECINLNKETEGSCSNRSENSSDINLDISRTPAIDSPLSSN--PSRPLFPSS------ 818
           EPTE INLNKETEGS SNRSENSSDI LDISRTPAIDSPLS++   SR  FPSS      
Sbjct: 177 EPTEPINLNKETEGSSSNRSENSSDIKLDISRTPAIDSPLSNHHPTSRSFFPSSSSSIRP 236

Query: 819 ----IRSTSMVQLLQ-NTTKSDLQFQKIDHNNVQEESFCNMFCSIDDQPGFWPW 965
               IR T + QL Q N ++ D+Q QKID   V+EE+  NMFCSI+DQ GFWPW
Sbjct: 237 AGVAIRPTGVAQLFQTNPSRPDIQCQKID-QLVKEENLGNMFCSIEDQSGFWPW 289


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