BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006612
         (1333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k...   303   9e-80
gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays] gi|...   294   4e-77
ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea ma...   293   7e-77
ref|NP_001045073.1| Os01g0895100 [Oryza sativa Japonica Group] g...   291   3e-76
ref|XP_002886831.1| hypothetical protein ARALYDRAFT_893907 [Arab...   291   3e-76

>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein,
           chloroplastic [Vitis vinifera]
           gi|297735245|emb|CBI17607.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  303 bits (775), Expect = 9e-80
 Identities = 165/221 (74%), Positives = 183/221 (82%)
 Frame = -1

Query: 823 LTKMRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYAD 644
           LTKMRQATAQV+ASQK+LEN+ K+AQQASEDWY+RAQLAL KGDE+LAREALKRRKSYAD
Sbjct: 105 LTKMRQATAQVLASQKQLENRYKAAQQASEDWYKRAQLALGKGDEDLAREALKRRKSYAD 164

Query: 643 NASSMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXKVNEMLGTV 464
           NAS++K QLDQQKTVV+NLVSNTRLLESKIQEA+SKKD             KV+EMLG V
Sbjct: 165 NASALKAQLDQQKTVVENLVSNTRLLESKIQEAKSKKDTLKARAQSAKTASKVSEMLGNV 224

Query: 463 NTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXX 284
           NTSSALSAF+KMEEKVLAMESQAEAL QL TDDLEGKFA+LE+SSVDDDLA+        
Sbjct: 225 NTSSALSAFEKMEEKVLAMESQAEALNQLTTDDLEGKFALLESSSVDDDLASLKKELSGS 284

Query: 283 XXXXXLPPGRTTVSSTNTPFPFADTEIDKELNELRRKVKEF 161
                LPPGRT V+S NT FPF D+EI+KELNELRRK  EF
Sbjct: 285 SKKGELPPGRTAVAS-NTAFPFRDSEIEKELNELRRKASEF 324


>gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays]
           gi|219884263|gb|ACL52506.1| unknown [Zea mays]
          Length = 316

 Score =  294 bits (752), Expect = 4e-77
 Identities = 158/221 (71%), Positives = 178/221 (80%)
 Frame = -1

Query: 823 LTKMRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYAD 644
           LTKMRQATAQV+ASQKRLENK K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYAD
Sbjct: 96  LTKMRQATAQVLASQKRLENKSKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYAD 155

Query: 643 NASSMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXKVNEMLGTV 464
           NASS+++QLDQQK VV+NL+SNTRLLESKI EA+ KKD             KV+EMLG V
Sbjct: 156 NASSLRSQLDQQKGVVENLISNTRLLESKISEAKQKKDTLKARAQSAKTATKVSEMLGNV 215

Query: 463 NTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXX 284
           NTSSALSAF+KMEEKV+AMESQAEAL QLATDDLEGKFA+LETSSVDDDL+         
Sbjct: 216 NTSSALSAFEKMEEKVMAMESQAEALGQLATDDLEGKFALLETSSVDDDLSQLKKELSGS 275

Query: 283 XXXXXLPPGRTTVSSTNTPFPFADTEIDKELNELRRKVKEF 161
                LPPGRT VS++    PF D EI+ ELNELRRK KE+
Sbjct: 276 SLKGELPPGRTAVSNSGAGRPFPDLEIESELNELRRKAKEY 316



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = -2

Query: 1194 MAIRAPPVTGLCLAXXXXXXXXSNRIVFLRNSFLNGGV-LKVSRLSLPP-NRFRCNGVKM 1021
            M IRAPP T L LA          R   LR SFL G V LKV ++     NRF+CN ++ 
Sbjct: 1    MEIRAPP-TSLRLAPPPASASF--RRTPLRTSFLRGSVSLKVVQVRQSNVNRFKCNSIRS 57

Query: 1020 NLFDRFARVVKSYANAIIST 961
            NLFDR  RVV+SYANA++S+
Sbjct: 58   NLFDRLTRVVRSYANAVLSS 77


>ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea mays]
           gi|194688738|gb|ACF78453.1| unknown [Zea mays]
           gi|194701220|gb|ACF84694.1| unknown [Zea mays]
           gi|414879244|tpg|DAA56375.1| TPA: IM30 protein-like
           protein [Zea mays]
          Length = 316

 Score =  293 bits (750), Expect = 7e-77
 Identities = 158/221 (71%), Positives = 178/221 (80%)
 Frame = -1

Query: 823 LTKMRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYAD 644
           LTKMRQATAQV+ASQKRLENK K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYAD
Sbjct: 96  LTKMRQATAQVLASQKRLENKYKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYAD 155

Query: 643 NASSMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXKVNEMLGTV 464
           NASS+++QLDQQK VV+NL+SNTRLLESKI EA+ KKD             KV+EMLG V
Sbjct: 156 NASSLRSQLDQQKGVVENLISNTRLLESKIAEAKQKKDTLKARAQSAKTATKVSEMLGNV 215

Query: 463 NTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXX 284
           NTSSALSAF+KMEEKV+AMESQAEAL QLATDDLEGKFA+LETSSVDDDL+         
Sbjct: 216 NTSSALSAFEKMEEKVMAMESQAEALGQLATDDLEGKFALLETSSVDDDLSQLKKELSGS 275

Query: 283 XXXXXLPPGRTTVSSTNTPFPFADTEIDKELNELRRKVKEF 161
                LPPGRT VS++    PF D EI+ ELNELRRK KE+
Sbjct: 276 SLKGELPPGRTAVSNSGAGRPFPDLEIESELNELRRKAKEY 316



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = -2

Query: 1194 MAIRAPPVTGLCLAXXXXXXXXSNRIVFLRNSFLNGGV-LKVSRLSLPP-NRFRCNGVKM 1021
            M IRAPP T L LA          R   LR SFL G V LKV ++     NRF+CN ++ 
Sbjct: 1    MEIRAPP-TSLRLAPPPAAASF--RRTPLRTSFLRGSVSLKVVQVRQSNVNRFKCNSIRS 57

Query: 1020 NLFDRFARVVKSYANAIIST 961
            NLFDR  RVV+SYANA++S+
Sbjct: 58   NLFDRLTRVVRSYANAVLSS 77


>ref|NP_001045073.1| Os01g0895100 [Oryza sativa Japonica Group]
           gi|44888076|sp|Q8S0J7.1|IM30_ORYSJ RecName:
           Full=Probable membrane-associated 30 kDa protein,
           chloroplastic; Flags: Precursor
           gi|20161290|dbj|BAB90216.1| putative membrane-associated
           30 kDa protein, chloroplast precursor [Oryza sativa
           Japonica Group] gi|21952843|dbj|BAC06258.1| putative
           chloroplast membrane-associated 30 kD protein [Oryza
           sativa Japonica Group] gi|113534604|dbj|BAF06987.1|
           Os01g0895100 [Oryza sativa Japonica Group]
           gi|125572953|gb|EAZ14468.1| hypothetical protein
           OsJ_04390 [Oryza sativa Japonica Group]
           gi|215695356|dbj|BAG90547.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765055|dbj|BAG86752.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 317

 Score =  291 bits (745), Expect = 3e-76
 Identities = 157/221 (71%), Positives = 176/221 (79%)
 Frame = -1

Query: 823 LTKMRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYAD 644
           LTKMRQATAQV+ASQKRLENK K+A+QAS+DWYRRAQLAL+KGDE+LAREALKRRKSYAD
Sbjct: 97  LTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYAD 156

Query: 643 NASSMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXKVNEMLGTV 464
           NASS+K QLDQQK VV+NLVSNTR+LESKI EA+ KKD             KV+EMLG V
Sbjct: 157 NASSLKAQLDQQKGVVENLVSNTRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNV 216

Query: 463 NTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXX 284
           NTS ALSAF+KMEEKV+AMESQAEAL QLATDDLEGKFA+LETSSVDDDLA         
Sbjct: 217 NTSGALSAFEKMEEKVMAMESQAEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGS 276

Query: 283 XXXXXLPPGRTTVSSTNTPFPFADTEIDKELNELRRKVKEF 161
                LPPGRT VS++    PF D EI+ ELNELR+K  E+
Sbjct: 277 SSKGELPPGRTAVSNSGAARPFRDIEIENELNELRKKANEY 317



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
 Frame = -2

Query: 1194 MAIRAPPVTGLCLAXXXXXXXXSNRIVFLRNSFLNGGV----LKVSRLSLPPNRFRCNGV 1027
            M IRAPP T L LA          R   LR SFLNG V    ++V + ++  NRF+CNG+
Sbjct: 1    MEIRAPP-TSLRLAPPPPASASFRRTA-LRTSFLNGSVSLRLIQVRQSNV--NRFKCNGI 56

Query: 1026 KMNLFDRFARVVKSYANAIIST 961
            + NL DRF+RVVKSYANA++S+
Sbjct: 57   RSNLLDRFSRVVKSYANAVLSS 78


>ref|XP_002886831.1| hypothetical protein ARALYDRAFT_893907 [Arabidopsis lyrata subsp.
           lyrata] gi|297332672|gb|EFH63090.1| hypothetical protein
           ARALYDRAFT_893907 [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  291 bits (745), Expect = 3e-76
 Identities = 155/221 (70%), Positives = 182/221 (82%)
 Frame = -1

Query: 823 LTKMRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYAD 644
           LTKMRQATAQV+ASQK+L+NK K+AQQAS+DWY+RAQLAL KGDE+LAREALKRRKS+AD
Sbjct: 110 LTKMRQATAQVLASQKQLQNKYKAAQQASDDWYKRAQLALAKGDEDLAREALKRRKSFAD 169

Query: 643 NASSMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXKVNEMLGTV 464
           NAS++KTQLDQQK VVDNLVSNTRLLESKIQEA++KKD             KV EM+GTV
Sbjct: 170 NASALKTQLDQQKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTV 229

Query: 463 NTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXX 284
           NTS ALSAF+KMEEKV+AMES+A+ALTQ+ TD+LEGKF MLETSSVDDDLAN        
Sbjct: 230 NTSGALSAFEKMEEKVMAMESEADALTQIGTDELEGKFQMLETSSVDDDLANLKKELSGS 289

Query: 283 XXXXXLPPGRTTVSSTNTPFPFADTEIDKELNELRRKVKEF 161
                LPPGR+TV++ +T +PF D+EI+ ELNELRRK  +F
Sbjct: 290 SKKGELPPGRSTVAA-STRYPFKDSEIENELNELRRKANDF 329