BLASTX nr result

ID: Coptis23_contig00006605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006605
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67499.1| hypothetical protein VITISV_019679 [Vitis vinifera]    42   3e-06
ref|XP_002282068.2| PREDICTED: B3 domain-containing protein Os01...    42   4e-06
emb|CBI32429.3| unnamed protein product [Vitis vinifera]               42   4e-06

>emb|CAN67499.1| hypothetical protein VITISV_019679 [Vitis vinifera]
          Length = 930

 Score = 42.4 bits (98), Expect(3) = 3e-06
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +2

Query: 389 NLSESINLKLCPEAISQTVDTADAIKTYNLGNSQDNFVALLEILGQLEHLGTNVQLL 559
           +L + +N KL    IS+TV+ ADAI+   L  S+DNF    + L   + LG NV  L
Sbjct: 476 HLLDGLNYKLAAGIISETVNIADAIRASKLTTSRDNFSIWSKTLKAFQELGMNVSFL 532



 Score = 33.9 bits (76), Expect(3) = 3e-06
 Identities = 16/44 (36%), Positives = 29/44 (65%)
 Frame = +1

Query: 208 DSDNEIFGSVVPKVTKVLEITIEFKDVKILESFVIAMKGLILSS 339
           ++D++  GS V +  +  E  ++FK+VK +E F I + GLI++S
Sbjct: 409 ENDSDGHGSEVLERIRFSESAVDFKEVKSMEDFSILVNGLIINS 452



 Score = 20.4 bits (41), Expect(3) = 3e-06
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 324 IDPQFSTNVLSKYYEARKNQEQIFQKALI 410
           I+ +FS ++ +KYYE   +Q+      L+
Sbjct: 450 INSEFSKHLQTKYYELCCSQKTYLHDHLL 478


>ref|XP_002282068.2| PREDICTED: B3 domain-containing protein Os01g0234100-like [Vitis
           vinifera]
          Length = 463

 Score = 41.6 bits (96), Expect(3) = 4e-06
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +2

Query: 389 NLSESINLKLCPEAISQTVDTADAIKTYNLGNSQDNFVALLEILGQLEHLGTNVQLL 559
           +L + +N KL    IS+TV+ ADAI+   L  S+DNF    + L   + LG NV  L
Sbjct: 332 HLLDGLNYKLAAGIISETVNIADAIRASKLTTSRDNFSIWSKTLKAFQELGMNVGFL 388



 Score = 34.3 bits (77), Expect(3) = 4e-06
 Identities = 16/44 (36%), Positives = 30/44 (68%)
 Frame = +1

Query: 208 DSDNEIFGSVVPKVTKVLEITIEFKDVKILESFVIAMKGLILSS 339
           ++D++  GS V +  +  E  ++FK+VK +E+F I + GLI++S
Sbjct: 265 ENDSDGHGSEVLERIRFSESAVDFKEVKSMEAFSILVNGLIINS 308



 Score = 20.4 bits (41), Expect(3) = 4e-06
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 324 IDPQFSTNVLSKYYEARKNQEQIFQKALI 410
           I+ +FS ++ +KYYE   +Q+      L+
Sbjct: 306 INSEFSKHLQTKYYELCCSQKTYLHDHLL 334


>emb|CBI32429.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score = 41.6 bits (96), Expect(3) = 4e-06
 Identities = 23/57 (40%), Positives = 32/57 (56%)
 Frame = +2

Query: 389 NLSESINLKLCPEAISQTVDTADAIKTYNLGNSQDNFVALLEILGQLEHLGTNVQLL 559
           +L + +N KL    IS+TV+ ADAI+   L  S+DNF    + L   + LG NV  L
Sbjct: 232 HLLDGLNYKLAAGIISETVNIADAIRASKLTTSRDNFSIWSKTLKAFQELGMNVGFL 288



 Score = 34.3 bits (77), Expect(3) = 4e-06
 Identities = 16/44 (36%), Positives = 30/44 (68%)
 Frame = +1

Query: 208 DSDNEIFGSVVPKVTKVLEITIEFKDVKILESFVIAMKGLILSS 339
           ++D++  GS V +  +  E  ++FK+VK +E+F I + GLI++S
Sbjct: 165 ENDSDGHGSEVLERIRFSESAVDFKEVKSMEAFSILVNGLIINS 208



 Score = 20.4 bits (41), Expect(3) = 4e-06
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 324 IDPQFSTNVLSKYYEARKNQEQIFQKALI 410
           I+ +FS ++ +KYYE   +Q+      L+
Sbjct: 206 INSEFSKHLQTKYYELCCSQKTYLHDHLL 234


Top