BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006598
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548697.1| PREDICTED: putative ribonuclease H protein A...    74   9e-12
ref|XP_003541064.1| PREDICTED: uncharacterized protein LOC100796...    71   8e-11
ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813...    70   1e-10
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    67   2e-09
ref|XP_003522482.1| PREDICTED: uncharacterized protein LOC100817...    66   3e-09

>ref|XP_003548697.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 600

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
 Frame = -2

Query: 303 WGQDKGGNLTVKSVYKFLKPT-QELGQSSSCNHLTLKHLWKAPLPAYIQMFLWKLYMQIL 127
           W  +  G ++ KSVY+ +KP   + GQ     HL  K+LW+   P     F W+L    L
Sbjct: 402 WRAESTGIISTKSVYQVIKPELHDEGQ-----HLGFKNLWETKAPPKALSFAWRLLWDRL 456

Query: 126 PTGDVLAVRNIKGDFS-CPFCSKELESAEHLLFTCEWVRPVWF 1
           PT D L  R I+ D   CPFC  + E+A HL FTC  + P+W+
Sbjct: 457 PTKDNLTKRQIQVDNDLCPFCHSQPETASHLFFTCGKIMPMWW 499


>ref|XP_003541064.1| PREDICTED: uncharacterized protein LOC100796216 [Glycine max]
          Length = 646

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = -2

Query: 303 WGQDKGGNLTVKSVYKFLKPTQELGQSSSCNHLTLKHLWKAPLPAYIQMFLWKLYMQILP 124
           WG +  G L+ KS Y  +K  Q L    S  H     LW   +P  +  F W+L    LP
Sbjct: 448 WGAEPNGILSTKSAYNLIKAEQLLEDQDSGFH----QLWDLKVPPKVLSFAWRLLWDRLP 503

Query: 123 TGDVLAVRNIKGDFS-CPFCSKELESAEHLLFTCEWVRPVWF 1
           T D L+ R I+ D   CP C  + E+  HL FTC+ V P+W+
Sbjct: 504 TKDNLSRRQIQLDNDLCPLCQTQPETTSHLFFTCDKVLPLWW 545


>ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813631 [Glycine max]
          Length = 1227

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = -2

Query: 303  WGQDKGGNLTVKSVYKFLKPTQELGQSSSCNHLTLKHLWKAPLPAYIQMFLWKLYMQILP 124
            WG +  G  + KS Y  +K  Q L    S  H     LW   +P  +  F W+L    LP
Sbjct: 1029 WGAEPNGIFSTKSAYNLIKAEQLLEDQYSGFH----QLWDLKVPPKVLSFAWRLLWDRLP 1084

Query: 123  TGDVLAVRNIKGDFS-CPFCSKELESAEHLLFTCEWVRPVWF 1
            T D L+ R I+ D   CP C  + E+A HL FTC+ V P+W+
Sbjct: 1085 TKDNLSRRQIQLDNDLCPLCQTQPETASHLFFTCDKVLPLWW 1126


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
 Frame = -2

Query: 303  WGQDKGGNLTVKSVYKFLKPTQE---------LGQSSS-CNHLTLKHLWKAPLPAYIQMF 154
            W  DK G  TV+S Y+ L   +           G+SS+  +      LW   +P+ I++F
Sbjct: 1047 WHYDKNGIFTVRSAYRMLVLRKNNMTACSDSVAGRSSTKADEKEWTALWHVQVPSKIKVF 1106

Query: 153  LWKLYMQILPTGDVLAVRNIKGDFSCPFCSKELESAEHLLFTCEWVRPVW 4
            LW+L  Q LP+GDVL  RN+K   +C  C   L+S +H L  C   + VW
Sbjct: 1107 LWRLARQSLPSGDVLHHRNLKAQSTCAICG-ALDSWKHSLIDCHMAKCVW 1155


>ref|XP_003522482.1| PREDICTED: uncharacterized protein LOC100817327 [Glycine max]
          Length = 498

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
 Frame = -2

Query: 306 KWGQDKGGNLTVKSVYKFLKPTQELGQSSSCNHLTLKHLWKAPLPAYIQMFLWKLYMQIL 127
           +W  D  G  +  S Y  L+    +G    C     + LWK  +P+ I +F W+L+   L
Sbjct: 336 EWVGDPSGIYSTHSAYNMLREELAVGNQEEC----FEELWKIKIPSKIVVFAWRLFKDRL 391

Query: 126 PTGDVLAVRNIKG-DFSCPFCSKELESAEHLLFTCEWVRPVWF 1
           PT   L  R ++  D  CPFC +  E A HL   C  ++P+W+
Sbjct: 392 PTKKNLQKRQMQILDSLCPFCKRVDEDASHLFIHCNKIQPIWW 434