BLASTX nr result

ID: Coptis23_contig00006597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006597
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]    94   3e-21
ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisom...    94   3e-21
ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-20
ref|XP_002528799.1| ATP-dependent protease La, putative [Ricinus...    91   2e-20
ref|XP_003578503.1| PREDICTED: lon protease homolog 2, peroxisom...    90   3e-20

>emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]
          Length = 904

 Score = 93.6 bits (231), Expect(2) = 3e-21
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = -2

Query: 146 VAALERKMQSAGMPPNVWKHA*RELRRLRKMQPQQPGYSSSRVYLELL 3
           VAALERKMQSAGMPPN+WKHA RELRRL+KMQPQQPGY+SSRVYLELL
Sbjct: 319 VAALERKMQSAGMPPNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELL 366



 Score = 33.1 bits (74), Expect(2) = 3e-21
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 226 QKEFLLLQQMSAIKEELG 173
           QKEFLL QQM AIKEELG
Sbjct: 293 QKEFLLRQQMRAIKEELG 310


>ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisomal [Vitis vinifera]
           gi|297742183|emb|CBI33970.3| unnamed protein product
           [Vitis vinifera]
          Length = 888

 Score = 93.6 bits (231), Expect(2) = 3e-21
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = -2

Query: 146 VAALERKMQSAGMPPNVWKHA*RELRRLRKMQPQQPGYSSSRVYLELL 3
           VAALERKMQSAGMPPN+WKHA RELRRL+KMQPQQPGY+SSRVYLELL
Sbjct: 303 VAALERKMQSAGMPPNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELL 350



 Score = 33.1 bits (74), Expect(2) = 3e-21
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 226 QKEFLLLQQMSAIKEELG 173
           QKEFLL QQM AIKEELG
Sbjct: 277 QKEFLLRQQMRAIKEELG 294


>ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|222870300|gb|EEF07431.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score = 90.5 bits (223), Expect(2) = 2e-20
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = -2

Query: 146 VAALERKMQSAGMPPNVWKHA*RELRRLRKMQPQQPGYSSSRVYLELL 3
           VAALERKMQSAGMP N+WKHA RELRRL+KMQPQQPGY+SSRVYLELL
Sbjct: 308 VAALERKMQSAGMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELL 355



 Score = 33.1 bits (74), Expect(2) = 2e-20
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 226 QKEFLLLQQMSAIKEELG 173
           QKEFLL QQM AIKEELG
Sbjct: 282 QKEFLLRQQMRAIKEELG 299


>ref|XP_002528799.1| ATP-dependent protease La, putative [Ricinus communis]
           gi|223531802|gb|EEF33621.1| ATP-dependent protease La,
           putative [Ricinus communis]
          Length = 890

 Score = 90.5 bits (223), Expect(2) = 2e-20
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = -2

Query: 146 VAALERKMQSAGMPPNVWKHA*RELRRLRKMQPQQPGYSSSRVYLELL 3
           VAALERKMQSAGMP N+WKHA RELRRL+KMQPQQPGY+SSRVYLELL
Sbjct: 305 VAALERKMQSAGMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELL 352



 Score = 33.1 bits (74), Expect(2) = 2e-20
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 226 QKEFLLLQQMSAIKEELG 173
           QKEFLL QQM AIKEELG
Sbjct: 279 QKEFLLRQQMRAIKEELG 296


>ref|XP_003578503.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Brachypodium
           distachyon]
          Length = 886

 Score = 90.1 bits (222), Expect(2) = 3e-20
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -2

Query: 146 VAALERKMQSAGMPPNVWKHA*RELRRLRKMQPQQPGYSSSRVYLELL 3
           VAALERKMQ+AGMP N+WKHA RELRRLRKMQPQQPGYSSSR YLELL
Sbjct: 304 VAALERKMQNAGMPANIWKHAQRELRRLRKMQPQQPGYSSSRAYLELL 351



 Score = 33.1 bits (74), Expect(2) = 3e-20
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 226 QKEFLLLQQMSAIKEELG 173
           QKEFLL QQM AIKEELG
Sbjct: 278 QKEFLLRQQMRAIKEELG 295


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