BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006594
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95213.1| unknown [Populus trichocarpa]                          193   1e-46
ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|2...   191   3e-46
gb|AFW79700.1| 50S ribosomal protein L3-2 [Zea mays]                  182   2e-43
gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]    182   2e-43
ref|NP_001130722.1| uncharacterized protein LOC100191826 [Zea ma...   182   2e-43

>gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  193 bits (490), Expect = 1e-46
 Identities = 91/113 (80%), Positives = 101/113 (89%)
 Frame = +3

Query: 681  DYDGSNVIKAAKSGIMTPKSRRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVTQTKT 860
            +Y   + I  AK G+MTP S+RTGV+AVKCGMTALWDKWGARIPITVLWVDDNIV+Q KT
Sbjct: 48   EYHQQSRIIEAKPGVMTPNSKRTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKT 107

Query: 861  LDKEVTTALQIGCGQKKEKHLTKPEVGHFRSQGVPMKRKLREFPVTEDALLPV 1019
            ++KE   ALQ+GCGQKKEKHLTKPEVGHFR+QGVPMKRKLREFPVTEDALLPV
Sbjct: 108  VEKEGFFALQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTEDALLPV 160


>ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1|
            predicted protein [Populus trichocarpa]
          Length = 320

 Score =  191 bits (486), Expect = 3e-46
 Identities = 92/115 (80%), Positives = 101/115 (87%)
 Frame = +3

Query: 675  EDDYDGSNVIKAAKSGIMTPKSRRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVTQT 854
            E  Y   + I  AK G+MTP S+RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIV+Q 
Sbjct: 51   EIQYQQPSRIIEAKPGVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQV 110

Query: 855  KTLDKEVTTALQIGCGQKKEKHLTKPEVGHFRSQGVPMKRKLREFPVTEDALLPV 1019
            KT++KE   ALQ+GCGQKKEKHLTKPEVGHFR+QGVPMKRKLREFPVTE+ALLPV
Sbjct: 111  KTVEKEGFFALQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTENALLPV 165


>gb|AFW79700.1| 50S ribosomal protein L3-2 [Zea mays]
          Length = 318

 Score =  182 bits (461), Expect = 2e-43
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = +3

Query: 690  GSNVIKAAKSGIMTPKSRRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVTQTKTLDK 869
            G   I  A+SG+M P SRRTGVI VKCGM+A+WDKWGA++PITVLWVDDN+VTQ KT +K
Sbjct: 53   GGGRIIEARSGVMGPTSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEK 112

Query: 870  EVTTALQIGCGQKKEKHLTKPEVGHFRSQGVPMKRKLREFPVTEDALLPV 1019
            E   ALQ+G GQKKEKHLTKPEVGHFR+QGVP+KRKLREFPVTEDALLPV
Sbjct: 113  EGFFALQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPV 162


>gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]
          Length = 328

 Score =  182 bits (461), Expect = 2e-43
 Identities = 86/109 (78%), Positives = 101/109 (92%)
 Frame = +3

Query: 693  SNVIKAAKSGIMTPKSRRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVTQTKTLDKE 872
            S++I+A K G M+  SRRTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIV+Q KT++KE
Sbjct: 63   SSIIEA-KPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKE 121

Query: 873  VTTALQIGCGQKKEKHLTKPEVGHFRSQGVPMKRKLREFPVTEDALLPV 1019
              TALQIGCGQKKEKHL+KPE+GHFR+QGVP+KRKL+EFPV++DALLPV
Sbjct: 122  GITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPV 170


>ref|NP_001130722.1| uncharacterized protein LOC100191826 [Zea mays]
            gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2
            [Zea mays]
          Length = 318

 Score =  182 bits (461), Expect = 2e-43
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = +3

Query: 690  GSNVIKAAKSGIMTPKSRRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVTQTKTLDK 869
            G   I  A+SG+M P SRRTGVI VKCGM+A+WDKWGA++PITVLWVDDN+VTQ KT +K
Sbjct: 53   GGGRIIEARSGVMGPTSRRTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEK 112

Query: 870  EVTTALQIGCGQKKEKHLTKPEVGHFRSQGVPMKRKLREFPVTEDALLPV 1019
            E   ALQ+G GQKKEKHLTKPEVGHFR+QGVP+KRKLREFPVTEDALLPV
Sbjct: 113  EGFFALQLGAGQKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPV 162