BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006588
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]                    464   e-128
ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   463   e-128
ref|XP_002509801.1| tubulin beta chain, putative [Ricinus commun...   463   e-128
ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa] gi...   463   e-128
ref|XP_002298036.1| tubulin, beta chain [Populus trichocarpa] gi...   462   e-128

>gb|AAN32988.1| beta-tubulin 1 [Gossypium hirsutum]
          Length = 444

 Score =  464 bits (1194), Expect = e-128
 Identities = 232/292 (79%), Positives = 236/292 (80%)
 Frame = +3

Query: 54  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           MREILH+QAGQCGNQIGGKFWEVVC+EHGIDA                            
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCDEHGIDATGNYVGTSPVQLERLNVY---------- 50

Query: 234 XXXXXXXXXXXXXXYNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG 413
                         YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYG++FRPDNFVFGQNG
Sbjct: 51  --------------YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGKLFRPDNFVFGQNG 96

Query: 414 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIR 593
           AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH              ISKIR
Sbjct: 97  AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIR 156

Query: 594 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 773
           EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216

Query: 774 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 929
           LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 217 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268


>ref|XP_002273514.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 444

 Score =  463 bits (1192), Expect = e-128
 Identities = 232/292 (79%), Positives = 235/292 (80%)
 Frame = +3

Query: 54  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           MREILHIQAGQCGNQIGGKFWEVVC+EHGID                             
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDTKGNYVGDSHLQLERVNVY---------- 50

Query: 234 XXXXXXXXXXXXXXYNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG 413
                         YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYG+IFRPDNFVFGQNG
Sbjct: 51  --------------YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNG 96

Query: 414 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIR 593
           AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH              ISKIR
Sbjct: 97  AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIR 156

Query: 594 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 773
           EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216

Query: 774 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 929
           LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 217 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268


>ref|XP_002509801.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549700|gb|EEF51188.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 445

 Score =  463 bits (1191), Expect = e-128
 Identities = 232/292 (79%), Positives = 235/292 (80%)
 Frame = +3

Query: 54  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           MREILHIQAGQCGNQIGGKFWEVVC+EHGID                             
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYVGNSHVQLERVNVY---------- 50

Query: 234 XXXXXXXXXXXXXXYNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG 413
                         YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYG+IFRPDNFVFGQNG
Sbjct: 51  --------------YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNG 96

Query: 414 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIR 593
           AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH              ISKIR
Sbjct: 97  AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIR 156

Query: 594 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 773
           EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216

Query: 774 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 929
           LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 217 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268


>ref|XP_002304492.1| tubulin, beta chain [Populus trichocarpa]
           gi|222841924|gb|EEE79471.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  463 bits (1191), Expect = e-128
 Identities = 232/292 (79%), Positives = 235/292 (80%)
 Frame = +3

Query: 54  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           MREILHIQAGQCGNQIGGKFWEVVC+EHGID                             
Sbjct: 1   MREILHIQAGQCGNQIGGKFWEVVCDEHGIDPTGNYTGNSHVQLERVNVY---------- 50

Query: 234 XXXXXXXXXXXXXXYNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG 413
                         YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYG+IFRPDNFVFGQNG
Sbjct: 51  --------------YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGKIFRPDNFVFGQNG 96

Query: 414 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIR 593
           AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH              ISKIR
Sbjct: 97  AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIR 156

Query: 594 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 773
           EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216

Query: 774 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 929
           LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 217 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268


>ref|XP_002298036.1| tubulin, beta chain [Populus trichocarpa]
           gi|222845294|gb|EEE82841.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 444

 Score =  462 bits (1189), Expect = e-128
 Identities = 231/292 (79%), Positives = 234/292 (80%)
 Frame = +3

Query: 54  MREILHIQAGQCGNQIGGKFWEVVCEEHGIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           MREILH+QAGQCGNQIGGKFWEVVC+EHGID                             
Sbjct: 1   MREILHVQAGQCGNQIGGKFWEVVCDEHGIDPTGNYAGNSNVQLERVNVY---------- 50

Query: 234 XXXXXXXXXXXXXXYNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG 413
                         YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG
Sbjct: 51  --------------YNEASGGRYVPRAVLMDLEPGTMDSLRTGPYGQIFRPDNFVFGQNG 96

Query: 414 AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIR 593
           AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQ+CH              ISKIR
Sbjct: 97  AGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIR 156

Query: 594 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 773
           EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK
Sbjct: 157 EEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLK 216

Query: 774 LTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 929
           LTNPSFGDLNHLIS TMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV
Sbjct: 217 LTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMV 268