BLASTX nr result

ID: Coptis23_contig00006581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006581
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPas...   284   6e-75
ref|XP_003538451.1| PREDICTED: probable 26S proteasome non-ATPas...   281   5e-74
ref|NP_001242871.1| uncharacterized protein LOC100815353 [Glycin...   281   5e-74
ref|XP_004137731.1| PREDICTED: probable 26S proteasome non-ATPas...   280   1e-73
ref|XP_002269668.1| PREDICTED: probable 26S proteasome non-ATPas...   278   3e-73

>ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7
           [Vitis vinifera] gi|297740235|emb|CBI30417.3| unnamed
           protein product [Vitis vinifera]
          Length = 310

 Score =  284 bits (727), Expect = 6e-75
 Identities = 135/143 (94%), Positives = 142/143 (99%)
 Frame = +1

Query: 139 MDVIKTQQISSRPVDKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 318
           MDVIKTQQISSRP++KV+VHPLVLLSIVDNYNRVA+DTRKRV+GVLLGSSFKGTVDVTNS
Sbjct: 1   MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVIGVLLGSSFKGTVDVTNS 60

Query: 319 YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 498
           YAVPFEE++KDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIH LFH
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFH 120

Query: 499 DYVPNPVLVIIDVQPKELGIPTK 567
           DYVPNPVLVIIDVQPKELGIPTK
Sbjct: 121 DYVPNPVLVIIDVQPKELGIPTK 143


>ref|XP_003538451.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           7-like [Glycine max]
          Length = 309

 Score =  281 bits (719), Expect = 5e-74
 Identities = 135/143 (94%), Positives = 142/143 (99%)
 Frame = +1

Query: 139 MDVIKTQQISSRPVDKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 318
           MDVIKTQQISSRP++KVVVHPLVLLSIVDNYNRVA+DTRKRVVGVLLGSSFKGTVDVTNS
Sbjct: 1   MDVIKTQQISSRPIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60

Query: 319 YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 498
           YAVPFEE++KDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIH LF+
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFN 120

Query: 499 DYVPNPVLVIIDVQPKELGIPTK 567
           DYVPNPVLVIIDV+PKELGIPTK
Sbjct: 121 DYVPNPVLVIIDVEPKELGIPTK 143


>ref|NP_001242871.1| uncharacterized protein LOC100815353 [Glycine max]
           gi|255644953|gb|ACU22976.1| unknown [Glycine max]
          Length = 309

 Score =  281 bits (719), Expect = 5e-74
 Identities = 135/143 (94%), Positives = 142/143 (99%)
 Frame = +1

Query: 139 MDVIKTQQISSRPVDKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 318
           MDVIKTQQISSRP++KVVVHPLVLLSIVDNYNRVA+DTRKRVVGVLLGSSFKGTVDVTNS
Sbjct: 1   MDVIKTQQISSRPIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNS 60

Query: 319 YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 498
           YAVPFEE++KDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIH LF+
Sbjct: 61  YAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFN 120

Query: 499 DYVPNPVLVIIDVQPKELGIPTK 567
           DYVPNPVLVIIDV+PKELGIPTK
Sbjct: 121 DYVPNPVLVIIDVEPKELGIPTK 143


>ref|XP_004137731.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
           7-like [Cucumis sativus]
           gi|449483466|ref|XP_004156600.1| PREDICTED: probable 26S
           proteasome non-ATPase regulatory subunit 7-like [Cucumis
           sativus]
          Length = 310

 Score =  280 bits (716), Expect = 1e-73
 Identities = 134/143 (93%), Positives = 142/143 (99%)
 Frame = +1

Query: 139 MDVIKTQQISSRPVDKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 318
           MDVIKTQQISSRPV+KVVVHPLVLLSIVDNYNRVA+D+RKRVVGVLLGSSFKGTVDV+NS
Sbjct: 1   MDVIKTQQISSRPVEKVVVHPLVLLSIVDNYNRVAKDSRKRVVGVLLGSSFKGTVDVSNS 60

Query: 319 YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 498
           YAVPFEE+EKDPSIWFLDHNYHESMFSMFKRINAKEH+VGWYSTGPKLRENDLDIH+LFH
Sbjct: 61  YAVPFEEDEKDPSIWFLDHNYHESMFSMFKRINAKEHIVGWYSTGPKLRENDLDIHQLFH 120

Query: 499 DYVPNPVLVIIDVQPKELGIPTK 567
           DY+ NPVLVIIDVQPKELGIPTK
Sbjct: 121 DYLSNPVLVIIDVQPKELGIPTK 143


>ref|XP_002269668.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7
           [Vitis vinifera] gi|297742338|emb|CBI34487.3| unnamed
           protein product [Vitis vinifera]
          Length = 310

 Score =  278 bits (712), Expect = 3e-73
 Identities = 133/143 (93%), Positives = 141/143 (98%)
 Frame = +1

Query: 139 MDVIKTQQISSRPVDKVVVHPLVLLSIVDNYNRVARDTRKRVVGVLLGSSFKGTVDVTNS 318
           MDVIKTQQISSRP++KV+VHPLVLLSIVDNYNRVA+DT KRV+GVLLGSSFKGTVDVTNS
Sbjct: 1   MDVIKTQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTHKRVIGVLLGSSFKGTVDVTNS 60

Query: 319 YAVPFEEEEKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 498
           YAVPFEE++KDPSI FLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH
Sbjct: 61  YAVPFEEDDKDPSICFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFH 120

Query: 499 DYVPNPVLVIIDVQPKELGIPTK 567
           +YVPNPVLVIIDVQPKELGIPTK
Sbjct: 121 EYVPNPVLVIIDVQPKELGIPTK 143


Top