BLASTX nr result

ID: Coptis23_contig00006580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006580
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPas...   213   2e-53
gb|ABB02648.1| unknown [Solanum tuberosum]                            212   7e-53
gb|ACF06631.1| 26S proteasome regulatory particle non-ATPase sub...   212   7e-53
ref|NP_001142646.1| uncharacterized protein LOC100274928 [Zea ma...   210   2e-52
ref|NP_001143713.1| uncharacterized protein LOC100276453 [Zea ma...   209   6e-52

>ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7
           [Vitis vinifera] gi|297740235|emb|CBI30417.3| unnamed
           protein product [Vitis vinifera]
          Length = 310

 Score =  213 bits (543), Expect = 2e-53
 Identities = 117/146 (80%), Positives = 120/146 (82%)
 Frame = -1

Query: 694 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVXXXXXX 515
           IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREI+ YLDLV      
Sbjct: 170 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIRGYLDLVV----- 224

Query: 514 XXXXXXXXXXXXXXXXXXDGKLPINHEILCHLQDVFNLLPNLNVAELIKAFSVKTNDMML 335
                             DGKLP+NHEIL HLQDVFNLLPNLNVAELIKAF+VKTNDMML
Sbjct: 225 ------------------DGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFAVKTNDMML 266

Query: 334 VIYLSSLIRSVIALHNLINNKMLNKE 257
           VIYLSSLIRSVIALHNLINNKMLNKE
Sbjct: 267 VIYLSSLIRSVIALHNLINNKMLNKE 292


>gb|ABB02648.1| unknown [Solanum tuberosum]
          Length = 309

 Score =  212 bits (539), Expect = 7e-53
 Identities = 115/146 (78%), Positives = 121/146 (82%)
 Frame = -1

Query: 694 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVXXXXXX 515
           IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARL+EI+SYLD+V      
Sbjct: 169 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLQEIRSYLDVVI----- 223

Query: 514 XXXXXXXXXXXXXXXXXXDGKLPINHEILCHLQDVFNLLPNLNVAELIKAFSVKTNDMML 335
                             DGKLP+NHEIL HLQDVFNLLPNLNVAEL+K+FSVKTNDMML
Sbjct: 224 ------------------DGKLPLNHEILYHLQDVFNLLPNLNVAELVKSFSVKTNDMML 265

Query: 334 VIYLSSLIRSVIALHNLINNKMLNKE 257
           VIYLSSLIRSVIALHNLINNKMLNKE
Sbjct: 266 VIYLSSLIRSVIALHNLINNKMLNKE 291


>gb|ACF06631.1| 26S proteasome regulatory particle non-ATPase subunit 8 [Elaeis
           guineensis]
          Length = 310

 Score =  212 bits (539), Expect = 7e-53
 Identities = 115/146 (78%), Positives = 120/146 (82%)
 Frame = -1

Query: 694 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVXXXXXX 515
           IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREI+ YLDLV      
Sbjct: 170 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIRGYLDLVI----- 224

Query: 514 XXXXXXXXXXXXXXXXXXDGKLPINHEILCHLQDVFNLLPNLNVAELIKAFSVKTNDMML 335
                             DGKLP+NHEIL HLQDVFNLLPNLNV+EL+KAF+VKTNDMML
Sbjct: 225 ------------------DGKLPLNHEILYHLQDVFNLLPNLNVSELVKAFAVKTNDMML 266

Query: 334 VIYLSSLIRSVIALHNLINNKMLNKE 257
           VIYLSSLIRSVIALHNLINNKMLNKE
Sbjct: 267 VIYLSSLIRSVIALHNLINNKMLNKE 292


>ref|NP_001142646.1| uncharacterized protein LOC100274928 [Zea mays]
           gi|242074672|ref|XP_002447272.1| hypothetical protein
           SORBIDRAFT_06g031700 [Sorghum bicolor]
           gi|194701744|gb|ACF84956.1| unknown [Zea mays]
           gi|195607808|gb|ACG25734.1| hypothetical protein [Zea
           mays] gi|195624790|gb|ACG34225.1| hypothetical protein
           [Zea mays] gi|241938455|gb|EES11600.1| hypothetical
           protein SORBIDRAFT_06g031700 [Sorghum bicolor]
           gi|414584968|tpg|DAA35539.1| TPA: hypothetical protein
           ZEAMMB73_768086 [Zea mays]
          Length = 310

 Score =  210 bits (535), Expect = 2e-52
 Identities = 116/146 (79%), Positives = 119/146 (81%)
 Frame = -1

Query: 694 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVXXXXXX 515
           IAAHEVEEIGVEHLLRDVKDTTISTLATEVT KLAALKGLDARLREI+SYLDLV      
Sbjct: 170 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTSKLAALKGLDARLREIRSYLDLVI----- 224

Query: 514 XXXXXXXXXXXXXXXXXXDGKLPINHEILCHLQDVFNLLPNLNVAELIKAFSVKTNDMML 335
                             DGKLP+NHEIL HLQDVFNLLPNLNV ELIKAF+VKTNDMML
Sbjct: 225 ------------------DGKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMML 266

Query: 334 VIYLSSLIRSVIALHNLINNKMLNKE 257
           VIYLSSLIRSVIALHNLINNKMLNKE
Sbjct: 267 VIYLSSLIRSVIALHNLINNKMLNKE 292


>ref|NP_001143713.1| uncharacterized protein LOC100276453 [Zea mays]
           gi|194702482|gb|ACF85325.1| unknown [Zea mays]
           gi|195625296|gb|ACG34478.1| hypothetical protein [Zea
           mays] gi|413919821|gb|AFW59753.1| hypothetical protein
           ZEAMMB73_301082 [Zea mays]
          Length = 314

 Score =  209 bits (531), Expect = 6e-52
 Identities = 115/146 (78%), Positives = 119/146 (81%)
 Frame = -1

Query: 694 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTGKLAALKGLDARLREIKSYLDLVXXXXXX 515
           IAAHEVEEIGVEHLLRDVKDTTISTLATEVT KLAALKGLDARLREI+SYLDLV      
Sbjct: 170 IAAHEVEEIGVEHLLRDVKDTTISTLATEVTSKLAALKGLDARLREIRSYLDLVI----- 224

Query: 514 XXXXXXXXXXXXXXXXXXDGKLPINHEILCHLQDVFNLLPNLNVAELIKAFSVKTNDMML 335
                             +GKLP+NHEIL HLQDVFNLLPNLNV ELIKAF+VKTNDMML
Sbjct: 225 ------------------EGKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMML 266

Query: 334 VIYLSSLIRSVIALHNLINNKMLNKE 257
           VIYLSSLIRSVIALHNLINNKMLNKE
Sbjct: 267 VIYLSSLIRSVIALHNLINNKMLNKE 292


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