BLASTX nr result

ID: Coptis23_contig00006577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006577
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267243.1| PREDICTED: protein grpE-like [Vitis vinifera]     329   1e-87
ref|XP_002530954.1| Protein grpE, putative [Ricinus communis] gi...   323   5e-86
ref|XP_003624768.1| Protein grpE [Medicago truncatula] gi|355499...   320   6e-85
ref|XP_003520909.1| PREDICTED: protein grpE-like [Glycine max]        316   8e-84
ref|XP_003554067.1| PREDICTED: protein grpE-like [Glycine max]        315   1e-83

>ref|XP_002267243.1| PREDICTED: protein grpE-like [Vitis vinifera]
          Length = 338

 Score =  329 bits (843), Expect = 1e-87
 Identities = 184/321 (57%), Positives = 229/321 (71%), Gaps = 11/321 (3%)
 Frame = +2

Query: 56  SSVLSSNFGCKPVRSL--IVNSSPINNLVFLKSFR-GFSRPLQLRTSRPCPSSRKSFL-- 220
           +++L + F   P +SL  I   SP       K+F    +R   L  SR   S R S +  
Sbjct: 2   ATLLRAPFTAPPPQSLTSICTQSP-------KAFHLPLTRRCALNASRLTSSLRFSPILH 54

Query: 221 VRVSTEDPLIGNEVDLEAETVSDQ------DSIKGNSEDEDSTEDSNVDDIANAEEKPIS 382
           +R    DP   N    E + V D       D   G +ED  S  D+   D  NAEE+P S
Sbjct: 55  IRFLRFDPFASNGEATETQEVQDSEIEENSDGYIGGAEDATSDSDAPDSDAPNAEEEPAS 114

Query: 383 PIMISLELYKEALLNNEESKVAEVEYSLLSMEDEKKSLANEVASMSDELSSLKDKVLRIS 562
            I+++L  YKEAL++N+ESK AE+E  +  +EDEK  L  +VA++S+ELSS K+++LRIS
Sbjct: 115 GIIVALRSYKEALVSNDESKAAEIEAFIKFIEDEKIDLEKKVAALSEELSSDKERILRIS 174

Query: 563 ADFDNYRKRTERDRLSLVTNVQGEVVENLLPVLDNFERAKSQIKLETDGEEKISNSYQSI 742
           ADFDN+RKRT+R+RLSLVTN QGEV+ENLLPVLDNFERAK+QIK+ET+GEEKI+NSYQSI
Sbjct: 175 ADFDNFRKRTDRERLSLVTNAQGEVLENLLPVLDNFERAKAQIKVETEGEEKINNSYQSI 234

Query: 743 YKQFVEILASLGVVSVETVGSPFDPMMHEAIMREDSSEFEEGIVLQEFRKGFKLGDRLLR 922
           YKQFVEIL SLGV  VET+G+PFDP+ HEAIMREDS+EFEE +++QEFRKGFKLGDRLLR
Sbjct: 235 YKQFVEILGSLGVTPVETIGNPFDPLFHEAIMREDSTEFEEDVIIQEFRKGFKLGDRLLR 294

Query: 923 PSMVKVSAGPGPAKPEGIGPS 985
           PSMVKVSAGPGPAK E +G S
Sbjct: 295 PSMVKVSAGPGPAKAEAVGSS 315


>ref|XP_002530954.1| Protein grpE, putative [Ricinus communis] gi|223529469|gb|EEF31426.1|
            Protein grpE, putative [Ricinus communis]
          Length = 356

 Score =  323 bits (829), Expect = 5e-86
 Identities = 172/262 (65%), Positives = 208/262 (79%), Gaps = 14/262 (5%)
 Frame = +2

Query: 275  ETVSD---QDSIKGNSEDEDST-----------EDSNVDDIANAEEKPISPIMISLELYK 412
            ETV +   QDS  G  E ED             E ++ +++A+ EE   S I+ SL  Y+
Sbjct: 85   ETVQEPEIQDSSDGAVEVEDGAGEVEGGVGEVEEITSGEEVADVEETTSSIILTSLRSYR 144

Query: 413  EALLNNEESKVAEVEYSLLSMEDEKKSLANEVASMSDELSSLKDKVLRISADFDNYRKRT 592
            EAL +N+E+++AE+E  L S+EDEK  L  +VAS+ +ELS+ KD+VLRISADFDN+RKRT
Sbjct: 145  EALASNDEARIAEIEAFLKSVEDEKNDLGRKVASLIEELSTEKDRVLRISADFDNFRKRT 204

Query: 593  ERDRLSLVTNVQGEVVENLLPVLDNFERAKSQIKLETDGEEKISNSYQSIYKQFVEILAS 772
            +R+RLSLV+N QGEVVENLLPVLDNFERAK+QIKLET+GEEKI+NSYQSIYKQFVEIL S
Sbjct: 205  DRERLSLVSNAQGEVVENLLPVLDNFERAKAQIKLETEGEEKINNSYQSIYKQFVEILGS 264

Query: 773  LGVVSVETVGSPFDPMMHEAIMREDSSEFEEGIVLQEFRKGFKLGDRLLRPSMVKVSAGP 952
            LGVV VET+G+PFDP++HEAIMREDS+EFEEGI+LQEFRKGFKLGDRLLRPSMVKVSAGP
Sbjct: 265  LGVVPVETIGNPFDPLLHEAIMREDSTEFEEGIILQEFRKGFKLGDRLLRPSMVKVSAGP 324

Query: 953  GPAKPEGIGPSGGVEAGIDTSE 1018
            GPAKPE    S  VE   +TS+
Sbjct: 325  GPAKPEQAESSAEVETAGETSQ 346


>ref|XP_003624768.1| Protein grpE [Medicago truncatula] gi|355499783|gb|AES80986.1|
           Protein grpE [Medicago truncatula]
          Length = 335

 Score =  320 bits (820), Expect = 6e-85
 Identities = 167/242 (69%), Positives = 199/242 (82%), Gaps = 6/242 (2%)
 Frame = +2

Query: 263 DLEAETVSDQ------DSIKGNSEDEDSTEDSNVDDIANAEEKPISPIMISLELYKEALL 424
           D EA  V D       DS  G ++ E+ST D   D++++A E P SP+++ L+ YKEAL 
Sbjct: 68  DTEAPQVQDSPEVQVLDSTDGAADVEESTGD---DEVSDAGEIPASPLIVLLQSYKEALA 124

Query: 425 NNEESKVAEVEYSLLSMEDEKKSLANEVASMSDELSSLKDKVLRISADFDNYRKRTERDR 604
           NN+  KVAE+E SL S++DE   L  ++AS+S+ELS  KD+ LRI ADFDNYRKRT+RDR
Sbjct: 125 NNDSVKVAELESSLKSIDDEIVGLEGKIASLSEELSIEKDRKLRIGADFDNYRKRTDRDR 184

Query: 605 LSLVTNVQGEVVENLLPVLDNFERAKSQIKLETDGEEKISNSYQSIYKQFVEILASLGVV 784
           LSLVTN QGEVVE+LLPVLDNFERAK+QIK+ET+GEEKI+NSYQSIYKQF+EIL SLGV 
Sbjct: 185 LSLVTNAQGEVVESLLPVLDNFERAKAQIKVETEGEEKINNSYQSIYKQFIEILNSLGVE 244

Query: 785 SVETVGSPFDPMMHEAIMREDSSEFEEGIVLQEFRKGFKLGDRLLRPSMVKVSAGPGPAK 964
            V+TVG+PFDPM+HEAIMREDS EFE+GI+LQEFRKGFKLGDRLLRPSMVKVSAGPGPAK
Sbjct: 245 PVDTVGNPFDPMLHEAIMREDSDEFEDGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAK 304

Query: 965 PE 970
           PE
Sbjct: 305 PE 306


>ref|XP_003520909.1| PREDICTED: protein grpE-like [Glycine max]
          Length = 335

 Score =  316 bits (810), Expect = 8e-84
 Identities = 180/315 (57%), Positives = 223/315 (70%), Gaps = 14/315 (4%)
 Frame = +2

Query: 116  SPINNLVFLKSFRGFS----RPLQLRTSRPCPSSRKSFLVRV-------STEDPLIGNEV 262
            SP ++   + SFR  +    +P  L +S P P+      VR         TE P +    
Sbjct: 21   SPKSSRFAVVSFRQSTTCGRKPSSLLSSLPFPNVPSLRFVRFVPFAFDGDTEAPQVQEP- 79

Query: 263  DLEAETVSDQDSIKGNSEDEDSTEDSNVDDIANAEEKPISPIMISLELYKEALLNNEESK 442
              E + +   D   G +   DS  D+ V D   A+E   SP ++ L+ YKEAL NN+E K
Sbjct: 80   --EVQVLDPSDGAVGVN---DSASDNEVSD---ADETFASPFLLLLQSYKEALANNDEVK 131

Query: 443  VAEVEYSLLSMEDEKKSLANEVASMSDELSSLKDKVLRISADFDNYRKRTERDRLSLVTN 622
            +AE+E SL S+EDEK  L  ++AS+S+ELS  KD++LRISADFDN+RKRTERDRLSLVTN
Sbjct: 132  IAELESSLKSVEDEKIELEVKIASLSEELSVEKDRILRISADFDNFRKRTERDRLSLVTN 191

Query: 623  VQGEVVENLLPVLDNFERAKSQIKLETDGEEKISNSYQSIYKQFVEILASLGVVSVETVG 802
             QGEVVE+LLPVLDNF+RAK+QIK+ET+GEEKI+NSYQSIYKQF+EIL SLGV  VETVG
Sbjct: 192  AQGEVVESLLPVLDNFDRAKTQIKVETEGEEKINNSYQSIYKQFIEILNSLGVEPVETVG 251

Query: 803  SPFDPMMHEAIMREDSSEFEEGIVLQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEGIGP 982
            +PFDP++HEAIMREDS EFE+GI++QEFRKGFKLG+RLLRPSMVKVSAGPGPAKPE   P
Sbjct: 252  TPFDPLLHEAIMREDSDEFEDGIIIQEFRKGFKLGERLLRPSMVKVSAGPGPAKPEQEAP 311

Query: 983  S---GGVEAGIDTSE 1018
                G  E   D+ +
Sbjct: 312  QEEHGNTEISEDSKQ 326


>ref|XP_003554067.1| PREDICTED: protein grpE-like [Glycine max]
          Length = 338

 Score =  315 bits (808), Expect = 1e-83
 Identities = 166/237 (70%), Positives = 196/237 (82%)
 Frame = +2

Query: 323  DSTEDSNVDDIANAEEKPISPIMISLELYKEALLNNEESKVAEVEYSLLSMEDEKKSLAN 502
            DS  D+ V D   A+E   SP ++ L+ Y+EAL NN+E K+AE+E SL S+EDEK  L  
Sbjct: 97   DSASDNEVSD---ADETFASPFLVILQSYREALANNDEVKIAELESSLKSIEDEKIELEG 153

Query: 503  EVASMSDELSSLKDKVLRISADFDNYRKRTERDRLSLVTNVQGEVVENLLPVLDNFERAK 682
            ++AS+S+ELS  KD++LRISADFDN+RKRTERDRLSLVTN QGEVVE+LLPVLDNFERAK
Sbjct: 154  KIASLSEELSIEKDRILRISADFDNFRKRTERDRLSLVTNAQGEVVESLLPVLDNFERAK 213

Query: 683  SQIKLETDGEEKISNSYQSIYKQFVEILASLGVVSVETVGSPFDPMMHEAIMREDSSEFE 862
            +QIK+ET+GEEKI+NSYQSIYKQF EIL SLGV  VETVG+PFDP++HEAIMREDS EFE
Sbjct: 214  TQIKVETEGEEKINNSYQSIYKQFNEILTSLGVEPVETVGTPFDPLLHEAIMREDSDEFE 273

Query: 863  EGIVLQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEGIGPSGGVEAGIDTSEIRESS 1033
            +GI++QEFRKGFKLGDRLLRPSMVKVSAGPGPAKPE   P    E  ++T EI E S
Sbjct: 274  DGIIIQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQEAPQ---EEQVNT-EISEDS 326


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