BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006576
         (1850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   544   e-152
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              544   e-152
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   520   e-145
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   511   e-142
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...   501   e-139

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  544 bits (1401), Expect = e-152
 Identities = 284/390 (72%), Positives = 312/390 (80%), Gaps = 3/390 (0%)
 Frame = +2

Query: 287  QRTVFAYQISLKADEKDVFQFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 466
            QRTVFAYQI LKADE+DV++FFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAI
Sbjct: 218  QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 277

Query: 467  ALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXXX-ARRLYVGNLHFNITED 643
            ALSGQ LLG PVMVKPSEAEKNLVQSTTA               ARRLYVGNLHFNITED
Sbjct: 278  ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 337

Query: 644  QLRQVFEPFGAVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQNLNGQLDIAGRTIKVS 820
            QLRQVFEPFG VELVQLP D E+GHCKGFGFVQFARLEDAR AQ+LNGQLDIAGRTIKVS
Sbjct: 338  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 397

Query: 821  AVSDQVGMQEIGVNAXXXXXXXXXXMSLNARSRAILMQKLDRSGVVSSITGSMVTPVLNG 1000
             V+DQ G+Q+IG NA          +SLNARSRAILMQKLDRSG    I GS+ +PVLN 
Sbjct: 398  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 457

Query: 1001 SSLPLATATVPGM-PSTIPIVXXXXXXXXXXXXXXXXSSFGVPTVTATSIDPIGIPSECL 1177
              LPL+TA + G  P   P+V                +   VP VT  SID IG+PSECL
Sbjct: 458  PGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECL 517

Query: 1178 LLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSAGFVYLRFDNTQSAMNA 1357
            +LK+MFDP +ETEPDFDLDIKEDVQ ECSKFG VKHIYVDK+SAGFV+LRF+NTQ+A++A
Sbjct: 518  MLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 577

Query: 1358 QRALHGRWFAGKMITASYMVPQNYEAKFPD 1447
            QRALHGRWFAGKMITA++M+PQNYEAKFPD
Sbjct: 578  QRALHGRWFAGKMITATFMLPQNYEAKFPD 607


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  544 bits (1401), Expect = e-152
 Identities = 284/390 (72%), Positives = 312/390 (80%), Gaps = 3/390 (0%)
 Frame = +2

Query: 287  QRTVFAYQISLKADEKDVFQFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 466
            QRTVFAYQI LKADE+DV++FFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAI
Sbjct: 36   QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 95

Query: 467  ALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXXX-ARRLYVGNLHFNITED 643
            ALSGQ LLG PVMVKPSEAEKNLVQSTTA               ARRLYVGNLHFNITED
Sbjct: 96   ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITED 155

Query: 644  QLRQVFEPFGAVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQNLNGQLDIAGRTIKVS 820
            QLRQVFEPFG VELVQLP D E+GHCKGFGFVQFARLEDAR AQ+LNGQLDIAGRTIKVS
Sbjct: 156  QLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVS 215

Query: 821  AVSDQVGMQEIGVNAXXXXXXXXXXMSLNARSRAILMQKLDRSGVVSSITGSMVTPVLNG 1000
             V+DQ G+Q+IG NA          +SLNARSRAILMQKLDRSG    I GS+ +PVLN 
Sbjct: 216  VVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNN 275

Query: 1001 SSLPLATATVPGM-PSTIPIVXXXXXXXXXXXXXXXXSSFGVPTVTATSIDPIGIPSECL 1177
              LPL+TA + G  P   P+V                +   VP VT  SID IG+PSECL
Sbjct: 276  PGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECL 335

Query: 1178 LLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSAGFVYLRFDNTQSAMNA 1357
            +LK+MFDP +ETEPDFDLDIKEDVQ ECSKFG VKHIYVDK+SAGFV+LRF+NTQ+A++A
Sbjct: 336  MLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISA 395

Query: 1358 QRALHGRWFAGKMITASYMVPQNYEAKFPD 1447
            QRALHGRWFAGKMITA++M+PQNYEAKFPD
Sbjct: 396  QRALHGRWFAGKMITATFMLPQNYEAKFPD 425


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
            gi|223544486|gb|EEF46005.1| splicing factor, putative
            [Ricinus communis]
          Length = 609

 Score =  520 bits (1338), Expect = e-145
 Identities = 279/390 (71%), Positives = 306/390 (78%), Gaps = 3/390 (0%)
 Frame = +2

Query: 287  QRTVFAYQISLKADEKDVFQFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 466
            QRTVFAYQI LKADE+DV++FFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI
Sbjct: 225  QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284

Query: 467  ALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXXXARRLYVGNLHFNITEDQ 646
            ALSGQ LLG PVMVKPSEAEKNLVQSTT V             ARRLYVGNLHFNITEDQ
Sbjct: 285  ALSGQPLLGQPVMVKPSEAEKNLVQSTTTV---NAGSGPYSGGARRLYVGNLHFNITEDQ 341

Query: 647  LRQVFEPFGAVELVQLPLDESGHCKGFGFVQFARLEDARNAQNLNGQLDIAGRTIKVSAV 826
            LRQVFEPFG VELVQLPLDE+GHCKGFGFVQFARLEDA+NA NLNGQ++IAGR IKVS V
Sbjct: 342  LRQVFEPFGIVELVQLPLDETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKVSTV 401

Query: 827  SDQVGMQEIGVNAXXXXXXXXXXMSLNARSRAILMQKLDRSGVVSSITGSMVTPVLNGSS 1006
            +DQ GMQ+   NA          ++LNARSRAILMQKLDRSG  SSI GS+ T   + +S
Sbjct: 402  TDQTGMQDSTTNAGDFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGT---SAAS 458

Query: 1007 LPLATATVP---GMPSTIPIVXXXXXXXXXXXXXXXXSSFGVPTVTATSIDPIGIPSECL 1177
              LA  T P     P   PIV                +S  +P     S+D IG+PSECL
Sbjct: 459  TGLAVPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPG-AIPSVDTIGVPSECL 517

Query: 1178 LLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSAGFVYLRFDNTQSAMNA 1357
            LLK+MFDPSIETEPDFDLDIKEDVQ ECSKFG ++HIYVDK+SAGFVYLRF+NTQSA++A
Sbjct: 518  LLKNMFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISA 577

Query: 1358 QRALHGRWFAGKMITASYMVPQNYEAKFPD 1447
            QRALHGRWFAGKMITA++MVPQ YE KFPD
Sbjct: 578  QRALHGRWFAGKMITATFMVPQVYETKFPD 607


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  511 bits (1317), Expect = e-142
 Identities = 275/395 (69%), Positives = 306/395 (77%), Gaps = 8/395 (2%)
 Frame = +2

Query: 287  QRTVFAYQISLKADEKDVFQFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 466
            QRTVFAYQISLKADE+DV++FFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI
Sbjct: 222  QRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 281

Query: 467  ALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXXX-ARRLYVGNLHFNITED 643
            ALSGQ LLG PVMVKPSEAEKNLVQSTT+V              AR+LYVGNLH +ITE 
Sbjct: 282  ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEA 341

Query: 644  QLRQVFEPFGAVELVQLPLDESGHCKGFGFVQFARLEDARNAQNLNGQLDIAGRTIKVSA 823
             +R+VFE FG VELVQLPLDESGHCKGFGFVQFARLEDARNAQ+LNGQL+I GRTIKVSA
Sbjct: 342  DIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSA 401

Query: 824  VSDQVGMQEIGVNAXXXXXXXXXXMSLNARSRAILMQKLDRSGVVSSITGSMVTPVLN-- 997
            V+DQ GMQE+G N           +SLNA SRAILMQKLDRSG  SS+ GS+    +N  
Sbjct: 402  VTDQSGMQEVGGNTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNT 461

Query: 998  GSSLP-----LATATVPGMPSTIPIVXXXXXXXXXXXXXXXXSSFGVPTVTATSIDPIGI 1162
            G +LP     LA A V G+                           +PT T  SIDPIG+
Sbjct: 462  GLNLPATGNILAAAPVGGLAG---------------------GGLQIPTATIPSIDPIGV 500

Query: 1163 PSECLLLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSAGFVYLRFDNTQ 1342
            PSECL+LK+MFDP  ETEPDFDLDIKEDV+AECSKFG +KHIYVDK SAGFVYLRF++TQ
Sbjct: 501  PSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKSAGFVYLRFEDTQ 560

Query: 1343 SAMNAQRALHGRWFAGKMITASYMVPQNYEAKFPD 1447
            SA++AQ+ALHGRWFAGKMITAS+MVPQ+YE KFPD
Sbjct: 561  SAISAQQALHGRWFAGKMITASFMVPQSYEDKFPD 595


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score =  501 bits (1291), Expect = e-139
 Identities = 268/388 (69%), Positives = 299/388 (77%), Gaps = 1/388 (0%)
 Frame = +2

Query: 287  QRTVFAYQISLKADEKDVFQFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 466
            QR VFAYQISLKADE+DVF+FFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI
Sbjct: 225  QRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284

Query: 467  ALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXXX-ARRLYVGNLHFNITED 643
            ALSGQ LLG PVMVKPSEAEKNLVQSTT+V              AR+LYVGNLH +ITE 
Sbjct: 285  ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEA 344

Query: 644  QLRQVFEPFGAVELVQLPLDESGHCKGFGFVQFARLEDARNAQNLNGQLDIAGRTIKVSA 823
             +R+VFE FG VELVQLPLDESGHCKGFGFVQFARLEDARNAQ+LNGQL+I GRTIKVSA
Sbjct: 345  DIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSA 404

Query: 824  VSDQVGMQEIGVNAXXXXXXXXXXMSLNARSRAILMQKLDRSGVVSSITGSMVTPVLNGS 1003
            V+DQ GMQE G N           MSLNA SRA+LMQKLDRSG  SS+ GS+   V+N +
Sbjct: 405  VTDQSGMQEFGGNTGDFDDDEGGGMSLNACSRAMLMQKLDRSGTASSMVGSLGNSVVNNT 464

Query: 1004 SLPLATATVPGMPSTIPIVXXXXXXXXXXXXXXXXSSFGVPTVTATSIDPIGIPSECLLL 1183
             L         +P+T  I+                    +PT T  SID IG+ SECL+L
Sbjct: 465  GL--------NLPATGNIL------AAAPVGELAGGGLQIPTATIPSIDTIGVASECLML 510

Query: 1184 KDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSAGFVYLRFDNTQSAMNAQR 1363
            K+MFDP  E EPDFDLDIKEDV+AECSK G +KHIYVDK SAGFVYLRF++TQSA++AQ+
Sbjct: 511  KNMFDPKDEIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSAGFVYLRFEDTQSAISAQQ 570

Query: 1364 ALHGRWFAGKMITASYMVPQNYEAKFPD 1447
            ALHGRWFAGKMITAS+MVPQ+YE KFPD
Sbjct: 571  ALHGRWFAGKMITASFMVPQSYEDKFPD 598