BLASTX nr result

ID: Coptis23_contig00006570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006570
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255...   392   e-113
emb|CBI37413.3| unnamed protein product [Vitis vinifera]              392   e-113
ref|XP_002519960.1| protein with unknown function [Ricinus commu...   390   e-113
ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   380   e-111
emb|CBI26560.3| unnamed protein product [Vitis vinifera]              380   e-111

>ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
          Length = 1789

 Score =  392 bits (1006), Expect(2) = e-113
 Identities = 195/283 (68%), Positives = 220/283 (77%)
 Frame = -3

Query: 1099 FLWGAHPDEKLSQFPLPTHDVVLRYGAPSEFKQRNTVAYDQGQPRDLEKAVLLRDALSDL 920
            FLWGAHP E L QFPLPTHDVV +Y  PSEF + N VAYD+GQPR+LEKAV+LRDA+SDL
Sbjct: 1506 FLWGAHPGESLPQFPLPTHDVVAKYWPPSEF-ECNIVAYDEGQPRELEKAVVLRDAISDL 1564

Query: 919  PDVTNHEVREEMPYEKLPETEFQIYIRSSKYDMMCSSTDGAKKSKKPVLYDHRPLPLNED 740
            P VTN+E R+EM Y K PETEFQ YIRS+K  M  SS+ G  K    +LYDHRP PLNED
Sbjct: 1565 PAVTNYETRDEMLYGKPPETEFQKYIRSTKDAMAGSSSSGITKGYNSILYDHRPYPLNED 1624

Query: 739  NISRVCQIPQRKGANFRDLPGVIVGPDNVAQLDPNMKRLLLPSGNPLVPDFVLTYEAGKS 560
            N  R+CQIP+RKGANFRDL GVIVG DNVA  DP MK +LLPSG+PLVPD V +YE GKS
Sbjct: 1625 NYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLPSGHPLVPDCVFSYEQGKS 1684

Query: 559  RRPYARLWWDETVPTIMTTPNPRNLVMLHPEQDRVLTIRECARLQGFPDYYKFFGSVTDR 380
            +RP+ARLWWDETVPT++T P  RN  +LHPEQDRVLTIRECARLQGFPDYY+F G+V +R
Sbjct: 1685 KRPFARLWWDETVPTVLTFPYLRNQAILHPEQDRVLTIRECARLQGFPDYYRFRGTVKER 1744

Query: 379  YRQIGNAVAVPVSRALGYALGMACXXXXXXXXXXXXXPKFSHS 251
            Y QIGNAVA PV+RALGY LGMA               KFSHS
Sbjct: 1745 YCQIGNAVAFPVARALGYMLGMAFQNQSGNEALATLPLKFSHS 1787



 Score = 46.2 bits (108), Expect(2) = e-113
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -2

Query: 1160 ARLGIMAAGCYGLPQFRLRVFFMG 1089
            ARLG++AAGCYGLPQFRLRVF  G
Sbjct: 1486 ARLGMIAAGCYGLPQFRLRVFLWG 1509


>emb|CBI37413.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  392 bits (1006), Expect(2) = e-113
 Identities = 195/283 (68%), Positives = 220/283 (77%)
 Frame = -3

Query: 1099 FLWGAHPDEKLSQFPLPTHDVVLRYGAPSEFKQRNTVAYDQGQPRDLEKAVLLRDALSDL 920
            FLWGAHP E L QFPLPTHDVV +Y  PSEF + N VAYD+GQPR+LEKAV+LRDA+SDL
Sbjct: 446  FLWGAHPGESLPQFPLPTHDVVAKYWPPSEF-ECNIVAYDEGQPRELEKAVVLRDAISDL 504

Query: 919  PDVTNHEVREEMPYEKLPETEFQIYIRSSKYDMMCSSTDGAKKSKKPVLYDHRPLPLNED 740
            P VTN+E R+EM Y K PETEFQ YIRS+K  M  SS+ G  K    +LYDHRP PLNED
Sbjct: 505  PAVTNYETRDEMLYGKPPETEFQKYIRSTKDAMAGSSSSGITKGYNSILYDHRPYPLNED 564

Query: 739  NISRVCQIPQRKGANFRDLPGVIVGPDNVAQLDPNMKRLLLPSGNPLVPDFVLTYEAGKS 560
            N  R+CQIP+RKGANFRDL GVIVG DNVA  DP MK +LLPSG+PLVPD V +YE GKS
Sbjct: 565  NYLRICQIPRRKGANFRDLSGVIVGTDNVAVRDPTMKPILLPSGHPLVPDCVFSYEQGKS 624

Query: 559  RRPYARLWWDETVPTIMTTPNPRNLVMLHPEQDRVLTIRECARLQGFPDYYKFFGSVTDR 380
            +RP+ARLWWDETVPT++T P  RN  +LHPEQDRVLTIRECARLQGFPDYY+F G+V +R
Sbjct: 625  KRPFARLWWDETVPTVLTFPYLRNQAILHPEQDRVLTIRECARLQGFPDYYRFRGTVKER 684

Query: 379  YRQIGNAVAVPVSRALGYALGMACXXXXXXXXXXXXXPKFSHS 251
            Y QIGNAVA PV+RALGY LGMA               KFSHS
Sbjct: 685  YCQIGNAVAFPVARALGYMLGMAFQNQSGNEALATLPLKFSHS 727



 Score = 46.2 bits (108), Expect(2) = e-113
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = -2

Query: 1160 ARLGIMAAGCYGLPQFRLRVFFMG 1089
            ARLG++AAGCYGLPQFRLRVF  G
Sbjct: 426  ARLGMIAAGCYGLPQFRLRVFLWG 449


>ref|XP_002519960.1| protein with unknown function [Ricinus communis]
            gi|223541006|gb|EEF42564.1| protein with unknown function
            [Ricinus communis]
          Length = 734

 Score =  390 bits (1003), Expect(2) = e-113
 Identities = 190/288 (65%), Positives = 227/288 (78%)
 Frame = -3

Query: 1099 FLWGAHPDEKLSQFPLPTHDVVLRYGAPSEFKQRNTVAYDQGQPRDLEKAVLLRDALSDL 920
            FLWGAHP EKL QFPLPTHDV++RY  P+EF +RNTVAYD+GQPR+LEKA +L+DA+SDL
Sbjct: 440  FLWGAHPSEKLPQFPLPTHDVIVRYWPPNEF-ERNTVAYDEGQPRELEKAAVLQDAISDL 498

Query: 919  PDVTNHEVREEMPYEKLPETEFQIYIRSSKYDMMCSSTDGAKKSKKPVLYDHRPLPLNED 740
            P VT HE REEM YEK PETEFQ +IRS++++M  SS  G  +    +L DHRP  L E+
Sbjct: 499  PPVTTHETREEMAYEKPPETEFQRFIRSTEHEMTGSSQRGTTQMNN-LLSDHRPYALTEE 557

Query: 739  NISRVCQIPQRKGANFRDLPGVIVGPDNVAQLDPNMKRLLLPSGNPLVPDFVLTYEAGKS 560
            + +RVC IP+RKGANFRDLPG++VG DNV + DP  +++LLPSG PLVPDF  T+E GKS
Sbjct: 558  DCARVCLIPKRKGANFRDLPGILVGNDNVVRRDPTKEQVLLPSGKPLVPDFAFTFEQGKS 617

Query: 559  RRPYARLWWDETVPTIMTTPNPRNLVMLHPEQDRVLTIRECARLQGFPDYYKFFGSVTDR 380
            +RPYARLWWDETVPT++T P+  +  MLHPEQDR LTIRECARLQGFPDYY+F G+V +R
Sbjct: 618  KRPYARLWWDETVPTVVTYPSIHSQAMLHPEQDRALTIRECARLQGFPDYYRFSGTVKER 677

Query: 379  YRQIGNAVAVPVSRALGYALGMACXXXXXXXXXXXXXPKFSHSSTMQL 236
            YRQIGNAVAVPV RALGYALGMA              PKFSHS+ +QL
Sbjct: 678  YRQIGNAVAVPVGRALGYALGMAFLKLSGDGPLMTLPPKFSHSTNLQL 725



 Score = 45.4 bits (106), Expect(2) = e-113
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -2

Query: 1160 ARLGIMAAGCYGLPQFRLRVFFMG 1089
            ARLG +AAGCYGLPQFRLRVF  G
Sbjct: 420  ARLGTIAAGCYGLPQFRLRVFLWG 443


>ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
            vinifera]
          Length = 1298

 Score =  380 bits (975), Expect(2) = e-111
 Identities = 183/292 (62%), Positives = 229/292 (78%)
 Frame = -3

Query: 1099 FLWGAHPDEKLSQFPLPTHDVVLRYGAPSEFKQRNTVAYDQGQPRDLEKAVLLRDALSDL 920
            F WGAHPDE+L QF LPTHDV+L+YGAP+ F +RN VAYD+GQ  DLEKA++L DA++DL
Sbjct: 1005 FFWGAHPDERLPQFALPTHDVILKYGAPTAF-ERNIVAYDEGQSPDLEKALVLGDAIADL 1063

Query: 919  PDVTNHEVREEMPYEKLPETEFQIYIRSSKYDMMCSSTDGAKKSKKPVLYDHRPLPLNED 740
            P V+N+E RE+M Y + PETEFQ YIR++K++MM S+  G +K++K VLYDH PLPLNED
Sbjct: 1064 PPVSNNETREQMSYRRPPETEFQKYIRATKWEMMGSACKGTRKAEKSVLYDHLPLPLNED 1123

Query: 739  NISRVCQIPQRKGANFRDLPGVIVGPDNVAQLDPNMKRLLLPSGNPLVPDFVLTYEAGKS 560
            +  RVC+IP++KGANFRDLPGV+VG +NVA+ DP  + + LPSG  +VPD+ L +  GKS
Sbjct: 1124 DYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTE-MELPSGKQMVPDYALNFSEGKS 1182

Query: 559  RRPYARLWWDETVPTIMTTPNPRNLVMLHPEQDRVLTIRECARLQGFPDYYKFFGSVTDR 380
             +P+ARLWWDETVPT++T P+P     LHPEQDRVLT+RE ARLQGFPDYYKF G V +R
Sbjct: 1183 TKPFARLWWDETVPTVLTKPDPHCQAYLHPEQDRVLTVRESARLQGFPDYYKFCGQVKER 1242

Query: 379  YRQIGNAVAVPVSRALGYALGMACXXXXXXXXXXXXXPKFSHSSTMQLMQPS 224
            Y QIGNAVAVPV+RALGYA+G+A              PKFSHS+T QL+Q S
Sbjct: 1243 YCQIGNAVAVPVARALGYAMGLAVQKLSRAEPLLTLPPKFSHSTTAQLLQAS 1294



 Score = 50.1 bits (118), Expect(2) = e-111
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 1160 ARLGIMAAGCYGLPQFRLRVFFMG 1089
            ARLGIMAAGCYGLPQ+RLRVFF G
Sbjct: 985  ARLGIMAAGCYGLPQYRLRVFFWG 1008


>emb|CBI26560.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  380 bits (975), Expect(2) = e-111
 Identities = 183/292 (62%), Positives = 229/292 (78%)
 Frame = -3

Query: 1099 FLWGAHPDEKLSQFPLPTHDVVLRYGAPSEFKQRNTVAYDQGQPRDLEKAVLLRDALSDL 920
            F WGAHPDE+L QF LPTHDV+L+YGAP+ F +RN VAYD+GQ  DLEKA++L DA++DL
Sbjct: 554  FFWGAHPDERLPQFALPTHDVILKYGAPTAF-ERNIVAYDEGQSPDLEKALVLGDAIADL 612

Query: 919  PDVTNHEVREEMPYEKLPETEFQIYIRSSKYDMMCSSTDGAKKSKKPVLYDHRPLPLNED 740
            P V+N+E RE+M Y + PETEFQ YIR++K++MM S+  G +K++K VLYDH PLPLNED
Sbjct: 613  PPVSNNETREQMSYRRPPETEFQKYIRATKWEMMGSACKGTRKAEKSVLYDHLPLPLNED 672

Query: 739  NISRVCQIPQRKGANFRDLPGVIVGPDNVAQLDPNMKRLLLPSGNPLVPDFVLTYEAGKS 560
            +  RVC+IP++KGANFRDLPGV+VG +NVA+ DP  + + LPSG  +VPD+ L +  GKS
Sbjct: 673  DYLRVCRIPKKKGANFRDLPGVVVGANNVARRDPKTE-MELPSGKQMVPDYALNFSEGKS 731

Query: 559  RRPYARLWWDETVPTIMTTPNPRNLVMLHPEQDRVLTIRECARLQGFPDYYKFFGSVTDR 380
             +P+ARLWWDETVPT++T P+P     LHPEQDRVLT+RE ARLQGFPDYYKF G V +R
Sbjct: 732  TKPFARLWWDETVPTVLTKPDPHCQAYLHPEQDRVLTVRESARLQGFPDYYKFCGQVKER 791

Query: 379  YRQIGNAVAVPVSRALGYALGMACXXXXXXXXXXXXXPKFSHSSTMQLMQPS 224
            Y QIGNAVAVPV+RALGYA+G+A              PKFSHS+T QL+Q S
Sbjct: 792  YCQIGNAVAVPVARALGYAMGLAVQKLSRAEPLLTLPPKFSHSTTAQLLQAS 843



 Score = 50.1 bits (118), Expect(2) = e-111
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -2

Query: 1160 ARLGIMAAGCYGLPQFRLRVFFMG 1089
            ARLGIMAAGCYGLPQ+RLRVFF G
Sbjct: 534  ARLGIMAAGCYGLPQYRLRVFFWG 557


Top