BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006560
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244...   220   5e-55
emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]   217   4e-54
gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]           208   3e-51
gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsu...   205   2e-50
ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267...   201   2e-49

>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
          Length = 330

 Score =  220 bits (561), Expect = 5e-55
 Identities = 149/344 (43%), Positives = 195/344 (56%), Gaps = 19/344 (5%)
 Frame = +3

Query: 87   SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 266
            S+ ++   K AL S+ ++S+A+ L  ++ VIS F +  +P +W SFRSWL PPYLYV   
Sbjct: 8    SSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVMWSSFRSWLKPPYLYVIIN 67

Query: 267  XXXXXXAASSRFQRNKIEEQMVL-----DDELVKIQEVLVSPVEYEEPVVLRSPVDIQHV 431
                  AASS+F R   +++        +DE  +    + +P E+   V L +P+     
Sbjct: 68   GIIITIAASSKFHRMNHQDRPETAAKDPEDERTEFTYEMKNPPEF---VGLETPI----- 119

Query: 432  TKNSMPEFEAFEATVPEIMLLEGKKEEENLVERVQNELAIWGATEMPI------RKESME 593
                   +E  E T+ E+     K   ++ V   + EL I  +T  P+      R+ES E
Sbjct: 120  ------VYEQREVTISEV-----KNVADSPVVEDEEELVISRSTTPPLPPSPLLRRESSE 168

Query: 594  IIPAVVDDLFMSKGKPPVSGRFGHRKIAKGSPE--GGKSLRVTKPKRHQDTLENTWKMIT 767
            I P    +  +S  KP VS RFGHRK  K SPE  GGK LRV+KPKRH+ TLENTWKMIT
Sbjct: 169  I-PL---ECLLSTEKPLVSSRFGHRKPIKASPEASGGKVLRVSKPKRHE-TLENTWKMIT 223

Query: 768  EGRSIPLARHLKKSDTWEMHSGNH-----NAGPQEHMKKSGTFNN-DGNMXXXXXXXXXX 929
            +GR +PL RHLKKSDTWE H G H     ++ PQ  + KS TF +   N           
Sbjct: 224  DGRHMPLTRHLKKSDTWENH-GRHIVVREDSSPQR-VNKSETFKDRTNNPPPSLTSPLDS 281

Query: 930  XXXXXEPSLSQDDLNRRVESFINKFNEEMRLQRLESLNSYKEMI 1061
                 +PSLSQD+LNRRVE+FI KFNEEMRLQR ESLN YKEMI
Sbjct: 282  VKLRKDPSLSQDELNRRVEAFIKKFNEEMRLQRQESLNQYKEMI 325


>emb|CAN65070.1| hypothetical protein VITISV_003953 [Vitis vinifera]
          Length = 407

 Score =  217 bits (553), Expect = 4e-54
 Identities = 151/356 (42%), Positives = 199/356 (55%), Gaps = 21/356 (5%)
 Frame = +3

Query: 57   LHHKTMA--NLFSNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRS 230
            +H + MA  +  S+ ++   K AL S+ ++S+A+ L  ++ VIS F +  +P  W SFRS
Sbjct: 73   VHRRRMAFVSRSSSTWLLSLKVALISIGVVSMAVILRQSIPVISEFAVSGVPVXWSSFRS 132

Query: 231  WLTPPYLYVXXXXXXXXXAASSRFQRNKIEEQMVL-----DDELVKIQEVLVSPVEYEEP 395
            WL PPYLYV         AASS+F R   +++        +DE  +    + +P E+   
Sbjct: 133  WLKPPYLYVIINGIIITIAASSKFHRMNHQDRPETAAKDPEDERTEFTYEMKNPPEF--- 189

Query: 396  VVLRSPVDIQHVTKNSMPEFEAFEATVPEIMLLEGKKEEENLVERVQNELAIWGATEMPI 575
            V L +P+            +E  E T+ E+     K   ++ V   + EL I  +T  P+
Sbjct: 190  VGLETPI-----------VYEQREVTISEV-----KXVADSPVVEDEEELXISRSTTPPL 233

Query: 576  ------RKESMEIIPAVVDDLFMSKGKPPVSGRFGHRKIAKGSPE--GGKSLRVTKPKRH 731
                  R+ES EI P    +  +S  KP VS RFGHRK  K SPE  GGK LRV+KPKRH
Sbjct: 234  PPSPLLRRESSEI-PL---ECLLSTEKPLVSSRFGHRKPIKASPEASGGKVLRVSKPKRH 289

Query: 732  QDTLENTWKMITEGRSIPLARHLKKSDTWEMHSGNH-----NAGPQEHMKKSGTFNN-DG 893
            + TLENTWKMIT+GR +PL RHLKKSDTWE H G H     ++ PQ  + KS TF +   
Sbjct: 290  E-TLENTWKMITDGRHMPLTRHLKKSDTWENH-GRHIVVREDSSPQR-VNKSETFKDRTN 346

Query: 894  NMXXXXXXXXXXXXXXXEPSLSQDDLNRRVESFINKFNEEMRLQRLESLNSYKEMI 1061
            N                +PSLSQD+LNRRVE+FI KFNEEM LQR ESLN YKEMI
Sbjct: 347  NPPPSLTSPLDSVKLRKDPSLSQDELNRRVEAFIKKFNEEMXLQRQESLNQYKEMI 402


>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score =  208 bits (529), Expect = 3e-51
 Identities = 141/335 (42%), Positives = 177/335 (52%), Gaps = 10/335 (2%)
 Frame = +3

Query: 87   SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 266
            ++ +I   K  L S  IL I + L +++ ++  F + Q P  W  FRSWL PPYLYV   
Sbjct: 4    ASTWILSLKVFLISTGILGIVLGLKISVPLVLEFSVSQAPLWWSGFRSWLKPPYLYVVIN 63

Query: 267  XXXXXXAASSRFQRNKIE-EQMVLDDELVKIQEVLVSPVEYEEPVVLRSPVDIQHVTKNS 443
                  AASSRF +N  E +QM       KI       VEYE     +S  D   V  + 
Sbjct: 64   GIIITIAASSRFNQNNGEKDQMEQMQPRPKISADQQPMVEYET----KSGWDSDAVESSD 119

Query: 444  MPEFEAFEATVPEIMLLEGKKEEENLV---ERVQNELAIWGATEMPIRKESMEIIPAVVD 614
                E       E  + E   EE N+    +R  NE  I  +  +P  +     IP    
Sbjct: 120  FVYEENQRGEEVETRVSE---EESNVAVKDDRDGNEFVISKSEWIPPSRTDSSEIPL--- 173

Query: 615  DLFMSKGKPPVSGRFGHRKIAKGSPEGGKSLRVTKPKRHQDTLENTWKMITEGRSIPLAR 794
            D  + + KP  S RFGHRK  K +PEGG++L+  KPKRH+ TLENTWKMITEG+S+PL+R
Sbjct: 174  DALLIQEKPAPSSRFGHRKPVKANPEGGRALKAAKPKRHE-TLENTWKMITEGKSMPLSR 232

Query: 795  HLKKSDTWEMHSGNHNAGPQEH---MKKSGTFNNDGNMXXXXXXXXXXXXXXX---EPSL 956
            HLKKSDTWE H  + N         MKKS TF +  N                   EPSL
Sbjct: 233  HLKKSDTWENHGRDINMEALTSSPLMKKSETFRDRTNYQLPPEQVSSFPASGKLRKEPSL 292

Query: 957  SQDDLNRRVESFINKFNEEMRLQRLESLNSYKEMI 1061
            SQD+LNRRVE+FI KFN+EMRLQR ESLN Y EM+
Sbjct: 293  SQDELNRRVEAFIKKFNDEMRLQRQESLNQYMEMV 327


>gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsutum]
          Length = 331

 Score =  205 bits (522), Expect = 2e-50
 Identities = 140/335 (41%), Positives = 179/335 (53%), Gaps = 10/335 (2%)
 Frame = +3

Query: 87   SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 266
            ++ +I   K  L S  IL IA+ L +++ ++  F + Q P  W  FRSWL PPYLYV   
Sbjct: 4    ASTWILSLKLLLISTGILGIALGLKISVPLVLEFSVSQAPLWWSGFRSWLKPPYLYVVIN 63

Query: 267  XXXXXXAASSRFQRNKIE-EQMVLDDELVKIQEVLVSPVEYEEPVVLRSPVDIQHVTKNS 443
                  AASSRF +N  E +QM       KI E     VEY+     +S      V  + 
Sbjct: 64   GIIITIAASSRFNQNNGEKDQMEQMQPRPKISEDQQPIVEYDT----KSGWGSDAVESS- 118

Query: 444  MPEFEAFEATVPEIMLLEGKKEEENLV---ERVQNELAIWGATEMPIRKESMEIIPAVVD 614
              +F   E    E +     +EE N+    +R  NE  I  +  +P  +     IP    
Sbjct: 119  --DFVYEENQRGEEVATRVSEEESNVAVEDDRDGNEFVISKSEWIPPSRTDSSEIPL--- 173

Query: 615  DLFMSKGKPPVSGRFGHRKIAKGSPEGGKSLRVTKPKRHQDTLENTWKMITEGRSIPLAR 794
            D  + + KP  S R GHRK  K +PEGG++L+  KPKRH+ TLENTWKMITEG+S+PL+R
Sbjct: 174  DALLIQEKPAPSSRSGHRKPVKVNPEGGRALKAAKPKRHE-TLENTWKMITEGKSMPLSR 232

Query: 795  HLKKSDTWEMHSGNHNAGPQEH---MKKSGTFNNDGNMXXXXXXXXXXXXXXX---EPSL 956
            HLKKSDTWE H  + N         MKKS TF +  N                   EPSL
Sbjct: 233  HLKKSDTWENHGRDINVEALTSSPLMKKSETFRDRTNYQLPPEQVSSFPASGKLRKEPSL 292

Query: 957  SQDDLNRRVESFINKFNEEMRLQRLESLNSYKEMI 1061
            SQD+LNRRVE+FI KFN+EMRLQR ESLN Y EM+
Sbjct: 293  SQDELNRRVEAFIKKFNDEMRLQRQESLNQYMEMV 327


>ref|XP_002284551.1| PREDICTED: uncharacterized protein LOC100267532 [Vitis vinifera]
          Length = 320

 Score =  201 bits (512), Expect = 2e-49
 Identities = 136/332 (40%), Positives = 186/332 (56%), Gaps = 6/332 (1%)
 Frame = +3

Query: 87   SNNFIFLRKFALYSVFILSIAITLMLNLSVISNFLILQLPELWGSFRSWLTPPYLYVXXX 266
            S N+    K  L S  ++S+A+ L +++ V+  F + ++P +W    SWL PPYLY+   
Sbjct: 8    STNWGLSLKVLLISTGVVSMAVALKISVPVVVEFAVSEVPSIWSFVLSWLRPPYLYLVIN 67

Query: 267  XXXXXXAASSRFQRNKIEEQMVLDDELVKIQEVLVSPVEYEEP---VVLRSPVDIQHVTK 437
                   ASS+ Q +K+EE      E  +I       ++Y  P   VV ++ V+++    
Sbjct: 68   FIIIIIVASSKLQ-HKVEEP----PETAEITISSAVAMDYAVPYNGVVSKNVVELR---- 118

Query: 438  NSMPEFE-AFEAT-VPEIMLLEGKKEEENLVERVQNELAIWGATEMPIRKESME-IIPAV 608
               PEF   ++A  V E    + K E + L     +E  I  ++  P RK+SME +IPA 
Sbjct: 119  ---PEFGYVYDANAVVEARAPDAKTEMKGLEMNDSDEFTISRSSWTPERKDSMENMIPAE 175

Query: 609  VDDLFMSKGKPPVSGRFGHRKIAKGSPEGGKSLRVTKPKRHQDTLENTWKMITEGRSIPL 788
                     KP VS RFGHR+  K SPE GK L V+KPKRH DTLE+TWK IT+GR +PL
Sbjct: 176  ---------KPLVSMRFGHRRAVKSSPEAGKVLGVSKPKRH-DTLESTWKTITDGRPMPL 225

Query: 789  ARHLKKSDTWEMHSGNHNAGPQEHMKKSGTFNNDGNMXXXXXXXXXXXXXXXEPSLSQDD 968
             RHLKK+D+ E    + +  PQ+ +KKS TF +  +                EPSLSQD+
Sbjct: 226  TRHLKKADSLESQRCSIDLTPQK-VKKSETFTDRSSTNSSVASSPGSGKMKREPSLSQDE 284

Query: 969  LNRRVESFINKFNEEMRLQRLESLNSYKEMIK 1064
            LNRRVE+FI KFNEEMRLQR ESLN Y EMI+
Sbjct: 285  LNRRVEAFIKKFNEEMRLQRQESLNQYNEMIR 316