BLASTX nr result

ID: Coptis23_contig00006546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006546
         (2052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259...   640   0.0  
ref|XP_002331736.1| predicted protein [Populus trichocarpa] gi|2...   633   e-179
ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|2...   633   e-179
ref|XP_002331740.1| predicted protein [Populus trichocarpa] gi|2...   629   e-178
ref|XP_004173680.1| PREDICTED: leucine-rich repeat extensin-like...   624   e-176

>ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259389 [Vitis vinifera]
          Length = 752

 Score =  640 bits (1652), Expect = 0.0
 Identities = 303/374 (81%), Positives = 334/374 (89%)
 Frame = +1

Query: 253  QNVFTTRNGDLTDAEVSYIKQRQLLYYRDEFGDRGENISVDPSLVFENPRLKNAYIALQA 432
            + +  + +G LTDAEV YIK+RQLLYYRDEFGDRGE+++VDPSLVFENPR +NAYIALQA
Sbjct: 28   EQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIALQA 87

Query: 433  WKQAIISDPMNITGNWVGSDVCSYTGVFCAPAPDNKTIKTVAGIDLNHADIAGYLPEELG 612
            WKQAI+SDP+N+T NWVGS+VC+YTGV+CA APDN +I+TVAGIDLNH DIAGYLPEELG
Sbjct: 88   WKQAILSDPLNLTLNWVGSNVCNYTGVYCAQAPDNSSIRTVAGIDLNHGDIAGYLPEELG 147

Query: 613  LLVDLALFHINSNRFCGTVPHKFVKLKLLFELDLSNNRFAGRFPEVVLRLPSLKFLDLRF 792
            LL DLALFHINSNRFCGTVPHKF KLK+LFELDLSNNRFAG+FPEVVL LP+LKFLDLRF
Sbjct: 148  LLTDLALFHINSNRFCGTVPHKFAKLKILFELDLSNNRFAGKFPEVVLHLPTLKFLDLRF 207

Query: 793  NEFEGGIPSELFDKDLDAIFINHNRFNLDLPHNLGNSPVSVIVLANNKFHGCVPASLGNM 972
            NEFEG +P ELFDKDLDAIFINHNRF  DLP N GNSPVSVIV+ANNK HGCVPASLGNM
Sbjct: 208  NEFEGTVPKELFDKDLDAIFINHNRFAFDLPDNFGNSPVSVIVVANNKLHGCVPASLGNM 267

Query: 973  SDTLNEIILMNNGFRSCLPPEIGLLKNLTVFDISYNELMGPLPDTIGGMVSLEQLNVAHN 1152
            +DTLNEIILMNN FRSCLP EIGLLKNLTV D+SYN L+GPLP  IGGMV LEQLNVAHN
Sbjct: 268  ADTLNEIILMNNQFRSCLPVEIGLLKNLTVLDVSYNGLLGPLPKEIGGMVELEQLNVAHN 327

Query: 1153 MLSGAIPGSVCLLPRLQNFTFSYNFFTGEPPVCLSLDDFDDSRNCLPGRPAQRSVQQCKS 1332
            MLSG+IP S+C LP L+NFTFSYNFFTGEPP CL L DF+D RNCLPGRP QRS  QC S
Sbjct: 328  MLSGSIPASICKLPNLENFTFSYNFFTGEPPACLGLADFEDRRNCLPGRPEQRSAGQCNS 387

Query: 1333 FLSRPVDCTSFSCA 1374
            FLSRPVDC+SF C+
Sbjct: 388  FLSRPVDCSSFRCS 401


>ref|XP_002331736.1| predicted protein [Populus trichocarpa] gi|222874139|gb|EEF11270.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  633 bits (1633), Expect = e-179
 Identities = 300/357 (84%), Positives = 327/357 (91%)
 Frame = +1

Query: 304  YIKQRQLLYYRDEFGDRGENISVDPSLVFENPRLKNAYIALQAWKQAIISDPMNITGNWV 483
            YI +RQLLYY+DEFGDRGE ++VDPSLVFENPRLKNAY+ALQAWKQAI SDP+N+T NWV
Sbjct: 2    YIDKRQLLYYKDEFGDRGERVTVDPSLVFENPRLKNAYMALQAWKQAIFSDPLNLTANWV 61

Query: 484  GSDVCSYTGVFCAPAPDNKTIKTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCG 663
            GS VC+Y GVFC+ APDNKTI+TVAGIDLNH DIAGYLPEELG LVDLALFHINSNRFCG
Sbjct: 62   GSQVCNYEGVFCSRAPDNKTIRTVAGIDLNHGDIAGYLPEELGFLVDLALFHINSNRFCG 121

Query: 664  TVPHKFVKLKLLFELDLSNNRFAGRFPEVVLRLPSLKFLDLRFNEFEGGIPSELFDKDLD 843
            T+PHKF KL+LLFELDLSNNRFAG+FP+VVL+LPSLKFLDLRFNEFEG +P ELFDKDLD
Sbjct: 122  TIPHKFKKLRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVPKELFDKDLD 181

Query: 844  AIFINHNRFNLDLPHNLGNSPVSVIVLANNKFHGCVPASLGNMSDTLNEIILMNNGFRSC 1023
            AIFINHNRF  DLP N GNSPVSVIVLANNKFHGCVP+SLGNMS+ LNEIILMNNGFRSC
Sbjct: 182  AIFINHNRFVFDLPVNFGNSPVSVIVLANNKFHGCVPSSLGNMSN-LNEIILMNNGFRSC 240

Query: 1024 LPPEIGLLKNLTVFDISYNELMGPLPDTIGGMVSLEQLNVAHNMLSGAIPGSVCLLPRLQ 1203
            LP EIGLLKNLTVFD+S+N+L+GPLPDT+GGMVSLEQLNVAHNMLSG IP S+C LP L+
Sbjct: 241  LPAEIGLLKNLTVFDVSFNQLIGPLPDTVGGMVSLEQLNVAHNMLSGKIPASICQLPNLE 300

Query: 1204 NFTFSYNFFTGEPPVCLSLDDFDDSRNCLPGRPAQRSVQQCKSFLSRPVDCTSFSCA 1374
            NFTFSYNFFTGEPPVCLSL DF D RNCLPGRP QRS  QCK+FLS PVDC+SF CA
Sbjct: 301  NFTFSYNFFTGEPPVCLSLPDFSDRRNCLPGRPEQRSAAQCKAFLSMPVDCSSFRCA 357


>ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|222866408|gb|EEF03539.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  633 bits (1632), Expect = e-179
 Identities = 300/366 (81%), Positives = 328/366 (89%)
 Frame = +1

Query: 277  GDLTDAEVSYIKQRQLLYYRDEFGDRGENISVDPSLVFENPRLKNAYIALQAWKQAIISD 456
            G L+DA+  YIK+RQLLYY+DEFGDRGE ++VDPSLVF NPRL+NAYIALQAWKQAI SD
Sbjct: 38   GGLSDADAMYIKKRQLLYYKDEFGDRGERVTVDPSLVFPNPRLRNAYIALQAWKQAIFSD 97

Query: 457  PMNITGNWVGSDVCSYTGVFCAPAPDNKTIKTVAGIDLNHADIAGYLPEELGLLVDLALF 636
            P+N+T NWVGS VC+Y GVFCAPAPDNKTI+TVAGIDLNH DIAGYLPEELGLLVD+ALF
Sbjct: 98   PLNLTANWVGSQVCNYEGVFCAPAPDNKTIRTVAGIDLNHGDIAGYLPEELGLLVDIALF 157

Query: 637  HINSNRFCGTVPHKFVKLKLLFELDLSNNRFAGRFPEVVLRLPSLKFLDLRFNEFEGGIP 816
            HINSNRFCGTVP KF  ++LLFELDLSNNRFAG+FP+VVL+LPSLKFLDLRFNEFEG +P
Sbjct: 158  HINSNRFCGTVPRKFKDMRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVP 217

Query: 817  SELFDKDLDAIFINHNRFNLDLPHNLGNSPVSVIVLANNKFHGCVPASLGNMSDTLNEII 996
             ELFDKDLDAIFINHNRF  DLP NLGNSPVSVIVLANNKFHGCVP+SLGNMS+ LNEII
Sbjct: 218  KELFDKDLDAIFINHNRFVFDLPENLGNSPVSVIVLANNKFHGCVPSSLGNMSN-LNEII 276

Query: 997  LMNNGFRSCLPPEIGLLKNLTVFDISYNELMGPLPDTIGGMVSLEQLNVAHNMLSGAIPG 1176
            LMNNGFRSC+P EIGLLK+LTV D+S+N+LMGPLPD  GGM SLEQLNVAHNMLSG IP 
Sbjct: 277  LMNNGFRSCMPAEIGLLKDLTVLDVSFNQLMGPLPDAFGGMASLEQLNVAHNMLSGKIPA 336

Query: 1177 SVCLLPRLQNFTFSYNFFTGEPPVCLSLDDFDDSRNCLPGRPAQRSVQQCKSFLSRPVDC 1356
            S+C LP L NFTFSYNFFTGEPPVCLSL DF D RNCLP RP QRS  QC +FLSRPVDC
Sbjct: 337  SICKLPNLDNFTFSYNFFTGEPPVCLSLPDFSDRRNCLPARPLQRSAAQCNAFLSRPVDC 396

Query: 1357 TSFSCA 1374
            +SF CA
Sbjct: 397  SSFRCA 402


>ref|XP_002331740.1| predicted protein [Populus trichocarpa] gi|222874266|gb|EEF11397.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  629 bits (1622), Expect = e-178
 Identities = 298/353 (84%), Positives = 324/353 (91%)
 Frame = +1

Query: 316  RQLLYYRDEFGDRGENISVDPSLVFENPRLKNAYIALQAWKQAIISDPMNITGNWVGSDV 495
            RQLLYY+DEFGDRGE ++VDPSLVFENPRLKNAY+ALQAWKQAI SDP+N+T NWVGS V
Sbjct: 1    RQLLYYKDEFGDRGERVTVDPSLVFENPRLKNAYMALQAWKQAIFSDPLNLTANWVGSQV 60

Query: 496  CSYTGVFCAPAPDNKTIKTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTVPH 675
            C+Y GVFC+ APDNKTI+TVAGIDLNH DIAGYLPEELG LVDLALFHINSNRFCGT+PH
Sbjct: 61   CNYEGVFCSRAPDNKTIRTVAGIDLNHGDIAGYLPEELGFLVDLALFHINSNRFCGTIPH 120

Query: 676  KFVKLKLLFELDLSNNRFAGRFPEVVLRLPSLKFLDLRFNEFEGGIPSELFDKDLDAIFI 855
            KF KL+LLFELDLSNNRFAG+FP+VVL+LPSLKFLDLRFNEFEG +P ELFDKDLDAIFI
Sbjct: 121  KFKKLRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVPKELFDKDLDAIFI 180

Query: 856  NHNRFNLDLPHNLGNSPVSVIVLANNKFHGCVPASLGNMSDTLNEIILMNNGFRSCLPPE 1035
            NHNRF  DLP N GNSPVSVIVLANNKFHGCVP+SLGNMS+ LNEIILMNNGFRSCLP E
Sbjct: 181  NHNRFVFDLPVNFGNSPVSVIVLANNKFHGCVPSSLGNMSN-LNEIILMNNGFRSCLPAE 239

Query: 1036 IGLLKNLTVFDISYNELMGPLPDTIGGMVSLEQLNVAHNMLSGAIPGSVCLLPRLQNFTF 1215
            IGLLKNLTVFD+S+N+L+GPLPDT+GGMVSLEQLNVAHNMLSG IP S+C LP L+NFTF
Sbjct: 240  IGLLKNLTVFDVSFNQLIGPLPDTVGGMVSLEQLNVAHNMLSGKIPASICQLPNLENFTF 299

Query: 1216 SYNFFTGEPPVCLSLDDFDDSRNCLPGRPAQRSVQQCKSFLSRPVDCTSFSCA 1374
            SYNFFTGEPPVCLSL DF D RNCLPGRP QRS  QCK+FLS PVDC+SF CA
Sbjct: 300  SYNFFTGEPPVCLSLPDFSDRRNCLPGRPEQRSAAQCKAFLSMPVDCSSFRCA 352


>ref|XP_004173680.1| PREDICTED: leucine-rich repeat extensin-like protein 5-like, partial
            [Cucumis sativus]
          Length = 451

 Score =  624 bits (1608), Expect = e-176
 Identities = 297/363 (81%), Positives = 320/363 (88%)
 Frame = +1

Query: 283  LTDAEVSYIKQRQLLYYRDEFGDRGENISVDPSLVFENPRLKNAYIALQAWKQAIISDPM 462
            LTDAE  YI+QRQLLYYRDEFGDRGE + VDP LVFEN R++NAYIALQAWKQAI+SDP+
Sbjct: 47   LTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDPKLVFENDRIRNAYIALQAWKQAILSDPL 106

Query: 463  NITGNWVGSDVCSYTGVFCAPAPDNKTIKTVAGIDLNHADIAGYLPEELGLLVDLALFHI 642
            N+T NWVGSDVC Y GVFCAPAPDN +I+TVAGIDLNH DIAGYLPEELGLLVDLALFHI
Sbjct: 107  NLTKNWVGSDVCHYKGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHI 166

Query: 643  NSNRFCGTVPHKFVKLKLLFELDLSNNRFAGRFPEVVLRLPSLKFLDLRFNEFEGGIPSE 822
            NSNRFCGTVPHKF  LKLLFELDLSNNRFAG+FP VVL LP LKFLDLRFNEFEG +P E
Sbjct: 167  NSNRFCGTVPHKFKNLKLLFELDLSNNRFAGKFPRVVLELPELKFLDLRFNEFEGTVPKE 226

Query: 823  LFDKDLDAIFINHNRFNLDLPHNLGNSPVSVIVLANNKFHGCVPASLGNMSDTLNEIILM 1002
            LFDKDLDAIFINHNRF  DLP N GNSPVSVIVLANNKFHGCVP S+GNM+  LNEIILM
Sbjct: 227  LFDKDLDAIFINHNRFRFDLPENFGNSPVSVIVLANNKFHGCVPGSIGNMT-RLNEIILM 285

Query: 1003 NNGFRSCLPPEIGLLKNLTVFDISYNELMGPLPDTIGGMVSLEQLNVAHNMLSGAIPGSV 1182
            NNGFRSCLP EIG LKNLTVFD+S+NE  G LP+TIGGMVSLEQLNVAHN LSG IP S+
Sbjct: 286  NNGFRSCLPSEIGFLKNLTVFDVSHNEFFGKLPETIGGMVSLEQLNVAHNFLSGKIPDSI 345

Query: 1183 CLLPRLQNFTFSYNFFTGEPPVCLSLDDFDDSRNCLPGRPAQRSVQQCKSFLSRPVDCTS 1362
            C LP LQNFT+SYNFFTGE P CL+L DFDD RNC+P RP QRS +QCKSFLS+PVDC+S
Sbjct: 346  CKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCIPERPVQRSERQCKSFLSKPVDCSS 405

Query: 1363 FSC 1371
            F C
Sbjct: 406  FGC 408


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