BLASTX nr result

ID: Coptis23_contig00006545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006545
         (1894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...   671   0.0  
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...   657   0.0  
ref|XP_002318160.1| predicted protein [Populus trichocarpa] gi|2...   662   0.0  
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...   654   0.0  
dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]   652   0.0  

>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score =  671 bits (1730), Expect(2) = 0.0
 Identities = 322/361 (89%), Positives = 345/361 (95%)
 Frame = -1

Query: 1780 MIKIPYTTALTTLFSYGLLFAFGQIRDLFRKFIDFLRSNNLQGYAPICLGLEDFYVRRLY 1601
            MI IPY TALTTLFSYGLLFAFGQ RD FRK  D+ +++NLQGYAPICLGLEDFY+RRLY
Sbjct: 1    MITIPYLTALTTLFSYGLLFAFGQFRDFFRKIFDWWKASNLQGYAPICLGLEDFYIRRLY 60

Query: 1600 LRIQDCFGRPIASAPDAWFDVVERFSNDSNKTLKRTTNLSKCLNLGSYNYLGFASSDEYC 1421
            LRIQDCFGRPI+SAPDAWFDVVERFSND+NKTLKRTT +SKCLNLGSYNYLGFA+SDE+C
Sbjct: 61   LRIQDCFGRPISSAPDAWFDVVERFSNDNNKTLKRTTKISKCLNLGSYNYLGFAASDEFC 120

Query: 1420 TPRVIESLKRFSPSTCSTRVDGGTTILHTELEQCVAKFVGKPASIVFGMGYVTNSAILPV 1241
            TPRVIESLKRFSP TCSTRVDGGTT LH E+E+CVA FVGKPA+IVFGMGYVTNSAILPV
Sbjct: 121  TPRVIESLKRFSPGTCSTRVDGGTTTLHKEVEECVANFVGKPAAIVFGMGYVTNSAILPV 180

Query: 1240 LVGKGGLIVSDSLNHNSIVNGAKGSGATVRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 1061
            L+GKGGLI+SDSLNHNSIVNGA+GSGATVRVFQHN PSHLE+VLREQIAEGQPRT RPWK
Sbjct: 181  LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNIPSHLEKVLREQIAEGQPRTHRPWK 240

Query: 1060 KIIVVVEGIYSMEGELCKLPEIVTVCKKYKAYIYLDEAHSIGAVGKTGRGVCELLGVDTA 881
            KIIVVVEGIYSMEGELCKLPEIV +CKKYKAY+YLDEAHSIGAVGKTGRGVCELLGVDTA
Sbjct: 241  KIIVVVEGIYSMEGELCKLPEIVAICKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA 300

Query: 880  DVDIMMGTFTKSFGSCGGYIAGSKELIEYLKQTCPAHLYATAISPPAAQQILSAIKVILG 701
            DVDIMMGTFTKSFGSCGGYIAGSKELI+YLK TCPAHLYAT+ISPPAAQQI+S+IKVILG
Sbjct: 301  DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQIISSIKVILG 360

Query: 700  E 698
            E
Sbjct: 361  E 361



 Score =  172 bits (435), Expect(2) = 0.0
 Identities = 87/106 (82%), Positives = 92/106 (86%)
 Frame = -2

Query: 597 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXPLLLARARIC 418
           ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN           PLLLARARIC
Sbjct: 384 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARIC 443

Query: 417 LSASHSREDLVKGLEVISRVGDLVGIKYFPAEPKKQHWEEGRVKLE 280
           +SASH+REDL+KGLEVISRVGDLV IKYFPAEP+KQ  EEGRVKLE
Sbjct: 444 ISASHTREDLIKGLEVISRVGDLVAIKYFPAEPRKQQLEEGRVKLE 489


>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
            gi|297734488|emb|CBI15735.3| unnamed protein product
            [Vitis vinifera]
          Length = 513

 Score =  657 bits (1695), Expect(2) = 0.0
 Identities = 322/385 (83%), Positives = 345/385 (89%), Gaps = 24/385 (6%)
 Frame = -1

Query: 1780 MIKIPYTTALTTLFSYGLLFAFGQIRDLFRKFIDFLRSNNLQGYAPICLGLEDFYVRRLY 1601
            MI IPY TALTTLFSYGLLFAFGQ RD FRK  D+ +++NLQGYAPICLGLEDFY+RRLY
Sbjct: 1    MITIPYLTALTTLFSYGLLFAFGQFRDFFRKIFDWWKASNLQGYAPICLGLEDFYIRRLY 60

Query: 1600 LRIQDCFGRPIASAPDAWFDVVERFSNDSNKTLKRTTNLSKCLNLGSYNYLGFASSDEYC 1421
            LRIQDCFGRPI+SAPDAWFDVVERFSND+NKTLKRTT +SKCLNLGSYNYLGFA+SDE+C
Sbjct: 61   LRIQDCFGRPISSAPDAWFDVVERFSNDNNKTLKRTTKISKCLNLGSYNYLGFAASDEFC 120

Query: 1420 TPRVIESLKRFSPSTCSTRVDGGTTILHTELEQCVAKFVGKPASIVFGMGYVTNSAILPV 1241
            TPRVIESLKRFSP TCSTRVDGGTT LH E+E+CVA FVGKPA+IVFGMGYVTNSAILPV
Sbjct: 121  TPRVIESLKRFSPGTCSTRVDGGTTTLHKEVEECVANFVGKPAAIVFGMGYVTNSAILPV 180

Query: 1240 LVGKGGLIVSDSLNHNSIVNGAKGSGATVRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 1061
            L+GKGGLI+SDSLNHNSIVNGA+GSGATVRVFQHN PSHLE+VLREQIAEGQPRT RPWK
Sbjct: 181  LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNIPSHLEKVLREQIAEGQPRTHRPWK 240

Query: 1060 KIIVVVEGIYSMEGELCKLPEIVTVCKK------------------------YKAYIYLD 953
            KIIVVVEGIYSMEGELCKLPEIV +CKK                        YKAY+YLD
Sbjct: 241  KIIVVVEGIYSMEGELCKLPEIVAICKKYKVCSSTQKNLQSSGACYRYASMTYKAYVYLD 300

Query: 952  EAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIEYLKQTCPA 773
            EAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELI+YLK TCPA
Sbjct: 301  EAHSIGAVGKTGRGVCELLGVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA 360

Query: 772  HLYATAISPPAAQQILSAIKVILGE 698
            HLYAT+ISPPAAQQI+S+IKVILGE
Sbjct: 361  HLYATSISPPAAQQIISSIKVILGE 385



 Score =  172 bits (435), Expect(2) = 0.0
 Identities = 87/106 (82%), Positives = 92/106 (86%)
 Frame = -2

Query: 597 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXPLLLARARIC 418
           ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN           PLLLARARIC
Sbjct: 408 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARIC 467

Query: 417 LSASHSREDLVKGLEVISRVGDLVGIKYFPAEPKKQHWEEGRVKLE 280
           +SASH+REDL+KGLEVISRVGDLV IKYFPAEP+KQ  EEGRVKLE
Sbjct: 468 ISASHTREDLIKGLEVISRVGDLVAIKYFPAEPRKQQLEEGRVKLE 513


>ref|XP_002318160.1| predicted protein [Populus trichocarpa] gi|222858833|gb|EEE96380.1|
            predicted protein [Populus trichocarpa]
          Length = 489

 Score =  662 bits (1708), Expect(2) = 0.0
 Identities = 318/361 (88%), Positives = 342/361 (94%)
 Frame = -1

Query: 1780 MIKIPYTTALTTLFSYGLLFAFGQIRDLFRKFIDFLRSNNLQGYAPICLGLEDFYVRRLY 1601
            MIKIPY TAL+T FSYGLLFAFGQ RD FRK  D   S+NLQGYAPICLGLEDFY+RRLY
Sbjct: 1    MIKIPYLTALSTYFSYGLLFAFGQFRDFFRKIFDSWHSSNLQGYAPICLGLEDFYIRRLY 60

Query: 1600 LRIQDCFGRPIASAPDAWFDVVERFSNDSNKTLKRTTNLSKCLNLGSYNYLGFASSDEYC 1421
            LRIQDCFGRPI+S+P AWFDVVER+SND+NKTLKRTT +++CLNLGSYNYLGFA++DEYC
Sbjct: 61   LRIQDCFGRPISSSPGAWFDVVERYSNDNNKTLKRTTKVTRCLNLGSYNYLGFAAADEYC 120

Query: 1420 TPRVIESLKRFSPSTCSTRVDGGTTILHTELEQCVAKFVGKPASIVFGMGYVTNSAILPV 1241
            TPRVIE+LKRFSPSTCS RVDGGTTILH ELE CVA FVGKPA+IVFGMGYVTNSAILPV
Sbjct: 121  TPRVIETLKRFSPSTCSPRVDGGTTILHNELEVCVANFVGKPAAIVFGMGYVTNSAILPV 180

Query: 1240 LVGKGGLIVSDSLNHNSIVNGAKGSGATVRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 1061
            L+GKGGLI+SDSLNHNSIVNGA+GSGATVRVFQHNTPSHLEEVLR+QIAEGQPRT RPWK
Sbjct: 181  LIGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNTPSHLEEVLRQQIAEGQPRTHRPWK 240

Query: 1060 KIIVVVEGIYSMEGELCKLPEIVTVCKKYKAYIYLDEAHSIGAVGKTGRGVCELLGVDTA 881
            KIIV+VEGIYSMEGELCKLPEIV VCKKYKAY+YLDEAHSIGAVGKTGRGVCELLGVDTA
Sbjct: 241  KIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA 300

Query: 880  DVDIMMGTFTKSFGSCGGYIAGSKELIEYLKQTCPAHLYATAISPPAAQQILSAIKVILG 701
            DVDIMMGTFTKSFGSCGGYIAGSKELI+YLK  CPAHLYAT+ISPPAAQQI+S+IKVILG
Sbjct: 301  DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYNCPAHLYATSISPPAAQQIISSIKVILG 360

Query: 700  E 698
            E
Sbjct: 361  E 361



 Score =  161 bits (408), Expect(2) = 0.0
 Identities = 82/106 (77%), Positives = 89/106 (83%)
 Frame = -2

Query: 597 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXPLLLARARIC 418
           ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN           PLLLARARIC
Sbjct: 384 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARIC 443

Query: 417 LSASHSREDLVKGLEVISRVGDLVGIKYFPAEPKKQHWEEGRVKLE 280
           +SASH++EDL+K LEVIS+VGDLVGIKYFPAE  KQH E G +KLE
Sbjct: 444 ISASHTKEDLLKALEVISQVGDLVGIKYFPAESDKQHQEPGALKLE 489


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
            gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
            long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score =  654 bits (1687), Expect(2) = 0.0
 Identities = 314/361 (86%), Positives = 337/361 (93%)
 Frame = -1

Query: 1780 MIKIPYTTALTTLFSYGLLFAFGQIRDLFRKFIDFLRSNNLQGYAPICLGLEDFYVRRLY 1601
            MI IPY TALTT FSYGLLFAFGQ RD FRK  D+ R  NLQGYAPICLGLEDFY+RRLY
Sbjct: 1    MITIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWWRPRNLQGYAPICLGLEDFYIRRLY 60

Query: 1600 LRIQDCFGRPIASAPDAWFDVVERFSNDSNKTLKRTTNLSKCLNLGSYNYLGFASSDEYC 1421
             RIQDCFGRPI S PDAWFDVVER SND+NKTLKRTT +S+CLNLGSYNYLGFA+SDEYC
Sbjct: 61   HRIQDCFGRPICSPPDAWFDVVERVSNDNNKTLKRTTKVSRCLNLGSYNYLGFAASDEYC 120

Query: 1420 TPRVIESLKRFSPSTCSTRVDGGTTILHTELEQCVAKFVGKPASIVFGMGYVTNSAILPV 1241
            TPRVIESLK+FS STCS RVDGGTT +HTELE+CVA FVGKPA+IV GMGYVTNSAILPV
Sbjct: 121  TPRVIESLKKFSASTCSARVDGGTTSIHTELEECVANFVGKPAAIVTGMGYVTNSAILPV 180

Query: 1240 LVGKGGLIVSDSLNHNSIVNGAKGSGATVRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 1061
            L+GKGGLI+SDSLNHNSIVNGA+GSGAT+RVFQHNTPSHLE+VLRE IAEGQPRT RPWK
Sbjct: 181  LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEKVLREHIAEGQPRTHRPWK 240

Query: 1060 KIIVVVEGIYSMEGELCKLPEIVTVCKKYKAYIYLDEAHSIGAVGKTGRGVCELLGVDTA 881
            KI+V+VEGIYSMEGELC+LPEIV +CKKYKAY+YLDEAHSIGAVGKTGRGVCELLGVDTA
Sbjct: 241  KIVVIVEGIYSMEGELCQLPEIVAICKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA 300

Query: 880  DVDIMMGTFTKSFGSCGGYIAGSKELIEYLKQTCPAHLYATAISPPAAQQILSAIKVILG 701
            DVDIMMGTFTKSFGSCGGYIAGSKELIE+LK TCPAHLYAT+ISPPAAQQI+SAIKVILG
Sbjct: 301  DVDIMMGTFTKSFGSCGGYIAGSKELIEFLKYTCPAHLYATSISPPAAQQIISAIKVILG 360

Query: 700  E 698
            E
Sbjct: 361  E 361



 Score =  168 bits (426), Expect(2) = 0.0
 Identities = 87/106 (82%), Positives = 90/106 (84%)
 Frame = -2

Query: 597 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXPLLLARARIC 418
           ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN           PLLLARARIC
Sbjct: 384 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVIVGFPATPLLLARARIC 443

Query: 417 LSASHSREDLVKGLEVISRVGDLVGIKYFPAEPKKQHWEEGRVKLE 280
           +SA+HSREDL K LEVISRVGDLVGIKYFPAEPKKQ  EE RVKLE
Sbjct: 444 ISAAHSREDLNKALEVISRVGDLVGIKYFPAEPKKQQLEENRVKLE 489


>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
          Length = 489

 Score =  652 bits (1683), Expect(2) = 0.0
 Identities = 313/361 (86%), Positives = 338/361 (93%)
 Frame = -1

Query: 1780 MIKIPYTTALTTLFSYGLLFAFGQIRDLFRKFIDFLRSNNLQGYAPICLGLEDFYVRRLY 1601
            MI IPY TALTT FSYGLLFAFGQ RD FRK  D+ +++NLQGYAPICLGLEDFY+RRLY
Sbjct: 1    MITIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWWKASNLQGYAPICLGLEDFYIRRLY 60

Query: 1600 LRIQDCFGRPIASAPDAWFDVVERFSNDSNKTLKRTTNLSKCLNLGSYNYLGFASSDEYC 1421
             RIQDCFGRPI S PDAWFDVVER SND+NKTLKRTT +S+CLNLGSYNYLGFA+SDEYC
Sbjct: 61   HRIQDCFGRPICSPPDAWFDVVERVSNDNNKTLKRTTKVSRCLNLGSYNYLGFAASDEYC 120

Query: 1420 TPRVIESLKRFSPSTCSTRVDGGTTILHTELEQCVAKFVGKPASIVFGMGYVTNSAILPV 1241
            TPRVIESLK+FS STCS RVDGGTT +H ELE+CVA FVGKPA+IV GMGYVTNSAILPV
Sbjct: 121  TPRVIESLKKFSASTCSARVDGGTTSIHMELEECVANFVGKPAAIVTGMGYVTNSAILPV 180

Query: 1240 LVGKGGLIVSDSLNHNSIVNGAKGSGATVRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 1061
            L+GKGGLI+SDSLNHNSIVNGA+GSGAT+RVFQHNTPSHLE+VLRE IAEGQPRT RPWK
Sbjct: 181  LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEKVLREHIAEGQPRTHRPWK 240

Query: 1060 KIIVVVEGIYSMEGELCKLPEIVTVCKKYKAYIYLDEAHSIGAVGKTGRGVCELLGVDTA 881
            KIIV+VEGIYSMEGELC+LPEIV +CKKYKAY+YLDEAHSIGAVGKTGRGVCELLGVDTA
Sbjct: 241  KIIVIVEGIYSMEGELCQLPEIVAICKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA 300

Query: 880  DVDIMMGTFTKSFGSCGGYIAGSKELIEYLKQTCPAHLYATAISPPAAQQILSAIKVILG 701
            DVDIMMGTFTKSFGSCGGYIAGSKELIE+LK TCPAHLYAT+ISPPAAQQI+SAIKVILG
Sbjct: 301  DVDIMMGTFTKSFGSCGGYIAGSKELIEFLKHTCPAHLYATSISPPAAQQIISAIKVILG 360

Query: 700  E 698
            E
Sbjct: 361  E 361



 Score =  168 bits (426), Expect(2) = 0.0
 Identities = 87/106 (82%), Positives = 90/106 (84%)
 Frame = -2

Query: 597 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXPLLLARARIC 418
           ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN           PLLLARARIC
Sbjct: 384 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVIVGFPATPLLLARARIC 443

Query: 417 LSASHSREDLVKGLEVISRVGDLVGIKYFPAEPKKQHWEEGRVKLE 280
           +SA+HSREDL K LEVISRVGDLVGIKYFPAEPKKQ  EE RVKLE
Sbjct: 444 ISAAHSREDLNKALEVISRVGDLVGIKYFPAEPKKQQLEENRVKLE 489


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