BLASTX nr result

ID: Coptis23_contig00006541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00006541
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN65067.1| Similar to CGI-126 protein [Arabidopsis thaliana]      266   2e-69
ref|NP_564289.1| ubiquitin-fold modifier-conjugating enzyme 1 [A...   266   2e-69
ref|NP_001236810.1| uncharacterized protein LOC100527748 [Glycin...   266   2e-69
ref|XP_003603683.1| Ubiquitin-fold modifier-conjugating enzyme [...   265   4e-69
ref|XP_003603681.1| Ubiquitin-fold modifier-conjugating enzyme [...   265   4e-69

>gb|AAN65067.1| Similar to CGI-126 protein [Arabidopsis thaliana]
          Length = 174

 Score =  266 bits (681), Expect = 2e-69
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = +3

Query: 51  MESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFRISA 230
           ME WDPNTKSTLT+IPLLTTKAGPRDGA WTQRLKEEYKSLI YT MNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 231 ANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTHKMYRGGKICL 410
           +NPEGT+WTGKCWYVHNLLKYEFDLQFDIP+TYPATAPELELPE+DGKT KMYRGGKICL
Sbjct: 61  SNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICL 120

Query: 411 TVHFKPLWAK 440
           TVHFKPLWAK
Sbjct: 121 TVHFKPLWAK 130


>ref|NP_564289.1| ubiquitin-fold modifier-conjugating enzyme 1 [Arabidopsis thaliana]
           gi|297851184|ref|XP_002893473.1| hypothetical protein
           ARALYDRAFT_472958 [Arabidopsis lyrata subsp. lyrata]
           gi|75213217|sp|Q9SXC8.1|UFC1_ARATH RecName:
           Full=Ubiquitin-fold modifier-conjugating enzyme 1;
           AltName: Full=Ufm1-conjugating enzyme 1
           gi|5668764|gb|AAD45991.1|AC005916_3 Similar to
           gb|AF151884 CGI-126 protein from Homo sapiens. EST
           gb|Z18048 comes from this gene [Arabidopsis thaliana]
           gi|15451104|gb|AAK96823.1| Similar to CGI-126 protein
           [Arabidopsis thaliana] gi|21553822|gb|AAM62915.1|
           unknown [Arabidopsis thaliana]
           gi|297339315|gb|EFH69732.1| hypothetical protein
           ARALYDRAFT_472958 [Arabidopsis lyrata subsp. lyrata]
           gi|332192721|gb|AEE30842.1| ubiquitin-fold
           modifier-conjugating enzyme 1 [Arabidopsis thaliana]
          Length = 174

 Score =  266 bits (681), Expect = 2e-69
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = +3

Query: 51  MESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFRISA 230
           ME WDPNTKSTLT+IPLLTTKAGPRDGA WTQRLKEEYKSLI YT MNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 231 ANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTHKMYRGGKICL 410
           +NPEGT+WTGKCWYVHNLLKYEFDLQFDIP+TYPATAPELELPE+DGKT KMYRGGKICL
Sbjct: 61  SNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICL 120

Query: 411 TVHFKPLWAK 440
           TVHFKPLWAK
Sbjct: 121 TVHFKPLWAK 130


>ref|NP_001236810.1| uncharacterized protein LOC100527748 [Glycine max]
           gi|255633104|gb|ACU16907.1| unknown [Glycine max]
          Length = 175

 Score =  266 bits (681), Expect = 2e-69
 Identities = 120/130 (92%), Positives = 125/130 (96%)
 Frame = +3

Query: 51  MESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFRISA 230
           ME WDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYK+LI YT MNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 231 ANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTHKMYRGGKICL 410
           ANPEGT+WTGKCWYVHNLLKYEFDLQFD+PVTYP+TAPELELP+LDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDVPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 411 TVHFKPLWAK 440
           TVHFKPLWAK
Sbjct: 121 TVHFKPLWAK 130


>ref|XP_003603683.1| Ubiquitin-fold modifier-conjugating enzyme [Medicago truncatula]
           gi|355492731|gb|AES73934.1| Ubiquitin-fold
           modifier-conjugating enzyme [Medicago truncatula]
          Length = 318

 Score =  265 bits (678), Expect = 4e-69
 Identities = 120/133 (90%), Positives = 127/133 (95%)
 Frame = +3

Query: 42  RRKMESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFR 221
           +R+ME WDPNTKSTLTQIPLLTTKAGPRDGA WT RLKEEYKSLI YT MNKSNDNDWFR
Sbjct: 142 KREMEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKSLIAYTQMNKSNDNDWFR 201

Query: 222 ISAANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTHKMYRGGK 401
           ISA+NPEGT+WTGKCWYV+NLLKYEFDLQFDIPVTYP+TAPELELP+LDGKT KMYRGGK
Sbjct: 202 ISASNPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGK 261

Query: 402 ICLTVHFKPLWAK 440
           ICLTVHFKPLWAK
Sbjct: 262 ICLTVHFKPLWAK 274


>ref|XP_003603681.1| Ubiquitin-fold modifier-conjugating enzyme [Medicago truncatula]
           gi|355492729|gb|AES73932.1| Ubiquitin-fold
           modifier-conjugating enzyme [Medicago truncatula]
          Length = 335

 Score =  265 bits (678), Expect = 4e-69
 Identities = 120/133 (90%), Positives = 127/133 (95%)
 Frame = +3

Query: 42  RRKMESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFR 221
           +R+ME WDPNTKSTLTQIPLLTTKAGPRDGA WT RLKEEYKSLI YT MNKSNDNDWFR
Sbjct: 159 KREMEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKSLIAYTQMNKSNDNDWFR 218

Query: 222 ISAANPEGTKWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPELDGKTHKMYRGGK 401
           ISA+NPEGT+WTGKCWYV+NLLKYEFDLQFDIPVTYP+TAPELELP+LDGKT KMYRGGK
Sbjct: 219 ISASNPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGK 278

Query: 402 ICLTVHFKPLWAK 440
           ICLTVHFKPLWAK
Sbjct: 279 ICLTVHFKPLWAK 291


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